RNA–Protein interactions for RNA: YNL287W

SEC21, Transcript of Gamma subunit of coatomer, yeastyeast

Gene SEC21, Length 2,808 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC21YNL287W YPL150WQ12152 901 aa1.3□□□□□ -2.2
SEC21YNL287W PKH2Q12236 1081 aaKnown RBP1.3□□□□□ -2.2
SEC21YNL287W WTM1Q12363 437 aaKnown RBP1.3□□□□□ -2.2
SEC21YNL287W YRF1-2P40105 1681 aa1.29□□□□□ -2.2
SEC21YNL287W RPO31P04051 1460 aa1.29□□□□□ -2.2
SEC21YNL287W ADH2P00331 348 aaKnown RBP1.29□□□□□ -2.2
SEC21YNL287W MES1P00958 751 aaKnown RBP1.29□□□□□ -2.2
SEC21YNL287W HTB1P02293 131 aaKnown RBP1.29□□□□□ -2.2
SEC21YNL287W HTB2P02294 131 aa1.29□□□□□ -2.2
SEC21YNL287W CDC21P06785 304 aa1.29□□□□□ -2.2
SEC21YNL287W MET2P08465 486 aa1.29□□□□□ -2.2
SEC21YNL287W MRP13P12686 339 aa1.29□□□□□ -2.2
SEC21YNL287W PMR1P13586 950 aa1.29□□□□□ -2.2
SEC21YNL287W RPL3P14126 387 aaKnown RBP1.29□□□□□ -2.2
SEC21YNL287W NSP1P14907 823 aaKnown RBP1.29□□□□□ -2.2
SEC21YNL287W RNR3P21672 869 aaKnown RBP1.29□□□□□ -2.2
SEC21YNL287W AIM17P23180 465 aaKnown RBP1.29□□□□□ -2.2
SEC21YNL287W RNA15P25299 296 aaPredicted RBP1.29□□□□□ -2.2
SEC21YNL287W ADH7P25377 361 aa1.29□□□□□ -2.2
SEC21YNL287W CSM1P25651 190 aa1.29□□□□□ -2.2
SEC21YNL287W RFA3P26755 122 aaKnown RBP1.29□□□□□ -2.2
SEC21YNL287W CNE1P27825 502 aa1.29□□□□□ -2.2
SEC21YNL287W LAC1P28496 418 aa1.29□□□□□ -2.2
SEC21YNL287W IDH1P28834 360 aaKnown RBP RIP-Chip data1.29□□□□□ -2.2not detected
SEC21YNL287W NDC1P32500 655 aa1.29□□□□□ -2.2
SEC21YNL287W ECM25P32525 599 aa1.29□□□□□ -2.2
SEC21YNL287W GSP1P32835 219 aaKnown RBP1.29□□□□□ -2.2
SEC21YNL287W GSP2P32836 220 aaKnown RBP1.29□□□□□ -2.2
SEC21YNL287W LHP1P33399 275 aaKnown RBP1.29□□□□□ -2.2
SEC21YNL287W SOF1P33750 489 aaKnown RBP1.29□□□□□ -2.2
SEC21YNL287W CSG2P35206 410 aa1.29□□□□□ -2.2
SEC21YNL287W KES1P35844 434 aaKnown RBP1.29□□□□□ -2.2
SEC21YNL287W AUR1P36107 401 aaPredicted RBP1.29□□□□□ -2.2
SEC21YNL287W NTR2P36118 322 aaPredicted RBP1.29□□□□□ -2.2
SEC21YNL287W TVP38P36164 337 aa1.29□□□□□ -2.2
SEC21YNL287W YCR087C-AP37263 153 aa1.29□□□□□ -2.2
SEC21YNL287W PRS4P38063 326 aaPredicted RBP1.29□□□□□ -2.2
SEC21YNL287W YPT10P38146 199 aa1.29□□□□□ -2.2
SEC21YNL287W DER1P38307 211 aa1.29□□□□□ -2.2
SEC21YNL287W VHC1P38329 1120 aa1.29□□□□□ -2.2
SEC21YNL287W MIC12P38341 106 aa1.29□□□□□ -2.2
SEC21YNL287W PRS2P38620 318 aaKnown RBP1.29□□□□□ -2.2
SEC21YNL287W ATG7P38862 630 aa1.29□□□□□ -2.2
SEC21YNL287W SEO1P39709 593 aa1.29□□□□□ -2.2
SEC21YNL287W EXO1P39875 702 aa1.29□□□□□ -2.2
SEC21YNL287W COA1P40452 197 aa1.29□□□□□ -2.2
SEC21YNL287W SFH5P47008 294 aa1.29□□□□□ -2.2
SEC21YNL287W AIM22P47051 409 aa1.29□□□□□ -2.2
SEC21YNL287W RPC17P47076 161 aa1.29□□□□□ -2.2
SEC21YNL287W STE24P47154 453 aa1.29□□□□□ -2.2
SEC21YNL287W YGR149WP48236 432 aa1.29□□□□□ -2.2
SEC21YNL287W YGL036WP53185 909 aaPredicted RBP1.29□□□□□ -2.2
SEC21YNL287W GET1P53192 235 aa1.29□□□□□ -2.2
SEC21YNL287W SOL4P53315 255 aa1.29□□□□□ -2.2
SEC21YNL287W SCW4P53334 386 aaKnown RBP1.29□□□□□ -2.2
SEC21YNL287W ATP23P53722 227 aa1.29□□□□□ -2.2
SEC21YNL287W YLR460CP54007 376 aa1.29□□□□□ -2.2
SEC21YNL287W CWC27Q02770 301 aa1.29□□□□□ -2.2
SEC21YNL287W SHR3Q02774 210 aa1.29□□□□□ -2.2
SEC21YNL287W IZH1Q03419 316 aa1.29□□□□□ -2.2
SEC21YNL287W BCH1Q05029 724 aa1.29□□□□□ -2.2
SEC21YNL287W FAR10Q06001 478 aa1.29□□□□□ -2.2
SEC21YNL287W YLR407WQ06070 228 aa1.29□□□□□ -2.2
SEC21YNL287W VTA1Q06263 330 aa1.29□□□□□ -2.2
SEC21YNL287W BSP1Q06604 576 aa1.29□□□□□ -2.2
SEC21YNL287W LDB18Q07887 179 aa1.29□□□□□ -2.2
SEC21YNL287W YLR031WQ07978 186 aa1.29□□□□□ -2.2
SEC21YNL287W YLR036CQ07986 203 aa1.29□□□□□ -2.2
SEC21YNL287W SLF1Q12034 447 aaKnown RBP1.29□□□□□ -2.2
SEC21YNL287W PRS5Q12265 496 aaKnown RBP1.29□□□□□ -2.2
SEC21YNL287W BBP1Q12365 385 aa1.29□□□□□ -2.2
SEC21YNL287W NCA2Q12374 616 aa1.29□□□□□ -2.2
SEC21YNL287W PRP46Q12417 451 aaPredicted RBP1.29□□□□□ -2.2
SEC21YNL287W AGC1Q12482 902 aa1.29□□□□□ -2.2
SEC21YNL287W SNF8Q12483 233 aa1.29□□□□□ -2.2
SEC21YNL287W YLR361C-AQ3E795 98 aa1.29□□□□□ -2.2
SEC21YNL287W YDR157WA0A023PZE8 133 aa1.29□□□□□ -2.2
SEC21YNL287W URA3P03962 267 aa1.29□□□□□ -2.2
SEC21YNL287W GAL80P04387 435 aa1.29□□□□□ -2.2
SEC21YNL287W CHO2P05374 869 aaKnown RBP1.29□□□□□ -2.2
SEC21YNL287W PET54P10834 293 aa1.29□□□□□ -2.2
SEC21YNL287W NHP6AP11632 93 aaKnown RBP1.29□□□□□ -2.2
SEC21YNL287W URA6P15700 204 aa1.29□□□□□ -2.2
SEC21YNL287W ARG1P22768 420 aa1.29□□□□□ -2.2
SEC21YNL287W DCC1P25559 380 aa1.29□□□□□ -2.2
SEC21YNL287W YPS1P32329 569 aa1.29□□□□□ -2.2
SEC21YNL287W TFC1P32367 649 aa1.29□□□□□ -2.2
SEC21YNL287W PAD1P33751 242 aaKnown RBP RIP-Chip data1.29□□□□□ -2.2not detected
SEC21YNL287W SCO2P38072 301 aa1.29□□□□□ -2.2
SEC21YNL287W ZTA1P38230 334 aaKnown RBP1.29□□□□□ -2.2
SEC21YNL287W AIM2P39721 246 aa1.29□□□□□ -2.2
SEC21YNL287W LCP5P40079 357 aaPredicted RBP1.29□□□□□ -2.2
SEC21YNL287W BUR6P40096 142 aa1.29□□□□□ -2.2
SEC21YNL287W YNL194CP40169 301 aa1.29□□□□□ -2.2
SEC21YNL287W LAS21P40367 830 aa1.29□□□□□ -2.2
SEC21YNL287W STB1P42845 420 aa1.29□□□□□ -2.2
SEC21YNL287W YJL107CP42947 387 aa1.29□□□□□ -2.2
SEC21YNL287W SNO3P43544 222 aa1.29□□□□□ -2.2
SEC21YNL287W FMP32P43557 207 aa1.29□□□□□ -2.2
SEC21YNL287W MRX5P47007 382 aa1.29□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 34.7 ms