RNA–Protein interactions for RNA: YNL251C

NRD1, Transcript of RNA-binding subunit of Nrd1 complex, yeast

Gene NRD1, Length 1,728 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NRD1	YNL251C	ERD1	P16151	362 aa		4.96	□□□□□ -1.62
NRD1	YNL251C	CDC23	P16522	626 aa		4.96	□□□□□ -1.62
NRD1	YNL251C	APA1	P16550	321 aa	Known RBP	4.96	□□□□□ -1.62
NRD1	YNL251C	APN1	P22936	367 aa		4.96	□□□□□ -1.62
NRD1	YNL251C	PRE7	P23724	241 aa	Known RBP	4.96	□□□□□ -1.62
NRD1	YNL251C	STE50	P25344	346 aa		4.96	□□□□□ -1.62
NRD1	YNL251C	DCC1	P25559	380 aa		4.96	□□□□□ -1.62
NRD1	YNL251C	AHC2	P25649	128 aa		4.96	□□□□□ -1.62
NRD1	YNL251C	PRE4	P30657	266 aa		4.96	□□□□□ -1.62
NRD1	YNL251C	MRP20	P32387	263 aa		4.96	□□□□□ -1.62
NRD1	YNL251C	CDC12	P32468	407 aa	Known RBP	4.96	□□□□□ -1.62
NRD1	YNL251C	SEC17	P32602	292 aa		4.96	□□□□□ -1.62
NRD1	YNL251C	PMT1	P33775	817 aa		4.96	□□□□□ -1.62
NRD1	YNL251C	SHE2	P36068	246 aa	Known RBP RIP-Chip data	4.96	□□□□□ -1.62	not detected
NRD1	YNL251C	RTC2	P38279	296 aa		4.96	□□□□□ -1.62
NRD1	YNL251C	HTD2	P38790	280 aa	Known RBP	4.96	□□□□□ -1.62
NRD1	YNL251C	PZF1	P39933	429 aa		4.96	□□□□□ -1.62
NRD1	YNL251C	PIG2	P40187	538 aa		4.96	□□□□□ -1.62
NRD1	YNL251C	BMT5	P40493	336 aa		4.96	□□□□□ -1.62
NRD1	YNL251C	SNG1	P46950	547 aa		4.96	□□□□□ -1.62
NRD1	YNL251C	TIS11	P47977	285 aa		4.96	□□□□□ -1.62
NRD1	YNL251C	PHB2	P50085	310 aa		4.96	□□□□□ -1.62
NRD1	YNL251C	VPS73	P53142	486 aa	Known RBP	4.96	□□□□□ -1.62
NRD1	YNL251C	MTL1	P53214	551 aa		4.96	□□□□□ -1.62
NRD1	YNL251C	OCA2	P53949	197 aa		4.96	□□□□□ -1.62
NRD1	YNL251C	TPS1	Q00764	495 aa	Known RBP	4.96	□□□□□ -1.62
NRD1	YNL251C	LRS4	Q04087	347 aa	Known RBP	4.96	□□□□□ -1.62
NRD1	YNL251C	CRF1	Q04930	467 aa		4.96	□□□□□ -1.62
NRD1	YNL251C	VID22	Q05934	901 aa		4.96	□□□□□ -1.62
NRD1	YNL251C	ATG41	Q12048	136 aa		4.96	□□□□□ -1.62
NRD1	YNL251C	TY1A-NL1	Q12391	440 aa	Known RBP	4.96	□□□□□ -1.62
NRD1	YNL251C	HMS1	Q12398	434 aa		4.96	□□□□□ -1.62
NRD1	YNL251C	ERP3	Q12403	225 aa		4.96	□□□□□ -1.62
NRD1	YNL251C	MRX4	Q12467	430 aa		4.96	□□□□□ -1.62
NRD1	YNL251C	CTF3	Q12748	733 aa		4.96	□□□□□ -1.62
NRD1	YNL251C	YCL001W-B	Q96VH2	84 aa		4.96	□□□□□ -1.62
NRD1	YNL251C	RPL25	P04456	142 aa	Known RBP	4.95	□□□□□ -1.62
NRD1	YNL251C	HIS5	P07172	385 aa		4.95	□□□□□ -1.62
NRD1	YNL251C	MAS2	P11914	482 aa		4.95	□□□□□ -1.62
NRD1	YNL251C	GLK1	P17709	500 aa	Known RBP	4.95	□□□□□ -1.62
NRD1	YNL251C	YCL002C	P25565	263 aa		4.95	□□□□□ -1.62
NRD1	YNL251C	VPH1	P32563	840 aa	Known RBP	4.95	□□□□□ -1.62
NRD1	YNL251C	SUR1	P33300	382 aa		4.95	□□□□□ -1.62
NRD1	YNL251C	SPT10	P35208	640 aa		4.95	□□□□□ -1.62
NRD1	YNL251C	YCR087C-A	P37263	153 aa		4.95	□□□□□ -1.62
NRD1	YNL251C	AVT5	P38176	459 aa		4.95	□□□□□ -1.62
NRD1	YNL251C	ALG3	P38179	458 aa		4.95	□□□□□ -1.62
NRD1	YNL251C	SHE1	P38200	338 aa		4.95	□□□□□ -1.62
NRD1	YNL251C	COS111	P38308	924 aa		4.95	□□□□□ -1.62
NRD1	YNL251C	YHR122W	P38829	231 aa		4.95	□□□□□ -1.62
NRD1	YNL251C	POG1	P40473	351 aa		4.95	□□□□□ -1.62
NRD1	YNL251C	SDT1	P53078	280 aa		4.95	□□□□□ -1.62
NRD1	YNL251C	DUS1	P53759	423 aa	Known RBP	4.95	□□□□□ -1.62
NRD1	YNL251C	MEH1	Q02205	184 aa		4.95	□□□□□ -1.62
NRD1	YNL251C	MET31	Q03081	177 aa		4.95	□□□□□ -1.62
NRD1	YNL251C	MSC2	Q03455	724 aa		4.95	□□□□□ -1.62
NRD1	YNL251C	SSK1	Q07084	712 aa		4.95	□□□□□ -1.62
NRD1	YNL251C	YDR056C	Q12025	205 aa		4.95	□□□□□ -1.62
NRD1	YNL251C	PET9	P18239	318 aa	Known RBP	4.94	□□□□□ -1.62
NRD1	YNL251C	MRPL44	P19956	98 aa		4.94	□□□□□ -1.62
NRD1	YNL251C	HOP1	P20050	605 aa		4.94	□□□□□ -1.62
NRD1	YNL251C	PTP1	P25044	335 aa		4.94	□□□□□ -1.62
NRD1	YNL251C	BUB3	P26449	341 aa		4.94	□□□□□ -1.62
NRD1	YNL251C	YUR1	P26725	428 aa		4.94	□□□□□ -1.62
NRD1	YNL251C	LOT5	P34234	306 aa		4.94	□□□□□ -1.62
NRD1	YNL251C	ATG8	P38182	117 aa	RIP-Chip data	4.94	□□□□□ -1.62	not detected
NRD1	YNL251C	FUI1	P38196	639 aa		4.94	□□□□□ -1.62
NRD1	YNL251C	PEX32	P38292	413 aa		4.94	□□□□□ -1.62
NRD1	YNL251C	YHL041W	P38730	149 aa		4.94	□□□□□ -1.62
NRD1	YNL251C	GCV3	P39726	170 aa	Predicted RBP	4.94	□□□□□ -1.62
NRD1	YNL251C	RGI2	P40188	164 aa		4.94	□□□□□ -1.62
NRD1	YNL251C	TOK1	P40310	691 aa		4.94	□□□□□ -1.62
NRD1	YNL251C	DLD2	P46681	530 aa	Known RBP	4.94	□□□□□ -1.62
NRD1	YNL251C	DPB11	P47027	764 aa	Predicted RBP	4.94	□□□□□ -1.62
NRD1	YNL251C	MNT4	P53745	580 aa		4.94	□□□□□ -1.62
NRD1	YNL251C	YNR062C	P53748	327 aa		4.94	□□□□□ -1.62
NRD1	YNL251C	YSA1	Q01976	231 aa		4.94	□□□□□ -1.62
NRD1	YNL251C	SNO1	Q03144	224 aa		4.94	□□□□□ -1.62
NRD1	YNL251C	HED1	Q03937	162 aa		4.94	□□□□□ -1.62
NRD1	YNL251C	YDR387C	Q04162	555 aa		4.94	□□□□□ -1.62
NRD1	YNL251C	AIM32	Q04689	311 aa		4.94	□□□□□ -1.62
NRD1	YNL251C	CYK3	Q07533	885 aa		4.94	□□□□□ -1.62
NRD1	YNL251C	LDB18	Q07887	179 aa		4.94	□□□□□ -1.62
NRD1	YNL251C	THI73	Q07904	523 aa		4.94	□□□□□ -1.62
NRD1	YNL251C	YLR040C	Q07988	224 aa		4.94	□□□□□ -1.62
NRD1	YNL251C	DDC1	Q08949	612 aa		4.94	□□□□□ -1.62
NRD1	YNL251C	SPC3	Q12133	184 aa		4.94	□□□□□ -1.62
NRD1	YNL251C	TIR4	Q12218	487 aa	Predicted RBP	4.94	□□□□□ -1.62
NRD1	YNL251C	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	4.94	□□□□□ -1.62	not detected
NRD1	YNL251C	SFM1	Q12314	213 aa		4.94	□□□□□ -1.62
NRD1	YNL251C	ARP7	Q12406	477 aa		4.94	□□□□□ -1.62
NRD1	YNL251C	SET6	Q12529	373 aa		4.94	□□□□□ -1.62
NRD1	YNL251C	YLR099W-A	Q3E798	87 aa		4.94	□□□□□ -1.62
NRD1	YNL251C	FBP1	P09201	348 aa		4.94	□□□□□ -1.62
NRD1	YNL251C	SSA3	P09435	649 aa	Known RBP	4.94	□□□□□ -1.62
NRD1	YNL251C	HOM3	P10869	527 aa		4.94	□□□□□ -1.62
NRD1	YNL251C	NAM2	P11325	894 aa		4.94	□□□□□ -1.62
NRD1	YNL251C	ZRC1	P20107	442 aa		4.94	□□□□□ -1.62
NRD1	YNL251C	VMA16	P23968	213 aa		4.94	□□□□□ -1.62
NRD1	YNL251C	SUA5	P32579	426 aa		4.94	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 33.4 ms