RNA–Protein interactions for RNA: YNL232W

CSL4, Transcript of Exosome non-catalytic core component, yeast

Gene CSL4, Length 879 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CSL4	YNL232W	MTC6	P38849	526 aa		5.12	□□□□□ -1.59
CSL4	YNL232W	YHR177W	P38867	453 aa		5.12	□□□□□ -1.59
CSL4	YNL232W	UTP9	P38882	575 aa	Known RBP	5.12	□□□□□ -1.59
CSL4	YNL232W	YHB1	P39676	399 aa	Known RBP	5.12	□□□□□ -1.59
CSL4	YNL232W	PRE6	P40303	254 aa	Known RBP	5.12	□□□□□ -1.59
CSL4	YNL232W	RIC1	P40395	1056 aa		5.12	□□□□□ -1.59
CSL4	YNL232W	MET18	P40469	1032 aa		5.12	□□□□□ -1.59
CSL4	YNL232W	ARF3	P40994	183 aa	RIP-Chip data	5.12	□□□□□ -1.59	not detected
CSL4	YNL232W	MEP2	P41948	499 aa		5.12	□□□□□ -1.59
CSL4	YNL232W	FMP32	P43557	207 aa		5.12	□□□□□ -1.59
CSL4	YNL232W	YJR154W	P47181	346 aa		5.12	□□□□□ -1.59
CSL4	YNL232W	TAF6	P53040	516 aa		5.12	□□□□□ -1.59
CSL4	YNL232W	DUG3	P53871	357 aa		5.12	□□□□□ -1.59
CSL4	YNL232W	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	5.12	□□□□□ -1.59	not detected
CSL4	YNL232W	NCE101	Q02820	53 aa		5.12	□□□□□ -1.59
CSL4	YNL232W	RAD33	Q04231	177 aa		5.12	□□□□□ -1.59
CSL4	YNL232W	MSA1	Q08471	629 aa		5.12	□□□□□ -1.59
CSL4	YNL232W	GAL1	P04385	528 aa		5.11	□□□□□ -1.59
CSL4	YNL232W	TFS1	P14306	219 aa		5.11	□□□□□ -1.59
CSL4	YNL232W	KGD1	P20967	1014 aa	Known RBP	5.11	□□□□□ -1.59
CSL4	YNL232W	MDH2	P22133	377 aa		5.11	□□□□□ -1.59
CSL4	YNL232W	DBF20	P32328	564 aa		5.11	□□□□□ -1.59
CSL4	YNL232W	VPS41	P38959	992 aa		5.11	□□□□□ -1.59
CSL4	YNL232W	ECM10	P39987	644 aa		5.11	□□□□□ -1.59
CSL4	YNL232W	JEM1	P40358	645 aa		5.11	□□□□□ -1.59
CSL4	YNL232W	ZIP2	P53061	704 aa		5.11	□□□□□ -1.59
CSL4	YNL232W	OGG1	P53397	376 aa	Predicted RBP	5.11	□□□□□ -1.59
CSL4	YNL232W	APM1	Q00776	475 aa	Predicted RBP	5.11	□□□□□ -1.59
CSL4	YNL232W	USA1	Q03714	838 aa		5.11	□□□□□ -1.59
CSL4	YNL232W	BUR2	Q05949	395 aa		5.11	□□□□□ -1.59
CSL4	YNL232W	MLC2	Q06580	163 aa		5.11	□□□□□ -1.59
CSL4	YNL232W	SWA2	Q06677	668 aa		5.11	□□□□□ -1.59
CSL4	YNL232W	APC9	Q12107	265 aa		5.11	□□□□□ -1.59
CSL4	YNL232W	SIR3	P06701	978 aa		5.1	□□□□□ -1.59
CSL4	YNL232W	COS2	P0CX12	379 aa		5.1	□□□□□ -1.59
CSL4	YNL232W	COS3	P0CX13	379 aa		5.1	□□□□□ -1.59
CSL4	YNL232W	PDX1	P16451	410 aa		5.1	□□□□□ -1.59
CSL4	YNL232W	PET123	P17558	318 aa		5.1	□□□□□ -1.59
CSL4	YNL232W	DBF2	P22204	572 aa		5.1	□□□□□ -1.59
CSL4	YNL232W	OCA4	P25366	362 aa		5.1	□□□□□ -1.59
CSL4	YNL232W	PBN1	P25580	416 aa		5.1	□□□□□ -1.59
CSL4	YNL232W	SSO1	P32867	290 aa		5.1	□□□□□ -1.59
CSL4	YNL232W	ARC19	P33204	171 aa	Known RBP	5.1	□□□□□ -1.59
CSL4	YNL232W	COS111	P38308	924 aa		5.1	□□□□□ -1.59
CSL4	YNL232W	ANS1	P38832	159 aa		5.1	□□□□□ -1.59
CSL4	YNL232W	OAF1	P39720	1047 aa	Predicted RBP	5.1	□□□□□ -1.59
CSL4	YNL232W	SHO1	P40073	367 aa		5.1	□□□□□ -1.59
CSL4	YNL232W	YNL208W	P40159	199 aa	Known RBP	5.1	□□□□□ -1.59
CSL4	YNL232W	COS4	P43542	379 aa		5.1	□□□□□ -1.59
CSL4	YNL232W	RPS12	P48589	143 aa	Known RBP	5.1	□□□□□ -1.59
CSL4	YNL232W	YAP1802	P53309	568 aa		5.1	□□□□□ -1.59
CSL4	YNL232W	BIO4	P53630	237 aa		5.1	□□□□□ -1.59
CSL4	YNL232W	YPL071C	Q02864	156 aa		5.1	□□□□□ -1.59
CSL4	YNL232W	YDR514C	Q04408	483 aa		5.1	□□□□□ -1.59
CSL4	YNL232W	GMC2	Q06201	188 aa		5.1	□□□□□ -1.59
CSL4	YNL232W	ATG34	Q12292	412 aa		5.1	□□□□□ -1.59
CSL4	YNL232W	RPL15A	P05748	204 aa	Known RBP	5.09	□□□□□ -1.59
CSL4	YNL232W	CBS1	P14066	229 aa		5.09	□□□□□ -1.59
CSL4	YNL232W	DAL80	P26343	269 aa		5.09	□□□□□ -1.59
CSL4	YNL232W	RPB9	P27999	122 aa		5.09	□□□□□ -1.59
CSL4	YNL232W	HIR2	P32480	875 aa		5.09	□□□□□ -1.59
CSL4	YNL232W	PHO89	P38361	574 aa		5.09	□□□□□ -1.59
CSL4	YNL232W	CCT4	P39078	528 aa	Known RBP	5.09	□□□□□ -1.59
CSL4	YNL232W	RLP7	P40693	322 aa	Known RBP	5.09	□□□□□ -1.59
CSL4	YNL232W	GPG1	P53130	126 aa		5.09	□□□□□ -1.59
CSL4	YNL232W	GTR2	P53290	341 aa		5.09	□□□□□ -1.59
CSL4	YNL232W	RPL15B	P54780	204 aa	Predicted RBP	5.09	□□□□□ -1.59
CSL4	YNL232W	INP1	Q03694	420 aa		5.09	□□□□□ -1.59
CSL4	YNL232W	MRPL1	Q04599	285 aa		5.09	□□□□□ -1.59
CSL4	YNL232W	YMR310C	Q04867	317 aa	Predicted RBP	5.09	□□□□□ -1.59
CSL4	YNL232W	DBP9	Q06218	594 aa	Known RBP	5.09	□□□□□ -1.59
CSL4	YNL232W	YOL019W	Q08157	551 aa		5.09	□□□□□ -1.59
CSL4	YNL232W	RIO1	Q12196	484 aa	Known RBP	5.09	□□□□□ -1.59
CSL4	YNL232W	YPR096C	O13587	100 aa		5.08	□□□□□ -1.6
CSL4	YNL232W	NMT1	P14743	455 aa		5.08	□□□□□ -1.6
CSL4	YNL232W	NUP1	P20676	1076 aa		5.08	□□□□□ -1.6
CSL4	YNL232W	SAN1	P22470	610 aa		5.08	□□□□□ -1.6
CSL4	YNL232W	ROX1	P25042	368 aa		5.08	□□□□□ -1.6
CSL4	YNL232W	RPL5	P26321	297 aa	Known RBP	5.08	□□□□□ -1.6
CSL4	YNL232W	CYS4	P32582	507 aa	Known RBP	5.08	□□□□□ -1.6
CSL4	YNL232W	LOS1	P33418	1100 aa	Predicted RBP	5.08	□□□□□ -1.6
CSL4	YNL232W	NIC96	P34077	839 aa		5.08	□□□□□ -1.6
CSL4	YNL232W	BYE1	P36106	594 aa		5.08	□□□□□ -1.6
CSL4	YNL232W	MRPL39	P36533	70 aa		5.08	□□□□□ -1.6
CSL4	YNL232W	NSG1	P38837	291 aa		5.08	□□□□□ -1.6
CSL4	YNL232W	YJL193W	P39542	402 aa		5.08	□□□□□ -1.6
CSL4	YNL232W	ARB1	P40024	610 aa	Known RBP	5.08	□□□□□ -1.6
CSL4	YNL232W	RTT105	P40063	208 aa		5.08	□□□□□ -1.6
CSL4	YNL232W	SCS2	P40075	244 aa	Known RBP	5.08	□□□□□ -1.6
CSL4	YNL232W	IDP2	P41939	412 aa		5.08	□□□□□ -1.6
CSL4	YNL232W	YFR054C	P43622	192 aa		5.08	□□□□□ -1.6
CSL4	YNL232W	MTL1	P53214	551 aa		5.08	□□□□□ -1.6
CSL4	YNL232W	MNT4	P53745	580 aa		5.08	□□□□□ -1.6
CSL4	YNL232W	RHO5	P53879	331 aa	Known RBP	5.08	□□□□□ -1.6
CSL4	YNL232W	IGO1	P53897	168 aa		5.08	□□□□□ -1.6
CSL4	YNL232W	SWP1	Q02795	286 aa		5.08	□□□□□ -1.6
CSL4	YNL232W	SNX41	Q04053	625 aa		5.08	□□□□□ -1.6
CSL4	YNL232W	PSY3	Q12318	242 aa		5.08	□□□□□ -1.6
CSL4	YNL232W	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	5.08	□□□□□ -1.6	not detected
CSL4	YNL232W	YER145C-A	A0A023PYF4	145 aa		5.07	□□□□□ -1.6

Retrieved 100 of 5,963 RNA–protein pairs in 29.4 ms