RNA–Protein interactions for RNA: YNL079C

TPM1, Transcript of Major isoform of tropomyosin, yeast

Gene TPM1, Length 600 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TPM1	YNL079C	SCH9	P11792	824 aa	Known RBP	3.31	□□□□□ -1.88
TPM1	YNL079C	YAK1	P14680	807 aa		3.31	□□□□□ -1.88
TPM1	YNL079C	ATP10	P18496	279 aa		3.31	□□□□□ -1.88
TPM1	YNL079C	CLB3	P24870	427 aa		3.31	□□□□□ -1.88
TPM1	YNL079C	RBK1	P25332	333 aa		3.31	□□□□□ -1.88
TPM1	YNL079C	IDH2	P28241	369 aa	Known RBP	3.31	□□□□□ -1.88
TPM1	YNL079C	TFC1	P32367	649 aa		3.31	□□□□□ -1.88
TPM1	YNL079C	SKT5	P34226	696 aa		3.31	□□□□□ -1.88
TPM1	YNL079C	PTC1	P35182	281 aa		3.31	□□□□□ -1.88
TPM1	YNL079C	LDB7	P38210	180 aa		3.31	□□□□□ -1.88
TPM1	YNL079C	ALG8	P40351	577 aa		3.31	□□□□□ -1.88
TPM1	YNL079C	HPM1	P40481	377 aa		3.31	□□□□□ -1.88
TPM1	YNL079C	FMP33	P46998	180 aa		3.31	□□□□□ -1.88
TPM1	YNL079C	GWT1	P47026	490 aa		3.31	□□□□□ -1.88
TPM1	YNL079C	EFM5	P53200	248 aa	Known RBP	3.31	□□□□□ -1.88
TPM1	YNL079C	GTR2	P53290	341 aa		3.31	□□□□□ -1.88
TPM1	YNL079C	IBD2	P53892	351 aa		3.31	□□□□□ -1.88
TPM1	YNL079C	GOT1	Q03554	138 aa		3.31	□□□□□ -1.88
TPM1	YNL079C	GAS3	Q03655	524 aa		3.31	□□□□□ -1.88
TPM1	YNL079C	TAF12	Q03761	539 aa		3.31	□□□□□ -1.88
TPM1	YNL079C	DYN3	Q04949	312 aa		3.31	□□□□□ -1.88
TPM1	YNL079C	HEL2	Q05580	639 aa	Known RBP	3.31	□□□□□ -1.88
TPM1	YNL079C	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	3.31	□□□□□ -1.88	not detected
TPM1	YNL079C	PEX11	Q12462	236 aa		3.31	□□□□□ -1.88
TPM1	YNL079C	YBR298C-A	Q8TGK4	73 aa		3.31	□□□□□ -1.88
TPM1	YNL079C	UBR2	Q07963	1872 aa		3.3	□□□□□ -1.88
TPM1	YNL079C	ATP6	P00854	259 aa		3.3	□□□□□ -1.88
TPM1	YNL079C	LEU4	P06208	619 aa	Known RBP	3.3	□□□□□ -1.88
TPM1	YNL079C	HIP1	P06775	603 aa		3.3	□□□□□ -1.88
TPM1	YNL079C	PHO2	P07269	559 aa		3.3	□□□□□ -1.88
TPM1	YNL079C	RPL20A	P0CX23	172 aa	Known RBP	3.3	□□□□□ -1.88
TPM1	YNL079C	RPL20B	P0CX24	172 aa	Predicted RBP	3.3	□□□□□ -1.88
TPM1	YNL079C	URA4	P20051	364 aa		3.3	□□□□□ -1.88
TPM1	YNL079C	DAL81	P21657	970 aa		3.3	□□□□□ -1.88
TPM1	YNL079C	MCK1	P21965	375 aa	Known RBP	3.3	□□□□□ -1.88
TPM1	YNL079C	DBR1	P24309	405 aa	Known RBP	3.3	□□□□□ -1.88
TPM1	YNL079C	CSM1	P25651	190 aa		3.3	□□□□□ -1.88
TPM1	YNL079C	BUB2	P26448	306 aa	Predicted RBP	3.3	□□□□□ -1.88
TPM1	YNL079C	YIM1	P28625	365 aa		3.3	□□□□□ -1.88
TPM1	YNL079C	DPH5	P32469	300 aa	Predicted RBP	3.3	□□□□□ -1.88
TPM1	YNL079C	CSE1	P33307	960 aa		3.3	□□□□□ -1.88
TPM1	YNL079C	HCS1	P34243	683 aa		3.3	□□□□□ -1.88
TPM1	YNL079C	AST1	P35183	429 aa		3.3	□□□□□ -1.88
TPM1	YNL079C	PMU1	P36069	295 aa		3.3	□□□□□ -1.88
TPM1	YNL079C	STB6	P36085	766 aa		3.3	□□□□□ -1.88
TPM1	YNL079C	TUL1	P36096	758 aa		3.3	□□□□□ -1.88
TPM1	YNL079C	CBP4	P37267	147 aa		3.3	□□□□□ -1.88
TPM1	YNL079C	PDX3	P38075	228 aa	Known RBP	3.3	□□□□□ -1.88
TPM1	YNL079C	EFM1	P38732	585 aa		3.3	□□□□□ -1.88
TPM1	YNL079C	YHR045W	P38775	560 aa		3.3	□□□□□ -1.88
TPM1	YNL079C	PAN6	P40459	309 aa		3.3	□□□□□ -1.88
TPM1	YNL079C	ELP2	P42935	788 aa		3.3	□□□□□ -1.88
TPM1	YNL079C	YDL186W	P48568	277 aa		3.3	□□□□□ -1.88
TPM1	YNL079C	RMD9	P53140	646 aa	Known RBP	3.3	□□□□□ -1.88
TPM1	YNL079C	YGR016W	P53209	190 aa		3.3	□□□□□ -1.88
TPM1	YNL079C	CLD1	P53264	445 aa		3.3	□□□□□ -1.88
TPM1	YNL079C	YNL143C	P53908	130 aa		3.3	□□□□□ -1.88
TPM1	YNL079C	SPC2	Q04969	178 aa		3.3	□□□□□ -1.88
TPM1	YNL079C	YPR114W	Q06107	315 aa		3.3	□□□□□ -1.88
TPM1	YNL079C	GGA1	Q06336	557 aa		3.3	□□□□□ -1.88
TPM1	YNL079C	ASA1	Q06822	443 aa		3.3	□□□□□ -1.88
TPM1	YNL079C	SGT1	Q08446	395 aa		3.3	□□□□□ -1.88
TPM1	YNL079C	PPT2	Q12036	173 aa		3.3	□□□□□ -1.88
TPM1	YNL079C	NSL1	Q12143	216 aa		3.3	□□□□□ -1.88
TPM1	YNL079C	YLR046C	Q12253	270 aa		3.3	□□□□□ -1.88
TPM1	YNL079C	ADF1	Q2V2Q1	113 aa		3.3	□□□□□ -1.88
TPM1	YNL079C	SAS5	Q99314	248 aa		3.3	□□□□□ -1.88
TPM1	YNL079C	YLR422W	Q06409	1932 aa		3.3	□□□□□ -1.88
TPM1	YNL079C	GDH1	P07262	454 aa	Known RBP	3.29	□□□□□ -1.88
TPM1	YNL079C	COS2	P0CX12	379 aa		3.29	□□□□□ -1.88
TPM1	YNL079C	COS3	P0CX13	379 aa		3.29	□□□□□ -1.88
TPM1	YNL079C	ATR1	P13090	542 aa		3.29	□□□□□ -1.88
TPM1	YNL079C	ARF2	P19146	181 aa	Known RBP	3.29	□□□□□ -1.88
TPM1	YNL079C	MNE1	P24720	663 aa		3.29	□□□□□ -1.88
TPM1	YNL079C	PEX34	P25584	144 aa		3.29	□□□□□ -1.88
TPM1	YNL079C	GEX1	P25596	615 aa		3.29	□□□□□ -1.88
TPM1	YNL079C	PHO91	P27514	894 aa		3.29	□□□□□ -1.88
TPM1	YNL079C	ATP7	P30902	174 aa		3.29	□□□□□ -1.88
TPM1	YNL079C	RML2	P32611	393 aa		3.29	□□□□□ -1.88
TPM1	YNL079C	FRE2	P36033	711 aa		3.29	□□□□□ -1.88
TPM1	YNL079C	MEP1	P40260	492 aa		3.29	□□□□□ -1.88
TPM1	YNL079C	GVP36	P40531	326 aa	Known RBP	3.29	□□□□□ -1.88
TPM1	YNL079C	YJL213W	P40896	331 aa		3.29	□□□□□ -1.88
TPM1	YNL079C	SEC27	P41811	889 aa	Known RBP	3.29	□□□□□ -1.88
TPM1	YNL079C	YRB1	P41920	201 aa	Known RBP	3.29	□□□□□ -1.88
TPM1	YNL079C	COS4	P43542	379 aa		3.29	□□□□□ -1.88
TPM1	YNL079C	AIM23	P47015	356 aa		3.29	□□□□□ -1.88
TPM1	YNL079C	GET1	P53192	235 aa		3.29	□□□□□ -1.88
TPM1	YNL079C	SHY1	P53266	389 aa		3.29	□□□□□ -1.88
TPM1	YNL079C	PRP38	Q00723	242 aa	Predicted RBP	3.29	□□□□□ -1.88
TPM1	YNL079C	PIR1	Q03178	341 aa		3.29	□□□□□ -1.88
TPM1	YNL079C	ARX1	Q03862	593 aa	Known RBP	3.29	□□□□□ -1.88
TPM1	YNL079C	TRM12	Q04235	462 aa		3.29	□□□□□ -1.88
TPM1	YNL079C	HSP31	Q04432	237 aa		3.29	□□□□□ -1.88
TPM1	YNL079C	RTT103	Q05543	409 aa		3.29	□□□□□ -1.88
TPM1	YNL079C	YTH1	Q06102	208 aa	Predicted RBP	3.29	□□□□□ -1.88
TPM1	YNL079C	RIF2	Q06208	395 aa		3.29	□□□□□ -1.88
TPM1	YNL079C	YLR413W	Q06689	675 aa		3.29	□□□□□ -1.88
TPM1	YNL079C	UAF30	Q08747	228 aa		3.29	□□□□□ -1.88
TPM1	YNL079C	MUM3	Q08750	479 aa		3.29	□□□□□ -1.88

Retrieved 100 of 5,963 RNA–protein pairs in 17.1 ms