RNA–Protein interactions for RNA: YNL022C

RCM1, Transcript of rRNA m5C methyltransferase, yeast

Gene RCM1, Length 1,473 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RCM1	YNL022C	YMR209C	Q03648	457 aa		4.08	□□□□□ -1.76
RCM1	YNL022C	EKI1	Q03764	534 aa		4.08	□□□□□ -1.76
RCM1	YNL022C	SWF1	Q04629	336 aa		4.08	□□□□□ -1.76
RCM1	YNL022C	SMA2	Q04658	369 aa		4.08	□□□□□ -1.76
RCM1	YNL022C	GRX8	Q05926	109 aa		4.08	□□□□□ -1.76
RCM1	YNL022C	BOP2	Q06150	570 aa		4.08	□□□□□ -1.76
RCM1	YNL022C	RKM1	Q08961	583 aa	Predicted RBP	4.08	□□□□□ -1.76
RCM1	YNL022C	NCE102	Q12207	173 aa	RIP-Chip data	4.08	□□□□□ -1.76	not detected
RCM1	YNL022C	OCA6	Q12454	224 aa		4.08	□□□□□ -1.76
RCM1	YNL022C	YMR030W-A	Q3E760	96 aa		4.08	□□□□□ -1.76
RCM1	YNL022C	RAD3	P06839	778 aa		4.07	□□□□□ -1.76
RCM1	YNL022C	HSP26	P15992	214 aa	Known RBP RIP-Chip data	4.07	□□□□□ -1.76	not detected
RCM1	YNL022C	COQ3	P27680	312 aa		4.07	□□□□□ -1.76
RCM1	YNL022C	FUN19	P28003	413 aa	Predicted RBP	4.07	□□□□□ -1.76
RCM1	YNL022C	ERG1	P32476	496 aa	Known RBP	4.07	□□□□□ -1.76
RCM1	YNL022C	PHO89	P38361	574 aa		4.07	□□□□□ -1.76
RCM1	YNL022C	LAG1	P38703	411 aa		4.07	□□□□□ -1.76
RCM1	YNL022C	YHI9	P38765	294 aa		4.07	□□□□□ -1.76
RCM1	YNL022C	STN1	P38960	494 aa		4.07	□□□□□ -1.76
RCM1	YNL022C	VPS25	P47142	202 aa		4.07	□□□□□ -1.76
RCM1	YNL022C	IDP3	P53982	420 aa	Known RBP	4.07	□□□□□ -1.76
RCM1	YNL022C	ERG13	P54839	491 aa	Known RBP	4.07	□□□□□ -1.76
RCM1	YNL022C	ENT5	Q03769	411 aa	Known RBP	4.07	□□□□□ -1.76
RCM1	YNL022C	YLR173W	Q06247	608 aa		4.07	□□□□□ -1.76
RCM1	YNL022C	YLR177W	Q06251	628 aa		4.07	□□□□□ -1.76
RCM1	YNL022C	YOR365C	Q08844	703 aa		4.07	□□□□□ -1.76
RCM1	YNL022C	MED4	Q12343	284 aa		4.07	□□□□□ -1.76
RCM1	YNL022C	UBR1	P19812	1950 aa		4.07	□□□□□ -1.76
RCM1	YNL022C	YPR089W	O13585	888 aa		4.06	□□□□□ -1.76
RCM1	YNL022C	MES1	P00958	751 aa	Known RBP	4.06	□□□□□ -1.76
RCM1	YNL022C	RAD52	P06778	471 aa	Known RBP	4.06	□□□□□ -1.76
RCM1	YNL022C	CDC21	P06785	304 aa		4.06	□□□□□ -1.76
RCM1	YNL022C	CNA1	P23287	553 aa		4.06	□□□□□ -1.76
RCM1	YNL022C	RPC19	P28000	142 aa	Known RBP	4.06	□□□□□ -1.76
RCM1	YNL022C	PRP21	P32524	280 aa	Predicted RBP	4.06	□□□□□ -1.76
RCM1	YNL022C	NRP1	P32770	719 aa	Known RBP RIP-Chip data	4.06	□□□□□ -1.76	not detected
RCM1	YNL022C	SOR1	P35497	357 aa	Known RBP	4.06	□□□□□ -1.76
RCM1	YNL022C	RIM2	P38127	377 aa		4.06	□□□□□ -1.76
RCM1	YNL022C	ECM13	P38195	257 aa		4.06	□□□□□ -1.76
RCM1	YNL022C	MSS2	P40990	351 aa		4.06	□□□□□ -1.76
RCM1	YNL022C	RTT101	P47050	842 aa		4.06	□□□□□ -1.76
RCM1	YNL022C	BUD32	P53323	261 aa		4.06	□□□□□ -1.76
RCM1	YNL022C	MNT4	P53745	580 aa		4.06	□□□□□ -1.76
RCM1	YNL022C	YIF1	P53845	314 aa	Known RBP	4.06	□□□□□ -1.76
RCM1	YNL022C	PET117	Q02771	107 aa		4.06	□□□□□ -1.76
RCM1	YNL022C	HSP31	Q04432	237 aa		4.06	□□□□□ -1.76
RCM1	YNL022C	SPC24	Q04477	213 aa		4.06	□□□□□ -1.76
RCM1	YNL022C	CDC123	Q05791	360 aa		4.06	□□□□□ -1.76
RCM1	YNL022C	IPK1	Q06667	281 aa		4.06	□□□□□ -1.76
RCM1	YNL022C	SSK1	Q07084	712 aa		4.06	□□□□□ -1.76
RCM1	YNL022C	YDL218W	Q07629	317 aa		4.06	□□□□□ -1.76
RCM1	YNL022C	SOR2	Q07786	357 aa		4.06	□□□□□ -1.76
RCM1	YNL022C	GSH2	Q08220	491 aa		4.06	□□□□□ -1.76
RCM1	YNL022C	YOR387C	Q08910	206 aa		4.06	□□□□□ -1.76
RCM1	YNL022C	APC9	Q12107	265 aa		4.06	□□□□□ -1.76
RCM1	YNL022C	RUP1	Q12242	671 aa		4.06	□□□□□ -1.76
RCM1	YNL022C	RGS2	Q99188	309 aa		4.06	□□□□□ -1.76
RCM1	YNL022C	RSR1	P13856	272 aa		4.05	□□□□□ -1.76
RCM1	YNL022C	GCY1	P14065	312 aa	Known RBP RIP-Chip data	4.05	□□□□□ -1.76	not detected
RCM1	YNL022C	PHA2	P32452	334 aa		4.05	□□□□□ -1.76
RCM1	YNL022C	ACP1	P32463	125 aa		4.05	□□□□□ -1.76
RCM1	YNL022C	YKL070W	P36087	169 aa		4.05	□□□□□ -1.76
RCM1	YNL022C	ATP3	P38077	311 aa	Known RBP	4.05	□□□□□ -1.76
RCM1	YNL022C	YHR045W	P38775	560 aa		4.05	□□□□□ -1.76
RCM1	YNL022C	RRP4	P38792	359 aa	Known RBP	4.05	□□□□□ -1.76
RCM1	YNL022C	SEO1	P39709	593 aa		4.05	□□□□□ -1.76
RCM1	YNL022C	SYG1	P40528	902 aa		4.05	□□□□□ -1.76
RCM1	YNL022C	UFE1	P41834	346 aa		4.05	□□□□□ -1.76
RCM1	YNL022C	YFL040W	P43562	540 aa		4.05	□□□□□ -1.76
RCM1	YNL022C	YJR011C	P47086	261 aa	Predicted RBP	4.05	□□□□□ -1.76
RCM1	YNL022C	RLI1	Q03195	608 aa	Known RBP	4.05	□□□□□ -1.76
RCM1	YNL022C	MRPS17	Q03246	237 aa	Predicted RBP	4.05	□□□□□ -1.76
RCM1	YNL022C	RIM13	Q03792	727 aa		4.05	□□□□□ -1.76
RCM1	YNL022C	RRP17	Q04031	235 aa	Predicted RBP	4.05	□□□□□ -1.76
RCM1	YNL022C	ARP10	Q04549	284 aa		4.05	□□□□□ -1.76
RCM1	YNL022C	GTO3	Q04806	366 aa		4.05	□□□□□ -1.76
RCM1	YNL022C	MDM30	Q05930	598 aa		4.05	□□□□□ -1.76
RCM1	YNL022C	LOT6	Q07923	191 aa		4.05	□□□□□ -1.76
RCM1	YNL022C	PEX27	Q08580	376 aa		4.05	□□□□□ -1.76
RCM1	YNL022C	NOT5	Q12514	560 aa	Predicted RBP	4.05	□□□□□ -1.76
RCM1	YNL022C	NFT1	P0CE68	1218 aa		4.05	□□□□□ -1.76
RCM1	YNL022C	PET18	P25362	215 aa		4.05	□□□□□ -1.76
RCM1	YNL022C	SNC1	P31109	117 aa		4.05	□□□□□ -1.76
RCM1	YNL022C	ATP11	P32453	318 aa		4.05	□□□□□ -1.76
RCM1	YNL022C	APE2	P32454	952 aa	Known RBP	4.05	□□□□□ -1.76
RCM1	YNL022C	CYS4	P32582	507 aa	Known RBP	4.05	□□□□□ -1.76
RCM1	YNL022C	ATG12	P38316	186 aa		4.05	□□□□□ -1.76
RCM1	YNL022C	GPI16	P38875	610 aa		4.05	□□□□□ -1.76
RCM1	YNL022C	PAC11	P40960	533 aa		4.05	□□□□□ -1.76
RCM1	YNL022C	LOC1	P43586	204 aa	Predicted RBP	4.05	□□□□□ -1.76
RCM1	YNL022C	ABM1	P47146	123 aa		4.05	□□□□□ -1.76
RCM1	YNL022C	YJR154W	P47181	346 aa		4.05	□□□□□ -1.76
RCM1	YNL022C	PRP24	P49960	444 aa	Known RBP	4.05	□□□□□ -1.76
RCM1	YNL022C	YGL114W	P53134	725 aa		4.05	□□□□□ -1.76
RCM1	YNL022C	USE1	P53146	245 aa		4.05	□□□□□ -1.76
RCM1	YNL022C	CDC14	Q00684	551 aa		4.05	□□□□□ -1.76
RCM1	YNL022C	YPL014W	Q02606	381 aa		4.05	□□□□□ -1.76
RCM1	YNL022C	RSC9	Q03124	581 aa		4.05	□□□□□ -1.76
RCM1	YNL022C	FMN1	Q03778	218 aa		4.05	□□□□□ -1.76
RCM1	YNL022C	TVP15	Q03860	143 aa		4.05	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 22.1 ms