RNA–Protein interactions for RNA: YML046W

PRP39, Transcript of U1 snRNP protein involved in splicing, yeastyeast

Gene PRP39, Length 1,890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP39YML046W TOA1P32773 286 aa0.38□□□□□ -2.35
PRP39YML046W COY1P34237 679 aa0.38□□□□□ -2.35
PRP39YML046W COS9P36034 407 aa0.38□□□□□ -2.35
PRP39YML046W NTC20P38302 140 aaPredicted RBP0.38□□□□□ -2.35
PRP39YML046W JEM1P40358 645 aa0.38□□□□□ -2.35
PRP39YML046W MNN5P46982 586 aa0.38□□□□□ -2.35
PRP39YML046W SPR6Q01684 191 aa0.38□□□□□ -2.35
PRP39YML046W IRC4Q03036 179 aa0.38□□□□□ -2.35
PRP39YML046W RRP45Q05636 305 aaKnown RBP0.38□□□□□ -2.35
PRP39YML046W COG4Q06096 861 aa0.38□□□□□ -2.35
PRP39YML046W YDL211CQ12121 372 aa0.38□□□□□ -2.35
PRP39YML046W VAM3Q12241 283 aa0.38□□□□□ -2.35
PRP39YML046W YIL046W-AQ3E7Z4 54 aa0.38□□□□□ -2.35
PRP39YML046W FKS1P38631 1876 aaKnown RBP0.37□□□□□ -2.35
PRP39YML046W RPS18AP0CX55 146 aaKnown RBP0.37□□□□□ -2.35
PRP39YML046W RPS18BP0CX56 146 aaPredicted RBP0.37□□□□□ -2.35
PRP39YML046W URA4P20051 364 aa0.37□□□□□ -2.35
PRP39YML046W BRF1P29056 596 aa0.37□□□□□ -2.35
PRP39YML046W LDS1P31379 325 aa0.37□□□□□ -2.35
PRP39YML046W DBP7P36120 742 aaKnown RBP0.37□□□□□ -2.35
PRP39YML046W MMF1P40185 145 aaKnown RBP0.37□□□□□ -2.35
PRP39YML046W SEH1P53011 349 aaKnown RBP0.37□□□□□ -2.35
PRP39YML046W CWC22P53333 577 aaKnown RBP0.37□□□□□ -2.35
PRP39YML046W MRX11Q03079 207 aa0.37□□□□□ -2.35
PRP39YML046W URH1Q04179 340 aa0.37□□□□□ -2.35
PRP39YML046W YLR456WQ06199 204 aa0.37□□□□□ -2.35
PRP39YML046W RLP24Q07915 199 aaKnown RBP0.37□□□□□ -2.35
PRP39YML046W RRG1Q12167 365 aaPredicted RBP0.37□□□□□ -2.35
PRP39YML046W YAL067W-AQ8TGK6 75 aa0.37□□□□□ -2.35
PRP39YML046W GPI10P30777 616 aa0.37□□□□□ -2.35
PRP39YML046W SSH4P32343 579 aa0.37□□□□□ -2.35
PRP39YML046W ERG3P32353 365 aa0.37□□□□□ -2.35
PRP39YML046W MCM10P32354 571 aa0.37□□□□□ -2.35
PRP39YML046W HXT3P32466 567 aaKnown RBP0.37□□□□□ -2.35
PRP39YML046W SHE3P38272 425 aaKnown RBP0.37□□□□□ -2.35
PRP39YML046W NOP16P40007 231 aaKnown RBP0.37□□□□□ -2.35
PRP39YML046W UFE1P41834 346 aa0.37□□□□□ -2.35
PRP39YML046W BUD13P46947 266 aaPredicted RBP0.37□□□□□ -2.35
PRP39YML046W YDR131CQ03899 556 aa0.37□□□□□ -2.35
PRP39YML046W FSH2Q05015 223 aa0.37□□□□□ -2.35
PRP39YML046W YHC1Q05900 231 aaKnown RBP0.37□□□□□ -2.35
PRP39YML046W RKM1Q08961 583 aaPredicted RBP0.37□□□□□ -2.35
PRP39YML046W DUR1,2P32528 1835 aaKnown RBP0.37□□□□□ -2.35
PRP39YML046W IMA3P0CW40 589 aa0.36□□□□□ -2.35
PRP39YML046W IMA4P0CW41 589 aa0.36□□□□□ -2.35
PRP39YML046W AAC3P18238 307 aa0.36□□□□□ -2.35
PRP39YML046W ECM14P38836 430 aa0.36□□□□□ -2.35
PRP39YML046W VAB2P40003 282 aa0.36□□□□□ -2.35
PRP39YML046W YGL138CP53122 345 aa0.36□□□□□ -2.35
PRP39YML046W YPL113CQ02961 396 aa0.36□□□□□ -2.35
PRP39YML046W YDR114CQ04597 100 aa0.36□□□□□ -2.35
PRP39YML046W DIB1Q06819 143 aaPredicted RBP0.36□□□□□ -2.35
PRP39YML046W IMA2Q08295 589 aa0.36□□□□□ -2.35
PRP39YML046W SFM1Q12314 213 aa0.36□□□□□ -2.35
PRP39YML046W HIF1Q12373 385 aa0.36□□□□□ -2.35
PRP39YML046W RPS14AP06367 137 aaKnown RBP0.35□□□□□ -2.35
PRP39YML046W DAL82P21705 255 aa0.35□□□□□ -2.35
PRP39YML046W HSP104P31539 908 aaKnown RBP0.35□□□□□ -2.35
PRP39YML046W SPO23P33757 523 aa0.35□□□□□ -2.35
PRP39YML046W RPS14BP39516 138 aaKnown RBP0.35□□□□□ -2.35
PRP39YML046W BDH1P39714 382 aa0.35□□□□□ -2.35
PRP39YML046W NOC2P39744 710 aaKnown RBP0.35□□□□□ -2.35
PRP39YML046W VHS2P40463 436 aa0.35□□□□□ -2.35
PRP39YML046W CTK3P46963 296 aaPredicted RBP0.35□□□□□ -2.35
PRP39YML046W SHE4P51534 789 aa0.35□□□□□ -2.35
PRP39YML046W VAC7P53950 1165 aa0.35□□□□□ -2.35
PRP39YML046W RMI1Q02685 241 aa0.35□□□□□ -2.35
PRP39YML046W ADH6Q04894 360 aaKnown RBP0.35□□□□□ -2.35
PRP39YML046W YOL029CQ08187 201 aa0.35□□□□□ -2.35
PRP39YML046W PAB1P04147 577 aaKnown RBP RIP-Chip data0.35□□□□□ -2.35not detected
PRP39YML046W CUP2P15315 225 aa0.35□□□□□ -2.35
PRP39YML046W CLC1P17891 233 aa0.35□□□□□ -2.35
PRP39YML046W POL2P21951 2222 aaKnown RBP0.35□□□□□ -2.35
PRP39YML046W YKL102CP34249 101 aa0.35□□□□□ -2.35
PRP39YML046W YER079WP40052 210 aaKnown RBP0.35□□□□□ -2.35
PRP39YML046W TPM2P40414 161 aa0.35□□□□□ -2.35
PRP39YML046W MET18P40469 1032 aa0.35□□□□□ -2.35
PRP39YML046W SPO22P40511 975 aa0.35□□□□□ -2.35
PRP39YML046W COS5P47187 383 aa0.35□□□□□ -2.35
PRP39YML046W COS1P53822 381 aa0.35□□□□□ -2.35
PRP39YML046W COS7Q07788 383 aa0.35□□□□□ -2.35
PRP39YML046W CLP1Q08685 445 aaPredicted RBP0.35□□□□□ -2.35
PRP39YML046W RTN2Q12443 393 aa0.35□□□□□ -2.35
PRP39YML046W HKR1P41809 1802 aa0.34□□□□□ -2.35
PRP39YML046W DST1P07273 309 aa0.34□□□□□ -2.36
PRP39YML046W SSC1P0CS90 654 aaKnown RBP0.34□□□□□ -2.36
PRP39YML046W CPT1P17898 393 aa0.34□□□□□ -2.36
PRP39YML046W PWP2P25635 923 aaKnown RBP0.34□□□□□ -2.36
PRP39YML046W MPE1P35728 441 aaKnown RBP0.34□□□□□ -2.36
PRP39YML046W VPS24P36095 224 aaKnown RBP0.34□□□□□ -2.36
PRP39YML046W GPI16P38875 610 aa0.34□□□□□ -2.36
PRP39YML046W RCY1P39531 840 aa0.34□□□□□ -2.36
PRP39YML046W RBG1P39729 369 aa0.34□□□□□ -2.36
PRP39YML046W YPL080CQ02826 108 aa0.34□□□□□ -2.36
PRP39YML046W SLM3Q12093 417 aa0.34□□□□□ -2.36
PRP39YML046W MCT1Q12283 360 aa0.34□□□□□ -2.36
PRP39YML046W ADH3P07246 375 aaKnown RBP0.33□□□□□ -2.36
PRP39YML046W SSA3P09435 649 aaKnown RBP0.33□□□□□ -2.36
PRP39YML046W UNG1P12887 359 aa0.33□□□□□ -2.36
PRP39YML046W ALG1P16661 449 aa0.33□□□□□ -2.36
Retrieved 100 of 5,963 RNA–protein pairs in 43.7 ms