RNA–Protein interactions for RNA: YLR378C

SEC61, Transcript of Conserved ER protein translocation channel, yeastyeast

Gene SEC61, Length 1,443 nt, Biotype protein coding, Subcellular localisation Mitochondria, Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC61YLR378C MCM7P38132 845 aa8.42□□□□□ -1.06
SEC61YLR378C NVJ1P38881 321 aa8.42□□□□□ -1.06
SEC61YLR378C YNL195CP40168 261 aa8.42□□□□□ -1.06
SEC61YLR378C ASK10P48361 1146 aa8.42□□□□□ -1.06
SEC61YLR378C SAM37P50110 327 aa8.42□□□□□ -1.06
SEC61YLR378C YGR067CP53243 804 aa8.42□□□□□ -1.06
SEC61YLR378C YLR460CP54007 376 aa8.42□□□□□ -1.06
SEC61YLR378C NCE101Q02820 53 aa8.42□□□□□ -1.06
SEC61YLR378C RCF1Q03713 159 aa8.42□□□□□ -1.06
SEC61YLR378C SPC19Q03954 165 aa8.42□□□□□ -1.06
SEC61YLR378C SNT309Q06091 175 aaPredicted RBP8.42□□□□□ -1.06
SEC61YLR378C BAR1P12630 587 aa8.41□□□□□ -1.06
SEC61YLR378C CDC26P14724 124 aa8.41□□□□□ -1.06
SEC61YLR378C PHO80P20052 293 aa8.41□□□□□ -1.06
SEC61YLR378C FAA1P30624 700 aaKnown RBP8.41□□□□□ -1.06
SEC61YLR378C MKK2P32491 506 aa8.41□□□□□ -1.06
SEC61YLR378C MDL1P33310 695 aa8.41□□□□□ -1.06
SEC61YLR378C SCY1P53009 804 aa8.41□□□□□ -1.06
SEC61YLR378C YGL235WP53071 178 aa8.41□□□□□ -1.06
SEC61YLR378C GPI17Q04080 534 aa8.41□□□□□ -1.06
SEC61YLR378C SNO4Q04902 237 aa8.41□□□□□ -1.06
SEC61YLR378C HSP33Q08914 237 aaKnown RBP8.41□□□□□ -1.06
SEC61YLR378C GUP2Q08929 609 aa8.41□□□□□ -1.06
SEC61YLR378C HSP32Q08992 237 aa8.41□□□□□ -1.06
SEC61YLR378C DFG16Q99234 619 aa8.41□□□□□ -1.06
SEC61YLR378C RPN13O13563 156 aa8.4□□□□□ -1.06
SEC61YLR378C RAS1P01119 309 aa8.4□□□□□ -1.06
SEC61YLR378C SEC12P11655 471 aa8.4□□□□□ -1.06
SEC61YLR378C GLK1P17709 500 aaKnown RBP8.4□□□□□ -1.06
SEC61YLR378C ARO7P32178 256 aa8.4□□□□□ -1.06
SEC61YLR378C JEN1P36035 616 aa8.4□□□□□ -1.06
SEC61YLR378C EDS1P38073 919 aa8.4□□□□□ -1.06
SEC61YLR378C RTC2P38279 296 aa8.4□□□□□ -1.06
SEC61YLR378C FAA3P39002 694 aa8.4□□□□□ -1.06
SEC61YLR378C PCL6P40038 420 aa8.4□□□□□ -1.06
SEC61YLR378C FMC1P40491 155 aa8.4□□□□□ -1.06
SEC61YLR378C YIL067CP40514 678 aa8.4□□□□□ -1.06
SEC61YLR378C SPG5P42933 373 aa8.4□□□□□ -1.06
SEC61YLR378C QRI7P43122 407 aa8.4□□□□□ -1.06
SEC61YLR378C VPS73P53142 486 aaKnown RBP8.4□□□□□ -1.06
SEC61YLR378C DML1Q03652 475 aa8.4□□□□□ -1.06
SEC61YLR378C YMR315WQ04869 349 aaKnown RBP8.4□□□□□ -1.06
SEC61YLR378C YPR127WQ06494 345 aa8.4□□□□□ -1.06
SEC61YLR378C CDA2Q06703 312 aa8.4□□□□□ -1.06
SEC61YLR378C YOR289WQ12012 251 aaPredicted RBP8.4□□□□□ -1.06
SEC61YLR378C NPC2Q12408 173 aa8.4□□□□□ -1.06
SEC61YLR378C CDC31P06704 161 aaKnown RBP8.39□□□□□ -1.07
SEC61YLR378C YGL041W-AP0C5N3 154 aa8.39□□□□□ -1.07
SEC61YLR378C HOM3P10869 527 aa8.39□□□□□ -1.07
SEC61YLR378C ERD1P16151 362 aa8.39□□□□□ -1.07
SEC61YLR378C NAR1P23503 491 aaKnown RBP8.39□□□□□ -1.07
SEC61YLR378C HSP30P25619 332 aa8.39□□□□□ -1.07
SEC61YLR378C PMT2P31382 759 aa8.39□□□□□ -1.07
SEC61YLR378C TIM12P32830 109 aa8.39□□□□□ -1.07
SEC61YLR378C LST4P34239 828 aa8.39□□□□□ -1.07
SEC61YLR378C YBR063CP38083 404 aa8.39□□□□□ -1.07
SEC61YLR378C GPX2P38143 162 aa8.39□□□□□ -1.07
SEC61YLR378C SHE1P38200 338 aa8.39□□□□□ -1.07
SEC61YLR378C YHR210CP38893 341 aa8.39□□□□□ -1.07
SEC61YLR378C SHR5P41912 237 aa8.39□□□□□ -1.07
SEC61YLR378C STB1P42845 420 aa8.39□□□□□ -1.07
SEC61YLR378C DUG1P43616 481 aaKnown RBP8.39□□□□□ -1.07
SEC61YLR378C MDV1P47025 714 aa8.39□□□□□ -1.07
SEC61YLR378C YJR115WP47152 169 aa8.39□□□□□ -1.07
SEC61YLR378C PGA1P53896 198 aa8.39□□□□□ -1.07
SEC61YLR378C FDC1Q03034 503 aa8.39□□□□□ -1.07
SEC61YLR378C YMR210WQ03649 449 aa8.39□□□□□ -1.07
SEC61YLR378C PLM2Q04383 521 aa8.39□□□□□ -1.07
SEC61YLR378C YDR514CQ04408 483 aa8.39□□□□□ -1.07
SEC61YLR378C FMP40Q08968 688 aaPredicted RBP8.39□□□□□ -1.07
SEC61YLR378C YDL177CQ12257 170 aa8.39□□□□□ -1.07
SEC61YLR378C FLP1P03870 423 aa8.38□□□□□ -1.07
SEC61YLR378C HAP4P14064 554 aa8.38□□□□□ -1.07
SEC61YLR378C CWH43P25618 953 aa8.38□□□□□ -1.07
SEC61YLR378C SBA1P28707 216 aaKnown RBP8.38□□□□□ -1.07
SEC61YLR378C GPX1P36014 167 aa8.38□□□□□ -1.07
SEC61YLR378C NSG1P38837 291 aa8.38□□□□□ -1.07
SEC61YLR378C SKN7P38889 622 aa8.38□□□□□ -1.07
SEC61YLR378C HRB1P38922 454 aaKnown RBP RIP-Chip data8.38□□□□□ -1.07not detected
SEC61YLR378C PAC1P39946 494 aaKnown RBP8.38□□□□□ -1.07
SEC61YLR378C YCK3P39962 524 aa8.38□□□□□ -1.07
SEC61YLR378C YAE1P47118 141 aaPredicted RBP8.38□□□□□ -1.07
SEC61YLR378C SEH1P53011 349 aaKnown RBP8.38□□□□□ -1.07
SEC61YLR378C YLR173WQ06247 608 aa8.38□□□□□ -1.07
SEC61YLR378C RKM1Q08961 583 aaPredicted RBP8.38□□□□□ -1.07
SEC61YLR378C ACF2Q12168 779 aa8.38□□□□□ -1.07
SEC61YLR378C PAR32Q12515 295 aaKnown RBP8.38□□□□□ -1.07
SEC61YLR378C YOS9Q99220 542 aa8.38□□□□□ -1.07
SEC61YLR378C CAN1P04817 590 aa8.37□□□□□ -1.07
SEC61YLR378C STP22P25604 385 aa8.37□□□□□ -1.07
SEC61YLR378C SLC1P33333 303 aa8.37□□□□□ -1.07
SEC61YLR378C HIS7P33734 552 aaKnown RBP8.37□□□□□ -1.07
SEC61YLR378C ALG3P38179 458 aa8.37□□□□□ -1.07
SEC61YLR378C NAB3P38996 802 aaKnown RBP RIP-Chip data8.37□□□□□ -1.07not detected
SEC61YLR378C YJL193WP39542 402 aa8.37□□□□□ -1.07
SEC61YLR378C IMD3P50095 523 aaKnown RBP8.37□□□□□ -1.07
SEC61YLR378C CPR8P53728 308 aa8.37□□□□□ -1.07
SEC61YLR378C YNR062CP53748 327 aa8.37□□□□□ -1.07
SEC61YLR378C NAM8Q00539 523 aaKnown RBP8.37□□□□□ -1.07
SEC61YLR378C NOG1Q02892 647 aaKnown RBP8.37□□□□□ -1.07
Retrieved 100 of 5,963 RNA–protein pairs in 16.3 ms