RNA–Protein interactions for RNA: YLR115W

CFT2, Transcript of Subunit of the mRNA cleavage and polyadenlylation factor (CPF), yeastyeast

Gene CFT2, Length 2,580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CFT2YLR115W SCD6P45978 349 aaKnown RBP RIP-Chip data1.8□□□□□ -2.12not detected
CFT2YLR115W HXT11P54862 567 aa1.8□□□□□ -2.12
CFT2YLR115W SPP2Q02521 185 aa1.8□□□□□ -2.12
CFT2YLR115W PEX12Q04370 399 aa1.8□□□□□ -2.12
CFT2YLR115W CDD1Q06549 142 aa1.8□□□□□ -2.12
CFT2YLR115W IPK1Q06667 281 aa1.8□□□□□ -2.12
CFT2YLR115W RTT109Q07794 436 aa1.8□□□□□ -2.12
CFT2YLR115W YOL075CQ08234 1294 aa1.8□□□□□ -2.12
CFT2YLR115W DNL4Q08387 944 aaPredicted RBP1.8□□□□□ -2.12
CFT2YLR115W YDL109CQ12103 647 aa1.8□□□□□ -2.12
CFT2YLR115W ERP3Q12403 225 aa1.8□□□□□ -2.12
CFT2YLR115W NCB2Q92317 146 aa1.8□□□□□ -2.12
CFT2YLR115W SWI1P09547 1314 aa1.8□□□□□ -2.12
CFT2YLR115W TEL1P38110 2787 aa1.79□□□□□ -2.12
CFT2YLR115W JIP3O13555 125 aa1.79□□□□□ -2.12
CFT2YLR115W TDH2P00358 332 aaKnown RBP1.79□□□□□ -2.12
CFT2YLR115W TDH3P00359 332 aaKnown RBP RIP-Chip data1.79□□□□□ -2.12not detected
CFT2YLR115W ALG1P16661 449 aa1.79□□□□□ -2.12
CFT2YLR115W SLM5P25345 492 aaKnown RBP1.79□□□□□ -2.12
CFT2YLR115W RPS2P25443 254 aaKnown RBP1.79□□□□□ -2.12
CFT2YLR115W ERG9P29704 444 aa1.79□□□□□ -2.12
CFT2YLR115W DEG1P31115 442 aaKnown RBP1.79□□□□□ -2.12
CFT2YLR115W ATS1P31386 333 aa1.79□□□□□ -2.12
CFT2YLR115W NRP1P32770 719 aaKnown RBP RIP-Chip data1.79□□□□□ -2.12not detected
CFT2YLR115W IMP3P32899 183 aaPredicted RBP1.79□□□□□ -2.12
CFT2YLR115W SPP381P38282 291 aaPredicted RBP1.79□□□□□ -2.12
CFT2YLR115W FZO1P38297 855 aa1.79□□□□□ -2.12
CFT2YLR115W CIN4P39110 191 aa1.79□□□□□ -2.12
CFT2YLR115W POP1P41812 875 aa1.79□□□□□ -2.12
CFT2YLR115W DIM1P41819 318 aaKnown RBP1.79□□□□□ -2.12
CFT2YLR115W GLG2P47011 380 aa1.79□□□□□ -2.12
CFT2YLR115W HAM1P47119 197 aaKnown RBP1.79□□□□□ -2.12
CFT2YLR115W NUP116Q02630 1113 aa1.79□□□□□ -2.12
CFT2YLR115W ENT5Q03769 411 aaKnown RBP1.79□□□□□ -2.12
CFT2YLR115W IVY1Q04934 453 aa1.79□□□□□ -2.12
CFT2YLR115W GMC2Q06201 188 aa1.79□□□□□ -2.12
CFT2YLR115W SEC10Q06245 871 aa1.79□□□□□ -2.12
CFT2YLR115W RPS10AQ08745 105 aaPredicted RBP1.79□□□□□ -2.12
CFT2YLR115W RDR1Q08904 546 aa1.79□□□□□ -2.12
CFT2YLR115W SRO7Q12038 1033 aa1.79□□□□□ -2.12
CFT2YLR115W UTP20P35194 2493 aaKnown RBP1.79□□□□□ -2.12
CFT2YLR115W NUP192P47054 1683 aa1.79□□□□□ -2.12
CFT2YLR115W HIS4P00815 799 aaKnown RBP1.79□□□□□ -2.12
CFT2YLR115W MATALPHA1P0CY06 175 aa1.79□□□□□ -2.12
CFT2YLR115W HMLALPHA1P0CY07 175 aa1.79□□□□□ -2.12
CFT2YLR115W DAL82P21705 255 aa1.79□□□□□ -2.12
CFT2YLR115W GPI12P23797 304 aa1.79□□□□□ -2.12
CFT2YLR115W DAL2P25335 343 aa1.79□□□□□ -2.12
CFT2YLR115W PUT3P25502 979 aaPredicted RBP1.79□□□□□ -2.12
CFT2YLR115W CWP1P28319 239 aa1.79□□□□□ -2.12
CFT2YLR115W PSO2P30620 661 aa1.79□□□□□ -2.12
CFT2YLR115W PRP18P33411 251 aaPredicted RBP1.79□□□□□ -2.12
CFT2YLR115W SRP102P36057 244 aaPredicted RBP1.79□□□□□ -2.12
CFT2YLR115W PHD1P36093 366 aa1.79□□□□□ -2.12
CFT2YLR115W YBR139WP38109 508 aa1.79□□□□□ -2.12
CFT2YLR115W ANS1P38832 159 aa1.79□□□□□ -2.12
CFT2YLR115W UIP3P39547 235 aa1.79□□□□□ -2.12
CFT2YLR115W PAC11P40960 533 aa1.79□□□□□ -2.12
CFT2YLR115W RTT101P47050 842 aa1.79□□□□□ -2.12
CFT2YLR115W PYK2P52489 506 aaKnown RBP1.79□□□□□ -2.12
CFT2YLR115W YGR168CP53293 376 aa1.79□□□□□ -2.12
CFT2YLR115W SOL4P53315 255 aa1.79□□□□□ -2.12
CFT2YLR115W NOP13P53883 403 aaKnown RBP RIP-Chip data1.79□□□□□ -2.12not detected
CFT2YLR115W MRS2Q01926 470 aa1.79□□□□□ -2.12
CFT2YLR115W GIP3Q03016 1276 aa1.79□□□□□ -2.12
CFT2YLR115W EBS1Q03466 884 aaKnown RBP1.79□□□□□ -2.12
CFT2YLR115W YDR209CQ03480 137 aa1.79□□□□□ -2.12
CFT2YLR115W YMR209CQ03648 457 aa1.79□□□□□ -2.12
CFT2YLR115W NDL1Q06568 189 aa1.79□□□□□ -2.12
CFT2YLR115W NSE1Q07913 336 aa1.79□□□□□ -2.12
CFT2YLR115W AAD15Q08361 143 aa1.79□□□□□ -2.12
CFT2YLR115W DDC1Q08949 612 aa1.79□□□□□ -2.12
CFT2YLR115W SAM4Q08985 325 aaKnown RBP1.79□□□□□ -2.12
CFT2YLR115W INP53Q12271 1107 aa1.79□□□□□ -2.12
CFT2YLR115W MAS2P11914 482 aa1.78□□□□□ -2.12
CFT2YLR115W REV1P12689 985 aa1.78□□□□□ -2.12
CFT2YLR115W HPR1P17629 752 aaKnown RBP1.78□□□□□ -2.12
CFT2YLR115W KRE2P27809 442 aa1.78□□□□□ -2.12
CFT2YLR115W DOA1P36037 715 aa1.78□□□□□ -2.12
CFT2YLR115W CBT1P36038 271 aaPredicted RBP1.78□□□□□ -2.12
CFT2YLR115W LDB7P38210 180 aa1.78□□□□□ -2.12
CFT2YLR115W DBP8P38719 431 aa1.78□□□□□ -2.12
CFT2YLR115W FET3P38993 636 aa1.78□□□□□ -2.12
CFT2YLR115W SOP4P39543 234 aaPredicted RBP1.78□□□□□ -2.12
CFT2YLR115W THO1P40040 218 aaKnown RBP1.78□□□□□ -2.12
CFT2YLR115W UTP25P40498 721 aaKnown RBP1.78□□□□□ -2.12
CFT2YLR115W DSN1P40568 576 aa1.78□□□□□ -2.12
CFT2YLR115W CIN5P40917 295 aa1.78□□□□□ -2.12
CFT2YLR115W LSM1P47017 172 aaKnown RBP1.78□□□□□ -2.12
CFT2YLR115W TMA22P47089 198 aaPredicted RBP1.78□□□□□ -2.12
CFT2YLR115W GET1P53192 235 aa1.78□□□□□ -2.12
CFT2YLR115W PXR1P53335 271 aaPredicted RBP1.78□□□□□ -2.12
CFT2YLR115W YLR283WQ05867 314 aa1.78□□□□□ -2.12
CFT2YLR115W STE23Q06010 1027 aa1.78□□□□□ -2.12
CFT2YLR115W RAX1Q08760 435 aa1.78□□□□□ -2.12
CFT2YLR115W YPQ1Q12010 308 aa1.78□□□□□ -2.12
CFT2YLR115W YOR029WQ12243 111 aa1.78□□□□□ -2.12
CFT2YLR115W UBA3Q99344 299 aa1.78□□□□□ -2.12
CFT2YLR115W RPP0P05317 312 aaKnown RBP1.78□□□□□ -2.12
CFT2YLR115W RHO1P06780 209 aaKnown RBP1.78□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 17.4 ms