RNA–Protein interactions for RNA: YLR022C

SDO1, Transcript of Guanine nucleotide exchange factor (GEF) for Ria1p, yeastyeast

Gene SDO1, Length 753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDO1YLR022C GDT1P38301 280 aaPredicted RBP2.84□□□□□ -1.95
SDO1YLR022C TSC10P38342 320 aa2.84□□□□□ -1.95
SDO1YLR022C ANS1P38832 159 aa2.84□□□□□ -1.95
SDO1YLR022C MEP1P40260 492 aa2.84□□□□□ -1.95
SDO1YLR022C UTP18P40362 594 aaPredicted RBP2.84□□□□□ -1.95
SDO1YLR022C MET28P40573 187 aa2.84□□□□□ -1.95
SDO1YLR022C YDL186WP48568 277 aa2.84□□□□□ -1.95
SDO1YLR022C OAZ1Q02803 292 aa2.84□□□□□ -1.95
SDO1YLR022C TAF12Q03761 539 aa2.84□□□□□ -1.95
SDO1YLR022C ERB1Q04660 807 aaKnown RBP2.84□□□□□ -1.95
SDO1YLR022C YLR345WQ06137 509 aa2.84□□□□□ -1.95
SDO1YLR022C REX3Q12090 404 aa2.84□□□□□ -1.95
SDO1YLR022C ARG81P05085 880 aa2.83□□□□□ -1.96
SDO1YLR022C PRB1P09232 635 aa2.83□□□□□ -1.96
SDO1YLR022C YFR010W-AP0C5N0 62 aa2.83□□□□□ -1.96
SDO1YLR022C CPR2P23285 205 aa2.83□□□□□ -1.96
SDO1YLR022C SPB1P25582 841 aaPredicted RBP2.83□□□□□ -1.96
SDO1YLR022C YCR051WP25631 222 aa2.83□□□□□ -1.96
SDO1YLR022C RPB9P27999 122 aa2.83□□□□□ -1.96
SDO1YLR022C MEI4P29467 408 aa2.83□□□□□ -1.96
SDO1YLR022C RPC25P35718 212 aa2.83□□□□□ -1.96
SDO1YLR022C MAK5P38112 773 aaPredicted RBP2.83□□□□□ -1.96
SDO1YLR022C PCH2P38126 564 aa2.83□□□□□ -1.96
SDO1YLR022C PRS3P38689 320 aaKnown RBP2.83□□□□□ -1.96
SDO1YLR022C GRE3P38715 327 aaKnown RBP RIP-Chip data2.83□□□□□ -1.96not detected
SDO1YLR022C RRF1P38771 230 aa2.83□□□□□ -1.96
SDO1YLR022C YHR127WP38833 243 aaKnown RBP2.83□□□□□ -1.96
SDO1YLR022C YER188WP40103 239 aa2.83□□□□□ -1.96
SDO1YLR022C PRE6P40303 254 aaKnown RBP2.83□□□□□ -1.96
SDO1YLR022C ICE2P40499 491 aa2.83□□□□□ -1.96
SDO1YLR022C MNN5P46982 586 aa2.83□□□□□ -1.96
SDO1YLR022C BIO3P50277 480 aa2.83□□□□□ -1.96
SDO1YLR022C RLI1Q03195 608 aaKnown RBP2.83□□□□□ -1.96
SDO1YLR022C VTI1Q04338 217 aa2.83□□□□□ -1.96
SDO1YLR022C BUD22Q04347 519 aaKnown RBP2.83□□□□□ -1.96
SDO1YLR022C YDR222WQ04925 415 aa2.83□□□□□ -1.96
SDO1YLR022C SSK1Q07084 712 aa2.83□□□□□ -1.96
SDO1YLR022C PML1Q07930 204 aaPredicted RBP2.83□□□□□ -1.96
SDO1YLR022C ETT1Q08421 412 aaKnown RBP2.83□□□□□ -1.96
SDO1YLR022C MMT2Q08970 484 aa2.83□□□□□ -1.96
SDO1YLR022C ATG29Q12092 213 aa2.83□□□□□ -1.96
SDO1YLR022C YPR022CQ12139 1133 aa2.83□□□□□ -1.96
SDO1YLR022C AVL9Q12500 764 aa2.83□□□□□ -1.96
SDO1YLR022C YPT6Q99260 215 aa2.83□□□□□ -1.96
SDO1YLR022C Q0144Q9ZZW2 109 aa2.83□□□□□ -1.96
SDO1YLR022C RPS8AP0CX39 200 aaKnown RBP2.82□□□□□ -1.96
SDO1YLR022C RPS8BP0CX40 200 aaKnown RBP2.82□□□□□ -1.96
SDO1YLR022C RPI1P23250 407 aaKnown RBP2.82□□□□□ -1.96
SDO1YLR022C VMA16P23968 213 aa2.82□□□□□ -1.96
SDO1YLR022C RPS2P25443 254 aaKnown RBP2.82□□□□□ -1.96
SDO1YLR022C POL4P25615 582 aa2.82□□□□□ -1.96
SDO1YLR022C TAH1P25638 111 aaPredicted RBP2.82□□□□□ -1.96
SDO1YLR022C ADE1P27616 306 aa2.82□□□□□ -1.96
SDO1YLR022C SMI1P32566 505 aa2.82□□□□□ -1.96
SDO1YLR022C PRS1P32895 427 aaKnown RBP2.82□□□□□ -1.96
SDO1YLR022C YKL187CP34231 750 aa2.82□□□□□ -1.96
SDO1YLR022C ECM15P35195 104 aa2.82□□□□□ -1.96
SDO1YLR022C YPT52P36018 234 aaKnown RBP2.82□□□□□ -1.96
SDO1YLR022C CMC1P36064 111 aa2.82□□□□□ -1.96
SDO1YLR022C LAS1P36146 502 aaPredicted RBP2.82□□□□□ -1.96
SDO1YLR022C DAD2P36162 133 aa2.82□□□□□ -1.96
SDO1YLR022C SRO77P38163 1010 aa2.82□□□□□ -1.96
SDO1YLR022C AVT5P38176 459 aa2.82□□□□□ -1.96
SDO1YLR022C RFT1P38206 574 aaPredicted RBP2.82□□□□□ -1.96
SDO1YLR022C LAG1P38703 411 aa2.82□□□□□ -1.96
SDO1YLR022C PRP39P39682 629 aaKnown RBP2.82□□□□□ -1.96
SDO1YLR022C YIL012WP40551 113 aa2.82□□□□□ -1.96
SDO1YLR022C SEC27P41811 889 aaKnown RBP2.82□□□□□ -1.96
SDO1YLR022C GDS1P41913 522 aa2.82□□□□□ -1.96
SDO1YLR022C AIP1P46680 615 aaKnown RBP2.82□□□□□ -1.96
SDO1YLR022C TWF1P53250 332 aa2.82□□□□□ -1.96
SDO1YLR022C YGR111WP53265 400 aa2.82□□□□□ -1.96
SDO1YLR022C SKI8Q02793 397 aaPredicted RBP2.82□□□□□ -1.96
SDO1YLR022C NGL3Q03210 505 aa2.82□□□□□ -1.96
SDO1YLR022C CGI121Q03705 181 aaKnown RBP2.82□□□□□ -1.96
SDO1YLR022C YDR239CQ03780 787 aa2.82□□□□□ -1.96
SDO1YLR022C RPN9Q04062 393 aaKnown RBP2.82□□□□□ -1.96
SDO1YLR022C YMR111CQ04461 462 aaPredicted RBP2.82□□□□□ -1.96
SDO1YLR022C ROY1Q04847 553 aa2.82□□□□□ -1.96
SDO1YLR022C ERP1Q05359 219 aaKnown RBP2.82□□□□□ -1.96
SDO1YLR022C RQC1Q05468 723 aaKnown RBP2.82□□□□□ -1.96
SDO1YLR022C VPS38Q05919 439 aa2.82□□□□□ -1.96
SDO1YLR022C LUC7Q07508 261 aaPredicted RBP2.82□□□□□ -1.96
SDO1YLR022C DET1Q99288 334 aaKnown RBP2.82□□□□□ -1.96
SDO1YLR022C RPL6BP05739 176 aaKnown RBP2.81□□□□□ -1.96
SDO1YLR022C RPL22AP05749 121 aaKnown RBP2.81□□□□□ -1.96
SDO1YLR022C MET2P08465 486 aa2.81□□□□□ -1.96
SDO1YLR022C CBS2P14905 389 aa2.81□□□□□ -1.96
SDO1YLR022C TPS2P31688 896 aaKnown RBP2.81□□□□□ -1.96
SDO1YLR022C YME1P32795 747 aa2.81□□□□□ -1.96
SDO1YLR022C RAD5P32849 1169 aaPredicted RBP2.81□□□□□ -1.96
SDO1YLR022C VPS17P32913 551 aa2.81□□□□□ -1.96
SDO1YLR022C TIP20P33891 701 aa2.81□□□□□ -1.96
SDO1YLR022C RRN10P38204 145 aa2.81□□□□□ -1.96
SDO1YLR022C ARN2P38724 620 aa2.81□□□□□ -1.96
SDO1YLR022C BUR6P40096 142 aa2.81□□□□□ -1.96
SDO1YLR022C EMC2P47133 292 aaKnown RBP2.81□□□□□ -1.96
SDO1YLR022C DIA3P52290 468 aa2.81□□□□□ -1.96
SDO1YLR022C COS10P52924 374 aa2.81□□□□□ -1.96
SDO1YLR022C BOR1P53838 576 aa2.81□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 15.4 ms