RNA–Protein interactions for RNA: YKL039W

PTM1, Transcript of Protein of unknown function, yeastyeast

Gene PTM1, Length 1,572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTM1YKL039W SKN1P33336 771 aa3.53□□□□□ -1.84
PTM1YKL039W RTC2P38279 296 aa3.53□□□□□ -1.84
PTM1YKL039W YSW1P38280 609 aa3.53□□□□□ -1.84
PTM1YKL039W YHK8P38776 514 aa3.53□□□□□ -1.84
PTM1YKL039W PTI1P39927 425 aaPredicted RBP3.53□□□□□ -1.84
PTM1YKL039W MST27P53176 234 aa3.53□□□□□ -1.84
PTM1YKL039W TDA1Q03533 586 aa3.53□□□□□ -1.84
PTM1YKL039W MYO5Q04439 1219 aaKnown RBP3.53□□□□□ -1.84
PTM1YKL039W GPM3Q12326 303 aa3.53□□□□□ -1.84
PTM1YKL039W CDC37P06101 506 aaKnown RBP3.52□□□□□ -1.85
PTM1YKL039W CDC10P25342 322 aaKnown RBP3.52□□□□□ -1.85
PTM1YKL039W VMA8P32610 256 aaKnown RBP3.52□□□□□ -1.85
PTM1YKL039W SKI2P35207 1287 aaKnown RBP RIP-Chip data3.52□□□□□ -1.85not detected
PTM1YKL039W SEC9P40357 651 aa3.52□□□□□ -1.85
PTM1YKL039W YJR079WP47126 109 aa3.52□□□□□ -1.85
PTM1YKL039W BIR1P47134 954 aa3.52□□□□□ -1.85
PTM1YKL039W TOS2P50078 622 aa3.52□□□□□ -1.85
PTM1YKL039W BNS1P50084 137 aa3.52□□□□□ -1.85
PTM1YKL039W PIB2P53191 635 aa3.52□□□□□ -1.85
PTM1YKL039W SPO19Q03029 223 aa3.52□□□□□ -1.85
PTM1YKL039W NOP6Q07623 225 aaKnown RBP3.52□□□□□ -1.85
PTM1YKL039W EAF3Q12432 401 aa3.52□□□□□ -1.85
PTM1YKL039W FMP27Q06179 2628 aa3.52□□□□□ -1.85
PTM1YKL039W ATP1P07251 545 aaKnown RBP3.51□□□□□ -1.85
PTM1YKL039W ALG1P16661 449 aa3.51□□□□□ -1.85
PTM1YKL039W CKI1P20485 582 aa3.51□□□□□ -1.85
PTM1YKL039W MAK31P23059 88 aa3.51□□□□□ -1.85
PTM1YKL039W RAD51P25454 400 aa3.51□□□□□ -1.85
PTM1YKL039W YEF1P32622 495 aa3.51□□□□□ -1.85
PTM1YKL039W YHL026CP38740 315 aa3.51□□□□□ -1.85
PTM1YKL039W CTM1P38818 585 aa3.51□□□□□ -1.85
PTM1YKL039W BAT1P38891 393 aaKnown RBP3.51□□□□□ -1.85
PTM1YKL039W EGT2P42835 1041 aa3.51□□□□□ -1.85
PTM1YKL039W MIC19P43594 170 aa3.51□□□□□ -1.85
PTM1YKL039W PXR1P53335 271 aaPredicted RBP3.51□□□□□ -1.85
PTM1YKL039W YNL134CP53912 376 aaKnown RBP3.51□□□□□ -1.85
PTM1YKL039W CMS1Q07897 291 aaKnown RBP3.51□□□□□ -1.85
PTM1YKL039W DCI1Q08558 271 aa3.51□□□□□ -1.85
PTM1YKL039W NBL1Q3E7Y6 73 aa3.51□□□□□ -1.85
PTM1YKL039W SSC1P0CS90 654 aaKnown RBP3.51□□□□□ -1.85
PTM1YKL039W AAT2P23542 418 aaKnown RBP3.51□□□□□ -1.85
PTM1YKL039W BMH1P29311 267 aaKnown RBP3.51□□□□□ -1.85
PTM1YKL039W YFR057WP43625 151 aa3.51□□□□□ -1.85
PTM1YKL039W AIM24P47127 394 aa3.51□□□□□ -1.85
PTM1YKL039W YML6P51998 286 aa3.51□□□□□ -1.85
PTM1YKL039W CUE3P53137 624 aaKnown RBP3.51□□□□□ -1.85
PTM1YKL039W CIK1Q01649 594 aa3.51□□□□□ -1.85
PTM1YKL039W SFH1Q06168 426 aa3.51□□□□□ -1.85
PTM1YKL039W NSE1Q07913 336 aa3.51□□□□□ -1.85
PTM1YKL039W SMC5Q08204 1093 aa3.51□□□□□ -1.85
PTM1YKL039W RNH203Q12338 110 aa3.51□□□□□ -1.85
PTM1YKL039W HIF1Q12373 385 aa3.51□□□□□ -1.85
PTM1YKL039W PAB1P04147 577 aaKnown RBP RIP-Chip data3.5□□□□□ -1.85not detected
PTM1YKL039W UBC6P33296 250 aaPredicted RBP3.5□□□□□ -1.85
PTM1YKL039W SPT10P35208 640 aa3.5□□□□□ -1.85
PTM1YKL039W MRP21P38175 177 aa3.5□□□□□ -1.85
PTM1YKL039W SPP381P38282 291 aaPredicted RBP3.5□□□□□ -1.85
PTM1YKL039W SMC2P38989 1170 aaKnown RBP3.5□□□□□ -1.85
PTM1YKL039W OXA1P39952 402 aa3.5□□□□□ -1.85
PTM1YKL039W EPL1P43572 832 aa3.5□□□□□ -1.85
PTM1YKL039W ATG18P43601 500 aa3.5□□□□□ -1.85
PTM1YKL039W STE24P47154 453 aa3.5□□□□□ -1.85
PTM1YKL039W PMT5P52867 743 aa3.5□□□□□ -1.85
PTM1YKL039W MFG1Q07684 458 aa3.5□□□□□ -1.85
PTM1YKL039W YCR024C-BQ3E7Z8 88 aa3.5□□□□□ -1.85
PTM1YKL039W GCD2P12754 651 aaPredicted RBP3.49□□□□□ -1.85
PTM1YKL039W PRR1P28708 518 aa3.49□□□□□ -1.85
PTM1YKL039W NRP1P32770 719 aaKnown RBP RIP-Chip data3.49□□□□□ -1.85not detected
PTM1YKL039W BMH2P34730 273 aaKnown RBP3.49□□□□□ -1.85
PTM1YKL039W ANR2P36090 516 aaPredicted RBP3.49□□□□□ -1.85
PTM1YKL039W QDR3P38227 689 aa3.49□□□□□ -1.85
PTM1YKL039W SHQ1P40486 507 aaPredicted RBP3.49□□□□□ -1.85
PTM1YKL039W MAM33P40513 266 aa3.49□□□□□ -1.85
PTM1YKL039W EFM4P40516 257 aa3.49□□□□□ -1.85
PTM1YKL039W DFG10P40526 253 aa3.49□□□□□ -1.85
PTM1YKL039W CRH1P53301 507 aa3.49□□□□□ -1.85
PTM1YKL039W RTC4P53850 401 aa3.49□□□□□ -1.85
PTM1YKL039W SPC24Q04477 213 aa3.49□□□□□ -1.85
PTM1YKL039W LOT6Q07923 191 aa3.49□□□□□ -1.85
PTM1YKL039W IRA1P18963 3092 aa3.49□□□□□ -1.85
PTM1YKL039W CCH1P50077 2039 aa3.49□□□□□ -1.85
PTM1YKL039W MSB2P32334 1306 aa3.48□□□□□ -1.85
PTM1YKL039W PHO91P27514 894 aa3.48□□□□□ -1.85
PTM1YKL039W COX13P32799 129 aa3.48□□□□□ -1.85
PTM1YKL039W YET1P35723 206 aa3.48□□□□□ -1.85
PTM1YKL039W SIP3P38717 1229 aa3.48□□□□□ -1.85
PTM1YKL039W YIL001WP40560 513 aa3.48□□□□□ -1.85
PTM1YKL039W HAC1P41546 238 aa3.48□□□□□ -1.85
PTM1YKL039W ROG1P53118 685 aa3.48□□□□□ -1.85
PTM1YKL039W EBS1Q03466 884 aaKnown RBP3.48□□□□□ -1.85
PTM1YKL039W VTI1Q04338 217 aa3.48□□□□□ -1.85
PTM1YKL039W TAF10Q12030 206 aa3.48□□□□□ -1.85
PTM1YKL039W SPE3Q12074 293 aaKnown RBP3.48□□□□□ -1.85
PTM1YKL039W RIO1Q12196 484 aaKnown RBP3.48□□□□□ -1.85
PTM1YKL039W MEX67Q99257 599 aaKnown RBP3.48□□□□□ -1.85
PTM1YKL039W SEN1Q00416 2231 aaKnown RBP3.47□□□□□ -1.85
PTM1YKL039W OPI3P05375 206 aa3.47□□□□□ -1.85
PTM1YKL039W PIS1P06197 220 aaKnown RBP3.47□□□□□ -1.85
PTM1YKL039W SKT5P34226 696 aa3.47□□□□□ -1.85
PTM1YKL039W COY1P34237 679 aa3.47□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 17.7 ms