RNA–Protein interactions for RNA: YIL061C

SNP1, Transcript of Component of U1 snRNP required for mRNA splicing via spliceosome, yeastyeast

Gene SNP1, Length 903 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNP1YIL061C BRX1Q08235 291 aaKnown RBP7.05□□□□□ -1.28
SNP1YIL061C MMP1Q12372 583 aa7.05□□□□□ -1.28
SNP1YIL061C YDL007C-AQ2V2Q0 85 aa7.05□□□□□ -1.28
SNP1YIL061C YBL113CQ7M4S9 792 aa7.05□□□□□ -1.28
SNP1YIL061C YEL009C-AA0A023PZF2 135 aa7.04□□□□□ -1.28
SNP1YIL061C GAL4P04386 881 aa7.04□□□□□ -1.28
SNP1YIL061C SEC12P11655 471 aa7.04□□□□□ -1.28
SNP1YIL061C HOP1P20050 605 aa7.04□□□□□ -1.28
SNP1YIL061C PHO80P20052 293 aa7.04□□□□□ -1.28
SNP1YIL061C PRE7P23724 241 aaKnown RBP7.04□□□□□ -1.28
SNP1YIL061C PBN1P25580 416 aa7.04□□□□□ -1.28
SNP1YIL061C BET3P36149 193 aa7.04□□□□□ -1.28
SNP1YIL061C RPS20P38701 121 aaKnown RBP7.04□□□□□ -1.28
SNP1YIL061C PAC1P39946 494 aaKnown RBP7.04□□□□□ -1.28
SNP1YIL061C MSE1P48525 536 aa7.04□□□□□ -1.28
SNP1YIL061C SPT20P50875 604 aa7.04□□□□□ -1.28
SNP1YIL061C PGA1P53896 198 aa7.04□□□□□ -1.28
SNP1YIL061C NOG1Q02892 647 aaKnown RBP7.04□□□□□ -1.28
SNP1YIL061C PFA5Q03289 374 aa7.04□□□□□ -1.28
SNP1YIL061C SPC19Q03954 165 aa7.04□□□□□ -1.28
SNP1YIL061C PLM2Q04383 521 aa7.04□□□□□ -1.28
SNP1YIL061C YML053CQ04978 212 aa7.04□□□□□ -1.28
SNP1YIL061C SNT309Q06091 175 aaPredicted RBP7.04□□□□□ -1.28
SNP1YIL061C SYO1Q07395 620 aa7.04□□□□□ -1.28
SNP1YIL061C PEX27Q08580 376 aa7.04□□□□□ -1.28
SNP1YIL061C YOL114CQ12322 202 aa7.04□□□□□ -1.28
SNP1YIL061C RTN2Q12443 393 aa7.04□□□□□ -1.28
SNP1YIL061C LSO1Q3E827 93 aa7.04□□□□□ -1.28
SNP1YIL061C YMR084WA2P2R3 262 aa7.03□□□□□ -1.28
SNP1YIL061C AI1P03875 834 aa7.03□□□□□ -1.28
SNP1YIL061C SIR2P06700 562 aa7.03□□□□□ -1.28
SNP1YIL061C BAR1P12630 587 aa7.03□□□□□ -1.28
SNP1YIL061C CAP2P13517 287 aa7.03□□□□□ -1.28
SNP1YIL061C GCN3P14741 305 aa7.03□□□□□ -1.28
SNP1YIL061C VPS51P36116 164 aa7.03□□□□□ -1.28
SNP1YIL061C YBR063CP38083 404 aa7.03□□□□□ -1.28
SNP1YIL061C MCM7P38132 845 aa7.03□□□□□ -1.28
SNP1YIL061C MIT1P40002 666 aa7.03□□□□□ -1.28
SNP1YIL061C FMP52P40008 231 aa7.03□□□□□ -1.28
SNP1YIL061C CIN1P40987 1014 aa7.03□□□□□ -1.28
SNP1YIL061C ALB1P47019 175 aaPredicted RBP7.03□□□□□ -1.28
SNP1YIL061C IMO32P53219 342 aa7.03□□□□□ -1.28
SNP1YIL061C INP1Q03694 420 aa7.03□□□□□ -1.28
SNP1YIL061C YDL176WQ12027 708 aa7.03□□□□□ -1.28
SNP1YIL061C SUS1Q6WNK7 96 aa7.03□□□□□ -1.28
SNP1YIL061C NAR1P23503 491 aaKnown RBP7.02□□□□□ -1.29
SNP1YIL061C IMG1P25626 169 aa7.02□□□□□ -1.29
SNP1YIL061C ACH1P32316 526 aa7.02□□□□□ -1.29
SNP1YIL061C PET112P33893 541 aa7.02□□□□□ -1.29
SNP1YIL061C YBR238CP38330 731 aaKnown RBP7.02□□□□□ -1.29
SNP1YIL061C RRP4P38792 359 aaKnown RBP7.02□□□□□ -1.29
SNP1YIL061C HRB1P38922 454 aaKnown RBP RIP-Chip data7.02□□□□□ -1.29not detected
SNP1YIL061C YIL166CP40445 542 aa7.02□□□□□ -1.29
SNP1YIL061C YIL152WP40455 235 aa7.02□□□□□ -1.29
SNP1YIL061C FMC1P40491 155 aa7.02□□□□□ -1.29
SNP1YIL061C ICE2P40499 491 aa7.02□□□□□ -1.29
SNP1YIL061C FET5P43561 622 aa7.02□□□□□ -1.29
SNP1YIL061C IRC6P43615 237 aa7.02□□□□□ -1.29
SNP1YIL061C MDE1P47095 244 aa7.02□□□□□ -1.29
SNP1YIL061C BPL1P48445 690 aaPredicted RBP7.02□□□□□ -1.29
SNP1YIL061C BUD9P53226 547 aa7.02□□□□□ -1.29
SNP1YIL061C YAT1P80235 687 aa7.02□□□□□ -1.29
SNP1YIL061C YPR127WQ06494 345 aa7.02□□□□□ -1.29
SNP1YIL061C YPR174CQ06616 221 aaPredicted RBP7.02□□□□□ -1.29
SNP1YIL061C IPK1Q06667 281 aa7.02□□□□□ -1.29
SNP1YIL061C NBA1Q08229 501 aaKnown RBP7.02□□□□□ -1.29
SNP1YIL061C RKM1Q08961 583 aaPredicted RBP7.02□□□□□ -1.29
SNP1YIL061C YDL177CQ12257 170 aa7.02□□□□□ -1.29
SNP1YIL061C TY1A-NL1Q12391 440 aaKnown RBP7.02□□□□□ -1.29
SNP1YIL061C SFG1Q12507 346 aa7.02□□□□□ -1.29
SNP1YIL061C DFG16Q99234 619 aa7.02□□□□□ -1.29
SNP1YIL061C FMP27Q06179 2628 aa7.01□□□□□ -1.29
SNP1YIL061C AI4P03878 556 aa7.01□□□□□ -1.29
SNP1YIL061C YGL041W-AP0C5N3 154 aa7.01□□□□□ -1.29
SNP1YIL061C HMG1P12683 1054 aa7.01□□□□□ -1.29
SNP1YIL061C HAP4P14064 554 aa7.01□□□□□ -1.29
SNP1YIL061C FPS1P23900 669 aa7.01□□□□□ -1.29
SNP1YIL061C MXR2P25566 168 aa7.01□□□□□ -1.29
SNP1YIL061C AHC2P25649 128 aa7.01□□□□□ -1.29
SNP1YIL061C SNC1P31109 117 aa7.01□□□□□ -1.29
SNP1YIL061C PUB1P32588 453 aaKnown RBP RIP-Chip data7.01□□□□□ -1.29not detected
SNP1YIL061C YEF1P32622 495 aa7.01□□□□□ -1.29
SNP1YIL061C TIM12P32830 109 aa7.01□□□□□ -1.29
SNP1YIL061C ECT1P33412 323 aa7.01□□□□□ -1.29
SNP1YIL061C RPS27AP35997 82 aaKnown RBP7.01□□□□□ -1.29
SNP1YIL061C EXO84P38261 753 aa7.01□□□□□ -1.29
SNP1YIL061C RPS27BP38711 82 aa7.01□□□□□ -1.29
SNP1YIL061C UTP25P40498 721 aaKnown RBP7.01□□□□□ -1.29
SNP1YIL061C YIL086CP40503 102 aa7.01□□□□□ -1.29
SNP1YIL061C YPS6P40583 537 aa7.01□□□□□ -1.29
SNP1YIL061C MDV1P47025 714 aa7.01□□□□□ -1.29
SNP1YIL061C IRC18P47056 224 aa7.01□□□□□ -1.29
SNP1YIL061C PAU12P53343 120 aa7.01□□□□□ -1.29
SNP1YIL061C RRN9P53437 365 aa7.01□□□□□ -1.29
SNP1YIL061C TDA1Q03533 586 aa7.01□□□□□ -1.29
SNP1YIL061C MSS11Q03825 758 aa7.01□□□□□ -1.29
SNP1YIL061C MFB1Q04922 465 aa7.01□□□□□ -1.29
SNP1YIL061C BNA5Q05979 453 aa7.01□□□□□ -1.29
SNP1YIL061C RGC1Q06108 1083 aaKnown RBP7.01□□□□□ -1.29
SNP1YIL061C GPN3Q06543 272 aa7.01□□□□□ -1.29
Retrieved 100 of 5,963 RNA–protein pairs in 26.5 ms