RNA–Protein interactions for RNA: YHR171W

ATG7, Transcript of Autophagy-related protein and dual specificity member of the E1 family, yeastyeast

Gene ATG7, Length 1,893 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG7YHR171W CPR8P53728 308 aa5.3□□□□□ -1.56
ATG7YHR171W SMX3P54999 86 aaPredicted RBP5.3□□□□□ -1.56
ATG7YHR171W HER2Q03557 464 aa5.3□□□□□ -1.56
ATG7YHR171W ARP10Q04549 284 aa5.3□□□□□ -1.56
ATG7YHR171W NDE2Q07500 545 aa5.3□□□□□ -1.56
ATG7YHR171W SKI7Q08491 747 aaPredicted RBP5.3□□□□□ -1.56
ATG7YHR171W SPO12P17123 173 aa5.3□□□□□ -1.56
ATG7YHR171W BUB3P26449 341 aa5.3□□□□□ -1.56
ATG7YHR171W DEP1P31385 405 aa5.3□□□□□ -1.56
ATG7YHR171W AME1P38313 324 aa5.3□□□□□ -1.56
ATG7YHR171W PRS2P38620 318 aaKnown RBP5.3□□□□□ -1.56
ATG7YHR171W JHD2P47156 728 aaPredicted RBP5.3□□□□□ -1.56
ATG7YHR171W RNT1Q02555 471 aa5.3□□□□□ -1.56
ATG7YHR171W SEC13Q04491 297 aaKnown RBP5.3□□□□□ -1.56
ATG7YHR171W SPC2Q04969 178 aa5.3□□□□□ -1.56
ATG7YHR171W CSM4Q08955 156 aa5.3□□□□□ -1.56
ATG7YHR171W SRL2Q12020 392 aa5.3□□□□□ -1.56
ATG7YHR171W RPL7AP05737 244 aaKnown RBP5.29□□□□□ -1.56
ATG7YHR171W NAM2P11325 894 aa5.29□□□□□ -1.56
ATG7YHR171W MBR1P23493 339 aa5.29□□□□□ -1.56
ATG7YHR171W ERG4P25340 473 aa5.29□□□□□ -1.56
ATG7YHR171W SSO1P32867 290 aa5.29□□□□□ -1.56
ATG7YHR171W ECM15P35195 104 aa5.29□□□□□ -1.56
ATG7YHR171W NDC80P40460 691 aa5.29□□□□□ -1.56
ATG7YHR171W POG1P40473 351 aa5.29□□□□□ -1.56
ATG7YHR171W NIF3P53081 288 aa5.29□□□□□ -1.56
ATG7YHR171W CSM3Q04659 317 aa5.29□□□□□ -1.56
ATG7YHR171W RPL7BQ12213 244 aaKnown RBP5.29□□□□□ -1.56
ATG7YHR171W HEM15P16622 393 aa5.28□□□□□ -1.56
ATG7YHR171W DCC1P25559 380 aa5.28□□□□□ -1.56
ATG7YHR171W IDH1P28834 360 aaKnown RBP RIP-Chip data5.28□□□□□ -1.56not detected
ATG7YHR171W MKK1P32490 508 aa5.28□□□□□ -1.56
ATG7YHR171W EXO1P39875 702 aa5.28□□□□□ -1.56
ATG7YHR171W ARG2P40360 574 aa5.28□□□□□ -1.56
ATG7YHR171W YKE4P40544 346 aa5.28□□□□□ -1.56
ATG7YHR171W GAB1P41733 394 aa5.28□□□□□ -1.56
ATG7YHR171W YFR057WP43625 151 aa5.28□□□□□ -1.56
ATG7YHR171W IMD3P50095 523 aaKnown RBP5.28□□□□□ -1.56
ATG7YHR171W SOL4P53315 255 aa5.28□□□□□ -1.56
ATG7YHR171W TMA10Q06177 86 aa5.28□□□□□ -1.56
ATG7YHR171W DET1Q99288 334 aaKnown RBP5.28□□□□□ -1.56
ATG7YHR171W COX13P32799 129 aa5.28□□□□□ -1.56
ATG7YHR171W YKL187CP34231 750 aa5.28□□□□□ -1.56
ATG7YHR171W FLO10P36170 1169 aa5.28□□□□□ -1.56
ATG7YHR171W PHO90P39535 881 aa5.28□□□□□ -1.56
ATG7YHR171W HAT2P39984 401 aa5.28□□□□□ -1.56
ATG7YHR171W SNZ3P43545 298 aa5.28□□□□□ -1.56
ATG7YHR171W VEL1P53058 206 aa5.28□□□□□ -1.56
ATG7YHR171W GPI1P53306 609 aa5.28□□□□□ -1.56
ATG7YHR171W SNZ2P53824 298 aa5.28□□□□□ -1.56
ATG7YHR171W VAC7P53950 1165 aa5.28□□□□□ -1.56
ATG7YHR171W SEC10Q06245 871 aa5.28□□□□□ -1.56
ATG7YHR171W MCH4Q08268 501 aa5.28□□□□□ -1.56
ATG7YHR171W MCA1Q08601 432 aa5.28□□□□□ -1.56
ATG7YHR171W PGK1P00560 416 aaKnown RBP5.27□□□□□ -1.57
ATG7YHR171W TEF1P02994 458 aaKnown RBP5.27□□□□□ -1.57
ATG7YHR171W ALG7P07286 448 aa5.27□□□□□ -1.57
ATG7YHR171W MRPL8P22353 238 aa5.27□□□□□ -1.57
ATG7YHR171W BMH1P29311 267 aaKnown RBP5.27□□□□□ -1.57
ATG7YHR171W BMT2P38278 337 aa5.27□□□□□ -1.57
ATG7YHR171W IKI1P38874 309 aa5.27□□□□□ -1.57
ATG7YHR171W RPH1P39956 796 aa5.27□□□□□ -1.57
ATG7YHR171W TAD2P47058 250 aa5.27□□□□□ -1.57
ATG7YHR171W YIP1P53039 248 aa5.27□□□□□ -1.57
ATG7YHR171W MRS2Q01926 470 aa5.27□□□□□ -1.57
ATG7YHR171W YPL077CQ02831 240 aa5.27□□□□□ -1.57
ATG7YHR171W YDL144CQ07589 356 aa5.27□□□□□ -1.57
ATG7YHR171W GAT3Q07928 141 aa5.27□□□□□ -1.57
ATG7YHR171W RGT2Q12300 763 aa5.27□□□□□ -1.57
ATG7YHR171W YOP1Q12402 180 aa5.27□□□□□ -1.57
ATG7YHR171W ATO2P32907 282 aa5.26□□□□□ -1.57
ATG7YHR171W YBR056WP38081 501 aa5.26□□□□□ -1.57
ATG7YHR171W RFT1P38206 574 aaPredicted RBP5.26□□□□□ -1.57
ATG7YHR171W LYS1P38998 373 aaRIP-Chip data5.26□□□□□ -1.57 RIP-Chip
ATG7YHR171W ALG8P40351 577 aa5.26□□□□□ -1.57
ATG7YHR171W IDP2P41939 412 aa5.26□□□□□ -1.57
ATG7YHR171W DIG1Q03063 452 aaKnown RBP5.26□□□□□ -1.57
ATG7YHR171W SLD5Q03406 294 aa5.26□□□□□ -1.57
ATG7YHR171W DIC1Q06143 298 aa5.26□□□□□ -1.57
ATG7YHR171W PLB3Q08108 686 aa5.26□□□□□ -1.57
ATG7YHR171W RPS13P05756 151 aaKnown RBP5.26□□□□□ -1.57
ATG7YHR171W YCR102CP25608 368 aa5.26□□□□□ -1.57
ATG7YHR171W PRX1P34227 261 aaKnown RBP5.26□□□□□ -1.57
ATG7YHR171W DBP7P36120 742 aaKnown RBP5.26□□□□□ -1.57
ATG7YHR171W POP7P38291 140 aa5.26□□□□□ -1.57
ATG7YHR171W SOP4P39543 234 aaPredicted RBP5.26□□□□□ -1.57
ATG7YHR171W CTF19Q02732 369 aa5.26□□□□□ -1.57
ATG7YHR171W IRC4Q03036 179 aa5.26□□□□□ -1.57
ATG7YHR171W YPL034WQ03083 165 aa5.26□□□□□ -1.57
ATG7YHR171W GIS1Q03833 894 aa5.26□□□□□ -1.57
ATG7YHR171W PEX10Q05568 337 aa5.26□□□□□ -1.57
ATG7YHR171W THI72Q08579 599 aa5.26□□□□□ -1.57
ATG7YHR171W YOR389WQ08912 624 aa5.26□□□□□ -1.57
ATG7YHR171W RPL31AP0C2H8 113 aaKnown RBP5.25□□□□□ -1.57
ATG7YHR171W RNA15P25299 296 aaPredicted RBP5.25□□□□□ -1.57
ATG7YHR171W YCR007CP25354 239 aa5.25□□□□□ -1.57
ATG7YHR171W SNC1P31109 117 aa5.25□□□□□ -1.57
ATG7YHR171W ZRT1P32804 376 aa5.25□□□□□ -1.57
ATG7YHR171W CSE1P33307 960 aa5.25□□□□□ -1.57
ATG7YHR171W FIG1P38224 298 aa5.25□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 27.6 ms