RNA–Protein interactions for RNA: YGL180W

ATG1, Transcript of Protein serine/threonine kinase, yeast

Gene ATG1, Length 2,694 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATG1	YGL180W	SHS1	Q07657	551 aa		4.64	□□□□□ -1.67
ATG1	YGL180W	YDL109C	Q12103	647 aa		4.64	□□□□□ -1.67
ATG1	YGL180W	YLR049C	Q12110	428 aa		4.64	□□□□□ -1.67
ATG1	YGL180W	RIO1	Q12196	484 aa	Known RBP	4.64	□□□□□ -1.67
ATG1	YGL180W	TUB1	P09733	447 aa	Known RBP	4.64	□□□□□ -1.67
ATG1	YGL180W	MATALPHA2	P0CY08	210 aa		4.64	□□□□□ -1.67
ATG1	YGL180W	HMLALPHA2	P0CY09	210 aa		4.64	□□□□□ -1.67
ATG1	YGL180W	NHP6B	P11633	99 aa	Known RBP	4.64	□□□□□ -1.67
ATG1	YGL180W	SEN2	P16658	377 aa		4.64	□□□□□ -1.67
ATG1	YGL180W	ARF2	P19146	181 aa	Known RBP	4.64	□□□□□ -1.67
ATG1	YGL180W	DAL82	P21705	255 aa		4.64	□□□□□ -1.67
ATG1	YGL180W	LSB5	P25369	354 aa		4.64	□□□□□ -1.67
ATG1	YGL180W	TMT1	P32643	299 aa		4.64	□□□□□ -1.67
ATG1	YGL180W	PPZ2	P33329	710 aa		4.64	□□□□□ -1.67
ATG1	YGL180W	OSH3	P38713	996 aa	Known RBP	4.64	□□□□□ -1.67
ATG1	YGL180W	GDS1	P41913	522 aa		4.64	□□□□□ -1.67
ATG1	YGL180W	AIM24	P47127	394 aa		4.64	□□□□□ -1.67
ATG1	YGL180W	PHB2	P50085	310 aa		4.64	□□□□□ -1.67
ATG1	YGL180W	NIF3	P53081	288 aa		4.64	□□□□□ -1.67
ATG1	YGL180W	FRE4	P53746	719 aa		4.64	□□□□□ -1.67
ATG1	YGL180W	KIN4	Q01919	800 aa		4.64	□□□□□ -1.67
ATG1	YGL180W	YSR3	P23501	404 aa		4.63	□□□□□ -1.67
ATG1	YGL180W	ERG9	P29704	444 aa		4.63	□□□□□ -1.67
ATG1	YGL180W	PCL5	P38794	229 aa		4.63	□□□□□ -1.67
ATG1	YGL180W	YER121W	P40076	114 aa		4.63	□□□□□ -1.67
ATG1	YGL180W	YRB1	P41920	201 aa	Known RBP	4.63	□□□□□ -1.67
ATG1	YGL180W	CTK3	P46963	296 aa	Predicted RBP	4.63	□□□□□ -1.67
ATG1	YGL180W	SSN8	P47821	323 aa		4.63	□□□□□ -1.67
ATG1	YGL180W	ADH6	Q04894	360 aa	Known RBP	4.63	□□□□□ -1.67
ATG1	YGL180W	BER1	Q06688	274 aa	Known RBP	4.63	□□□□□ -1.67
ATG1	YGL180W	PBP4	Q07362	185 aa	Known RBP	4.63	□□□□□ -1.67
ATG1	YGL180W	YDL218W	Q07629	317 aa		4.63	□□□□□ -1.67
ATG1	YGL180W	SLM3	Q12093	417 aa		4.63	□□□□□ -1.67
ATG1	YGL180W	RPL31A	P0C2H8	113 aa	Known RBP	4.63	□□□□□ -1.67
ATG1	YGL180W	YCR102C	P25608	368 aa		4.63	□□□□□ -1.67
ATG1	YGL180W	BMH1	P29311	267 aa	Known RBP	4.63	□□□□□ -1.67
ATG1	YGL180W	SNC1	P31109	117 aa		4.63	□□□□□ -1.67
ATG1	YGL180W	YKL071W	P36086	256 aa		4.63	□□□□□ -1.67
ATG1	YGL180W	YBR096W	P38256	230 aa		4.63	□□□□□ -1.67
ATG1	YGL180W	YAT2	P40017	923 aa		4.63	□□□□□ -1.67
ATG1	YGL180W	GAT1	P43574	510 aa		4.63	□□□□□ -1.67
ATG1	YGL180W	HMS2	P47175	358 aa		4.63	□□□□□ -1.67
ATG1	YGL180W	IRC4	Q03036	179 aa		4.63	□□□□□ -1.67
ATG1	YGL180W	RRP17	Q04031	235 aa	Predicted RBP	4.63	□□□□□ -1.67
ATG1	YGL180W	PFA4	Q12006	378 aa		4.63	□□□□□ -1.67
ATG1	YGL180W	PUT3	P25502	979 aa	Predicted RBP	4.62	□□□□□ -1.67
ATG1	YGL180W	MCR1	P36060	302 aa	Known RBP	4.62	□□□□□ -1.67
ATG1	YGL180W	AGE2	P40529	298 aa		4.62	□□□□□ -1.67
ATG1	YGL180W	GUF1	P46943	645 aa		4.62	□□□□□ -1.67
ATG1	YGL180W	ORC5	P50874	479 aa		4.62	□□□□□ -1.67
ATG1	YGL180W	GPI1	P53306	609 aa		4.62	□□□□□ -1.67
ATG1	YGL180W	PRP38	Q00723	242 aa	Predicted RBP	4.62	□□□□□ -1.67
ATG1	YGL180W	RPN6	Q12377	434 aa		4.62	□□□□□ -1.67
ATG1	YGL180W	YOP1	Q12402	180 aa		4.62	□□□□□ -1.67
ATG1	YGL180W	CHA1	P25379	360 aa	Known RBP	4.62	□□□□□ -1.67
ATG1	YGL180W	HRR25	P29295	494 aa	Known RBP	4.62	□□□□□ -1.67
ATG1	YGL180W	MEI4	P29467	408 aa		4.62	□□□□□ -1.67
ATG1	YGL180W	PRO3	P32263	286 aa	Known RBP	4.62	□□□□□ -1.67
ATG1	YGL180W	TOD6	P34219	525 aa		4.62	□□□□□ -1.67
ATG1	YGL180W	YBR137W	P38276	179 aa		4.62	□□□□□ -1.67
ATG1	YGL180W	YNL194C	P40169	301 aa		4.62	□□□□□ -1.67
ATG1	YGL180W	ALG8	P40351	577 aa		4.62	□□□□□ -1.67
ATG1	YGL180W	ICE2	P40499	491 aa		4.62	□□□□□ -1.67
ATG1	YGL180W	CTF19	Q02732	369 aa		4.62	□□□□□ -1.67
ATG1	YGL180W	RGS2	Q99188	309 aa		4.62	□□□□□ -1.67
ATG1	YGL180W	TPI1	P00942	248 aa	Known RBP	4.61	□□□□□ -1.67
ATG1	YGL180W	PAB1	P04147	577 aa	Known RBP RIP-Chip data	4.61	□□□□□ -1.67	not detected
ATG1	YGL180W	SLM5	P25345	492 aa	Known RBP	4.61	□□□□□ -1.67
ATG1	YGL180W	GIT1	P25346	518 aa		4.61	□□□□□ -1.67
ATG1	YGL180W	YCR022C	P25620	114 aa		4.61	□□□□□ -1.67
ATG1	YGL180W	REC114	P32841	428 aa		4.61	□□□□□ -1.67
ATG1	YGL180W	PRS2	P38620	318 aa	Known RBP	4.61	□□□□□ -1.67
ATG1	YGL180W	FHL1	P39521	936 aa		4.61	□□□□□ -1.67
ATG1	YGL180W	SEC10	Q06245	871 aa		4.61	□□□□□ -1.67
ATG1	YGL180W	CDD1	Q06549	142 aa		4.61	□□□□□ -1.67
ATG1	YGL180W	EDE1	P34216	1381 aa		4.61	□□□□□ -1.67
ATG1	YGL180W	YMR31	P19955	123 aa		4.61	□□□□□ -1.67
ATG1	YGL180W	POP5	P28005	173 aa		4.61	□□□□□ -1.67
ATG1	YGL180W	IES6	P32617	166 aa		4.61	□□□□□ -1.67
ATG1	YGL180W	YJR079W	P47126	109 aa		4.61	□□□□□ -1.67
ATG1	YGL180W	ECM11	Q04110	302 aa		4.61	□□□□□ -1.67
ATG1	YGL180W	SLF1	Q12034	447 aa	Known RBP	4.61	□□□□□ -1.67
ATG1	YGL180W	BSC1	Q12140	328 aa		4.61	□□□□□ -1.67
ATG1	YGL180W	RAD7	P06779	565 aa		4.6	□□□□□ -1.67
ATG1	YGL180W	VPS1	P21576	704 aa	Known RBP	4.6	□□□□□ -1.67
ATG1	YGL180W	RPL24B	P24000	155 aa	Known RBP	4.6	□□□□□ -1.67
ATG1	YGL180W	NDC1	P32500	655 aa		4.6	□□□□□ -1.67
ATG1	YGL180W	BMT2	P38278	337 aa		4.6	□□□□□ -1.67
ATG1	YGL180W	LYS1	P38998	373 aa	RIP-Chip data	4.6	□□□□□ -1.67	RIP-Chip
ATG1	YGL180W	SLX9	P53251	210 aa	Predicted RBP	4.6	□□□□□ -1.67
ATG1	YGL180W	TRM44	Q02648	567 aa	Known RBP	4.6	□□□□□ -1.67
ATG1	YGL180W	MFG1	Q07684	458 aa		4.6	□□□□□ -1.67
ATG1	YGL180W	GAS1	P22146	559 aa	Known RBP	4.6	□□□□□ -1.67
ATG1	YGL180W	PRR1	P28708	518 aa		4.6	□□□□□ -1.67
ATG1	YGL180W	PRX1	P34227	261 aa	Known RBP	4.6	□□□□□ -1.67
ATG1	YGL180W	YPT52	P36018	234 aa	Known RBP	4.6	□□□□□ -1.67
ATG1	YGL180W	DBP7	P36120	742 aa	Known RBP	4.6	□□□□□ -1.67
ATG1	YGL180W	SUL1	P38359	859 aa		4.6	□□□□□ -1.67
ATG1	YGL180W	DDI1	P40087	428 aa		4.6	□□□□□ -1.67
ATG1	YGL180W	MMF1	P40185	145 aa	Known RBP	4.6	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 12.9 ms