RNA–Protein interactions for RNA: YFR052W

RPN12, Transcript of Subunit of the 19S regulatory particle of the 26S proteasome lid, yeast

Gene RPN12, Length 825 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN12	YFR052W	NCE101	Q02820	53 aa		4.59	□□□□□ -1.67
RPN12	YFR052W	RIM13	Q03792	727 aa		4.59	□□□□□ -1.67
RPN12	YFR052W	MIX14	Q04341	121 aa		4.59	□□□□□ -1.67
RPN12	YFR052W	KRE28	Q04431	385 aa		4.59	□□□□□ -1.67
RPN12	YFR052W	ARV1	Q06541	321 aa		4.59	□□□□□ -1.67
RPN12	YFR052W	SWA2	Q06677	668 aa		4.59	□□□□□ -1.67
RPN12	YFR052W	YDL218W	Q07629	317 aa		4.59	□□□□□ -1.67
RPN12	YFR052W	PRS5	Q12265	496 aa	Known RBP	4.59	□□□□□ -1.67
RPN12	YFR052W	YDL199C	Q12407	687 aa		4.59	□□□□□ -1.67
RPN12	YFR052W	RPL43A	P0CX25	92 aa	Known RBP	4.58	□□□□□ -1.68
RPN12	YFR052W	RPL43B	P0CX26	92 aa		4.58	□□□□□ -1.68
RPN12	YFR052W	CTA1	P15202	515 aa		4.58	□□□□□ -1.68
RPN12	YFR052W	DBP3	P20447	523 aa	Known RBP	4.58	□□□□□ -1.68
RPN12	YFR052W	DMC1	P25453	334 aa		4.58	□□□□□ -1.68
RPN12	YFR052W	RER1	P25560	188 aa		4.58	□□□□□ -1.68
RPN12	YFR052W	TFC1	P32367	649 aa		4.58	□□□□□ -1.68
RPN12	YFR052W	YPT7	P32939	208 aa		4.58	□□□□□ -1.68
RPN12	YFR052W	TEF4	P36008	412 aa	Known RBP	4.58	□□□□□ -1.68
RPN12	YFR052W	HRB1	P38922	454 aa	Known RBP RIP-Chip data	4.58	□□□□□ -1.68	not detected
RPN12	YFR052W	TAT2	P38967	592 aa		4.58	□□□□□ -1.68
RPN12	YFR052W	SWD1	P39706	426 aa		4.58	□□□□□ -1.68
RPN12	YFR052W	MPM1	P40364	252 aa		4.58	□□□□□ -1.68
RPN12	YFR052W	YJR142W	P47173	342 aa		4.58	□□□□□ -1.68
RPN12	YFR052W	TOM22	P49334	152 aa		4.58	□□□□□ -1.68
RPN12	YFR052W	TWF1	P53250	332 aa		4.58	□□□□□ -1.68
RPN12	YFR052W	SPR6	Q01684	191 aa		4.58	□□□□□ -1.68
RPN12	YFR052W	SVL3	Q03088	825 aa	Known RBP	4.58	□□□□□ -1.68
RPN12	YFR052W	RSN1	Q03516	953 aa		4.58	□□□□□ -1.68
RPN12	YFR052W	PEX12	Q04370	399 aa		4.58	□□□□□ -1.68
RPN12	YFR052W	YLR446W	Q06204	433 aa		4.58	□□□□□ -1.68
RPN12	YFR052W	THP1	Q08231	455 aa		4.58	□□□□□ -1.68
RPN12	YFR052W	RRG7	Q08774	242 aa	Predicted RBP	4.58	□□□□□ -1.68
RPN12	YFR052W	PFK27	Q12471	397 aa	Predicted RBP	4.58	□□□□□ -1.68
RPN12	YFR052W	MHF2	Q3E829	80 aa		4.58	□□□□□ -1.68
RPN12	YFR052W	YOS9	Q99220	542 aa		4.58	□□□□□ -1.68
RPN12	YFR052W	KSS1	P14681	368 aa		4.57	□□□□□ -1.68
RPN12	YFR052W	ERD1	P16151	362 aa		4.57	□□□□□ -1.68
RPN12	YFR052W	CMK2	P22517	447 aa		4.57	□□□□□ -1.68
RPN12	YFR052W	ERG8	P24521	451 aa		4.57	□□□□□ -1.68
RPN12	YFR052W	RAD51	P25454	400 aa		4.57	□□□□□ -1.68
RPN12	YFR052W	SAC1	P32368	623 aa	Known RBP	4.57	□□□□□ -1.68
RPN12	YFR052W	RPN2	P32565	945 aa	Known RBP	4.57	□□□□□ -1.68
RPN12	YFR052W	RIB1	P38066	345 aa		4.57	□□□□□ -1.68
RPN12	YFR052W	NSG1	P38837	291 aa		4.57	□□□□□ -1.68
RPN12	YFR052W	RSP5	P39940	809 aa	Known RBP	4.57	□□□□□ -1.68
RPN12	YFR052W	PKP1	P40530	394 aa		4.57	□□□□□ -1.68
RPN12	YFR052W	MET28	P40573	187 aa		4.57	□□□□□ -1.68
RPN12	YFR052W	YGR201C	P42936	225 aa		4.57	□□□□□ -1.68
RPN12	YFR052W	PDR16	P53860	351 aa	Known RBP	4.57	□□□□□ -1.68
RPN12	YFR052W	PFA5	Q03289	374 aa		4.57	□□□□□ -1.68
RPN12	YFR052W	YLR352W	Q06479	807 aa		4.57	□□□□□ -1.68
RPN12	YFR052W	VPS36	Q06696	566 aa		4.57	□□□□□ -1.68
RPN12	YFR052W	PSR1	Q07800	427 aa		4.57	□□□□□ -1.68
RPN12	YFR052W	RRT8	Q08219	342 aa		4.57	□□□□□ -1.68
RPN12	YFR052W	YOR032W-A	Q8TGS1	66 aa		4.57	□□□□□ -1.68
RPN12	YFR052W	SIR3	P06701	978 aa		4.56	□□□□□ -1.68
RPN12	YFR052W	YFR010W-A	P0C5N0	62 aa		4.56	□□□□□ -1.68
RPN12	YFR052W	PET9	P18239	318 aa	Known RBP	4.56	□□□□□ -1.68
RPN12	YFR052W	ERD2	P18414	219 aa		4.56	□□□□□ -1.68
RPN12	YFR052W	GRR1	P24814	1151 aa		4.56	□□□□□ -1.68
RPN12	YFR052W	NUF2	P33895	451 aa		4.56	□□□□□ -1.68
RPN12	YFR052W	TPO5	P36029	618 aa		4.56	□□□□□ -1.68
RPN12	YFR052W	SNU114	P36048	1008 aa	Known RBP	4.56	□□□□□ -1.68
RPN12	YFR052W	APD1	P38281	316 aa		4.56	□□□□□ -1.68
RPN12	YFR052W	YJL193W	P39542	402 aa		4.56	□□□□□ -1.68
RPN12	YFR052W	SHE4	P51534	789 aa		4.56	□□□□□ -1.68
RPN12	YFR052W	LSG1	P53145	640 aa	Known RBP	4.56	□□□□□ -1.68
RPN12	YFR052W	MEP3	P53390	489 aa		4.56	□□□□□ -1.68
RPN12	YFR052W	YNR068C	P53754	272 aa		4.56	□□□□□ -1.68
RPN12	YFR052W	EKI1	Q03764	534 aa		4.56	□□□□□ -1.68
RPN12	YFR052W	ERB1	Q04660	807 aa	Known RBP	4.56	□□□□□ -1.68
RPN12	YFR052W	ATG38	Q05789	226 aa	Known RBP	4.56	□□□□□ -1.68
RPN12	YFR052W	DCR2	Q05924	578 aa		4.56	□□□□□ -1.68
RPN12	YFR052W	ARO10	Q06408	635 aa		4.56	□□□□□ -1.68
RPN12	YFR052W	RSA1	Q08932	381 aa		4.56	□□□□□ -1.68
RPN12	YFR052W	FMP40	Q08968	688 aa	Predicted RBP	4.56	□□□□□ -1.68
RPN12	YFR052W	YDL211C	Q12121	372 aa		4.56	□□□□□ -1.68
RPN12	YFR052W	BAG7	Q12128	409 aa		4.56	□□□□□ -1.68
RPN12	YFR052W	PSY3	Q12318	242 aa		4.56	□□□□□ -1.68
RPN12	YFR052W	MDM12	Q92328	271 aa		4.56	□□□□□ -1.68
RPN12	YFR052W	YOL087C	Q99247	1116 aa		4.56	□□□□□ -1.68
RPN12	YFR052W	DBP2	P24783	546 aa	Known RBP	4.55	□□□□□ -1.68
RPN12	YFR052W	PBN1	P25580	416 aa		4.55	□□□□□ -1.68
RPN12	YFR052W	CWH43	P25618	953 aa		4.55	□□□□□ -1.68
RPN12	YFR052W	PTC6	P25646	442 aa		4.55	□□□□□ -1.68
RPN12	YFR052W	HBS1	P32769	611 aa	Known RBP	4.55	□□□□□ -1.68
RPN12	YFR052W	ARC19	P33204	171 aa	Known RBP	4.55	□□□□□ -1.68
RPN12	YFR052W	YHR097C	P38809	366 aa	Known RBP	4.55	□□□□□ -1.68
RPN12	YFR052W	RIX1	P38883	763 aa	Predicted RBP	4.55	□□□□□ -1.68
RPN12	YFR052W	YER010C	P40011	234 aa		4.55	□□□□□ -1.68
RPN12	YFR052W	SOK1	P40317	901 aa		4.55	□□□□□ -1.68
RPN12	YFR052W	YIL067C	P40514	678 aa		4.55	□□□□□ -1.68
RPN12	YFR052W	REE1	P40893	198 aa		4.55	□□□□□ -1.68
RPN12	YFR052W	SNM1	P40993	198 aa		4.55	□□□□□ -1.68
RPN12	YFR052W	YFL054C	P43549	646 aa		4.55	□□□□□ -1.68
RPN12	YFR052W	CAK1	P43568	368 aa	Predicted RBP	4.55	□□□□□ -1.68
RPN12	YFR052W	MRK1	P50873	501 aa		4.55	□□□□□ -1.68
RPN12	YFR052W	RMR1	P53060	241 aa		4.55	□□□□□ -1.68
RPN12	YFR052W	YGR016W	P53209	190 aa		4.55	□□□□□ -1.68
RPN12	YFR052W	YNL095C	P53932	642 aa		4.55	□□□□□ -1.68

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