RNA–Protein interactions for RNA: YFL038C

YPT1, Transcript of Rab family GTPase, yeastyeast

Gene YPT1, Length 621 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPT1YFL038C SFA1P32771 386 aa6.03□□□□□ -1.44
YPT1YFL038C ORC2P32833 620 aa6.03□□□□□ -1.44
YPT1YFL038C MSN2P33748 704 aa6.03□□□□□ -1.44
YPT1YFL038C SHE2P36068 246 aaKnown RBP RIP-Chip data6.03□□□□□ -1.44not detected
YPT1YFL038C YKL077WP36081 392 aa6.03□□□□□ -1.44
YPT1YFL038C RTC2P38279 296 aa6.03□□□□□ -1.44
YPT1YFL038C YAL037WP39728 267 aa6.03□□□□□ -1.44
YPT1YFL038C ZIM17P42844 174 aa6.03□□□□□ -1.44
YPT1YFL038C PGA1P53896 198 aa6.03□□□□□ -1.44
YPT1YFL038C REC102Q02721 264 aa6.03□□□□□ -1.44
YPT1YFL038C PLB2Q03674 706 aa6.03□□□□□ -1.44
YPT1YFL038C SPC19Q03954 165 aa6.03□□□□□ -1.44
YPT1YFL038C YML096WQ04489 525 aa6.03□□□□□ -1.44
YPT1YFL038C YMR315WQ04869 349 aaKnown RBP6.03□□□□□ -1.44
YPT1YFL038C CDA2Q06703 312 aa6.03□□□□□ -1.44
YPT1YFL038C SYO1Q07395 620 aa6.03□□□□□ -1.44
YPT1YFL038C YEH1Q07804 573 aa6.03□□□□□ -1.44
YPT1YFL038C YOR283WQ12040 230 aaKnown RBP6.03□□□□□ -1.44
YPT1YFL038C BAG7Q12128 409 aa6.03□□□□□ -1.44
YPT1YFL038C YOL107WQ12239 342 aa6.03□□□□□ -1.44
YPT1YFL038C GLO4Q12320 285 aa6.03□□□□□ -1.44
YPT1YFL038C FLP1P03870 423 aa6.02□□□□□ -1.45
YPT1YFL038C CAN1P04817 590 aa6.02□□□□□ -1.45
YPT1YFL038C SPS2P08459 502 aa6.02□□□□□ -1.45
YPT1YFL038C BET2P20133 325 aa6.02□□□□□ -1.45
YPT1YFL038C RPA135P22138 1203 aaKnown RBP6.02□□□□□ -1.45
YPT1YFL038C EXG1P23776 448 aaKnown RBP6.02□□□□□ -1.45
YPT1YFL038C FPS1P23900 669 aa6.02□□□□□ -1.45
YPT1YFL038C ARC19P33204 171 aaKnown RBP6.02□□□□□ -1.45
YPT1YFL038C ECT1P33412 323 aa6.02□□□□□ -1.45
YPT1YFL038C YKL097CP34245 136 aa6.02□□□□□ -1.45
YPT1YFL038C TMA19P35691 167 aaKnown RBP6.02□□□□□ -1.45
YPT1YFL038C YKL063CP35725 167 aa6.02□□□□□ -1.45
YPT1YFL038C YOR062CP36025 268 aa6.02□□□□□ -1.45
YPT1YFL038C PAU24P38155 120 aa6.02□□□□□ -1.45
YPT1YFL038C HPA3P39979 161 aa6.02□□□□□ -1.45
YPT1YFL038C YIL165CP40446 119 aa6.02□□□□□ -1.45
YPT1YFL038C ICE2P40499 491 aa6.02□□□□□ -1.45
YPT1YFL038C RPL10P41805 221 aaKnown RBP6.02□□□□□ -1.45
YPT1YFL038C LSB3P43603 459 aaKnown RBP6.02□□□□□ -1.45
YPT1YFL038C RPE1P46969 238 aa6.02□□□□□ -1.45
YPT1YFL038C COQ5P49017 307 aa6.02□□□□□ -1.45
YPT1YFL038C TOS2P50078 622 aa6.02□□□□□ -1.45
YPT1YFL038C RNH70P53331 553 aa6.02□□□□□ -1.45
YPT1YFL038C PAU12P53343 120 aa6.02□□□□□ -1.45
YPT1YFL038C YDR541CQ03049 344 aa6.02□□□□□ -1.45
YPT1YFL038C RSM28Q03430 361 aa6.02□□□□□ -1.45
YPT1YFL038C HPF1Q05164 967 aa6.02□□□□□ -1.45
YPT1YFL038C ASR1Q06834 288 aa6.02□□□□□ -1.45
YPT1YFL038C MMT2Q08970 484 aa6.02□□□□□ -1.45
YPT1YFL038C YOR214CQ12282 236 aa6.02□□□□□ -1.45
YPT1YFL038C RTR2Q12378 196 aa6.02□□□□□ -1.45
YPT1YFL038C FRE6Q12473 712 aa6.02□□□□□ -1.45
YPT1YFL038C HIS3P06633 220 aa6.01□□□□□ -1.45
YPT1YFL038C STE12P13574 688 aa6.01□□□□□ -1.45
YPT1YFL038C HOP1P20050 605 aa6.01□□□□□ -1.45
YPT1YFL038C PPH21P23594 369 aa6.01□□□□□ -1.45
YPT1YFL038C ERG9P29704 444 aa6.01□□□□□ -1.45
YPT1YFL038C SNC1P31109 117 aa6.01□□□□□ -1.45
YPT1YFL038C FUN26P31381 517 aa6.01□□□□□ -1.45
YPT1YFL038C YMC1P32331 307 aa6.01□□□□□ -1.45
YPT1YFL038C KRE6P32486 720 aa6.01□□□□□ -1.45
YPT1YFL038C DOA4P32571 926 aa6.01□□□□□ -1.45
YPT1YFL038C JEN1P36035 616 aa6.01□□□□□ -1.45
YPT1YFL038C ANR2P36090 516 aaPredicted RBP6.01□□□□□ -1.45
YPT1YFL038C FMP46P36141 133 aaKnown RBP6.01□□□□□ -1.45
YPT1YFL038C TAT1P38085 619 aa6.01□□□□□ -1.45
YPT1YFL038C MCM7P38132 845 aa6.01□□□□□ -1.45
YPT1YFL038C IFA38P38286 347 aa6.01□□□□□ -1.45
YPT1YFL038C SNX4P47057 423 aa6.01□□□□□ -1.45
YPT1YFL038C MDE1P47095 244 aa6.01□□□□□ -1.45
YPT1YFL038C PMT5P52867 743 aa6.01□□□□□ -1.45
YPT1YFL038C YGL235WP53071 178 aa6.01□□□□□ -1.45
YPT1YFL038C FHN1P53279 174 aa6.01□□□□□ -1.45
YPT1YFL038C YNR061CP53747 219 aa6.01□□□□□ -1.45
YPT1YFL038C YLR283WQ05867 314 aa6.01□□□□□ -1.45
YPT1YFL038C LEU9Q12166 604 aaKnown RBP6.01□□□□□ -1.45
YPT1YFL038C MDM32Q12171 622 aa6.01□□□□□ -1.45
YPT1YFL038C YLR099W-AQ3E798 87 aa6.01□□□□□ -1.45
YPT1YFL038C DET1Q99288 334 aaKnown RBP6.01□□□□□ -1.45
YPT1YFL038C FUS1P11710 512 aa6□□□□□ -1.45
YPT1YFL038C YCR102CP25608 368 aa6□□□□□ -1.45
YPT1YFL038C YCR016WP25617 290 aaKnown RBP6□□□□□ -1.45
YPT1YFL038C RNP1P32385 249 aa6□□□□□ -1.45
YPT1YFL038C SPT23P35210 1082 aa6□□□□□ -1.45
YPT1YFL038C DTR1P38125 572 aa6□□□□□ -1.45
YPT1YFL038C THI2P38141 450 aa6□□□□□ -1.45
YPT1YFL038C MSS4P38994 779 aa6□□□□□ -1.45
YPT1YFL038C NAB3P38996 802 aaKnown RBP RIP-Chip data6□□□□□ -1.45not detected
YPT1YFL038C PRP39P39682 629 aaKnown RBP6□□□□□ -1.45
YPT1YFL038C LRO1P40345 661 aa6□□□□□ -1.45
YPT1YFL038C VNX1P42839 908 aa6□□□□□ -1.45
YPT1YFL038C YGR210CP42942 411 aa6□□□□□ -1.45
YPT1YFL038C NGL2Q03264 515 aaKnown RBP6□□□□□ -1.45
YPT1YFL038C SNT309Q06091 175 aaPredicted RBP6□□□□□ -1.45
YPT1YFL038C RRP9Q06506 573 aaKnown RBP6□□□□□ -1.45
YPT1YFL038C YNG1Q08465 219 aa6□□□□□ -1.45
YPT1YFL038C IRC13Q08630 104 aa6□□□□□ -1.45
YPT1YFL038C ATG41Q12048 136 aa6□□□□□ -1.45
YPT1YFL038C YDL177CQ12257 170 aa6□□□□□ -1.45
Retrieved 100 of 5,963 RNA–protein pairs in 17.3 ms