RNA–Protein interactions for RNA: YER164W

CHD1, Transcript of Chromatin remodeler that regulates various aspects of transcription, yeastyeast

Gene CHD1, Length 4,407 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CHD1YER164W ADO1P47143 340 aaKnown RBP3.55□□□□□ -1.84
CHD1YER164W GCV1P48015 400 aa3.55□□□□□ -1.84
CHD1YER164W RMD9P53140 646 aaKnown RBP3.55□□□□□ -1.84
CHD1YER164W NPY1P53164 384 aa3.55□□□□□ -1.84
CHD1YER164W RSM27P53305 110 aa3.55□□□□□ -1.84
CHD1YER164W SAE3P89114 91 aa3.55□□□□□ -1.84
CHD1YER164W AAT1Q01802 451 aa3.55□□□□□ -1.84
CHD1YER164W GRX5Q02784 150 aa3.55□□□□□ -1.84
CHD1YER164W YMR206WQ03695 313 aa3.55□□□□□ -1.84
CHD1YER164W RKM5Q12367 367 aa3.55□□□□□ -1.84
CHD1YER164W ICT1Q12385 394 aa3.55□□□□□ -1.84
CHD1YER164W TMA17Q12513 150 aa3.55□□□□□ -1.84
CHD1YER164W AAC1P04710 309 aa3.55□□□□□ -1.84
CHD1YER164W FUN14P18411 198 aa3.55□□□□□ -1.84
CHD1YER164W RRP7P25368 297 aaPredicted RBP3.55□□□□□ -1.84
CHD1YER164W PHO91P27514 894 aa3.55□□□□□ -1.84
CHD1YER164W PAN3P36102 679 aaPredicted RBP3.55□□□□□ -1.84
CHD1YER164W APL3P38065 1025 aa3.55□□□□□ -1.84
CHD1YER164W ARO9P38840 513 aaPredicted RBP3.55□□□□□ -1.84
CHD1YER164W UIP3P39547 235 aa3.55□□□□□ -1.84
CHD1YER164W MEP1P40260 492 aa3.55□□□□□ -1.84
CHD1YER164W YIL161WP40449 235 aaKnown RBP3.55□□□□□ -1.84
CHD1YER164W TED1P40533 473 aa3.55□□□□□ -1.84
CHD1YER164W NSE4P43124 402 aa3.55□□□□□ -1.84
CHD1YER164W GAT1P43574 510 aa3.55□□□□□ -1.84
CHD1YER164W VPS25P47142 202 aa3.55□□□□□ -1.84
CHD1YER164W YNL143CP53908 130 aa3.55□□□□□ -1.84
CHD1YER164W PEX25Q02969 394 aa3.55□□□□□ -1.84
CHD1YER164W PEX30Q06169 523 aa3.55□□□□□ -1.84
CHD1YER164W SPC3Q12133 184 aa3.55□□□□□ -1.84
CHD1YER164W CCH1P50077 2039 aa3.55□□□□□ -1.84
CHD1YER164W DFR1P07807 211 aaKnown RBP RIP-Chip data3.54□□□□□ -1.84not detected
CHD1YER164W MRP1P10662 321 aaKnown RBP3.54□□□□□ -1.84
CHD1YER164W GAL3P13045 520 aa3.54□□□□□ -1.84
CHD1YER164W CMP2P14747 604 aa3.54□□□□□ -1.84
CHD1YER164W IDH2P28241 369 aaKnown RBP3.54□□□□□ -1.84
CHD1YER164W ACH1P32316 526 aa3.54□□□□□ -1.84
CHD1YER164W SUA5P32579 426 aa3.54□□□□□ -1.84
CHD1YER164W LHP1P33399 275 aaKnown RBP3.54□□□□□ -1.84
CHD1YER164W MTH1P35198 433 aa3.54□□□□□ -1.84
CHD1YER164W CIN5P40917 295 aa3.54□□□□□ -1.84
CHD1YER164W ACS1Q01574 713 aa3.54□□□□□ -1.84
CHD1YER164W FIT1Q04433 528 aa3.54□□□□□ -1.84
CHD1YER164W YLR040CQ07988 224 aa3.54□□□□□ -1.84
CHD1YER164W SAM4Q08985 325 aaKnown RBP3.54□□□□□ -1.84
CHD1YER164W MRX4Q12467 430 aa3.54□□□□□ -1.84
CHD1YER164W RRI1Q12468 440 aa3.54□□□□□ -1.84
CHD1YER164W ARO3P14843 370 aaKnown RBP3.54□□□□□ -1.84
CHD1YER164W MIH1P23748 554 aa3.54□□□□□ -1.84
CHD1YER164W PEX34P25584 144 aa3.54□□□□□ -1.84
CHD1YER164W URK1P27515 501 aa3.54□□□□□ -1.84
CHD1YER164W LDS1P31379 325 aa3.54□□□□□ -1.84
CHD1YER164W THI4P32318 326 aa3.54□□□□□ -1.84
CHD1YER164W PRS2P38620 318 aaKnown RBP3.54□□□□□ -1.84
CHD1YER164W MED6P38782 295 aa3.54□□□□□ -1.84
CHD1YER164W AXL2P38928 823 aa3.54□□□□□ -1.84
CHD1YER164W YAE1P47118 141 aaPredicted RBP3.54□□□□□ -1.84
CHD1YER164W BPL1P48445 690 aaPredicted RBP3.54□□□□□ -1.84
CHD1YER164W RIM21P48565 533 aa3.54□□□□□ -1.84
CHD1YER164W YGR035CP53222 116 aa3.54□□□□□ -1.84
CHD1YER164W RNH70P53331 553 aa3.54□□□□□ -1.84
CHD1YER164W RPC11Q04307 110 aaPredicted RBP3.54□□□□□ -1.84
CHD1YER164W ENV7Q12003 364 aa3.54□□□□□ -1.84
CHD1YER164W YPL066WQ12194 479 aa3.54□□□□□ -1.84
CHD1YER164W YCL012CQ8J0M4 134 aa3.54□□□□□ -1.84
CHD1YER164W SCH9P11792 824 aaKnown RBP3.54□□□□□ -1.84
CHD1YER164W RPB3P16370 318 aaKnown RBP3.54□□□□□ -1.84
CHD1YER164W SNC1P31109 117 aa3.54□□□□□ -1.84
CHD1YER164W DHR2P36009 735 aaPredicted RBP3.54□□□□□ -1.84
CHD1YER164W FRE2P36033 711 aa3.54□□□□□ -1.84
CHD1YER164W LDB7P38210 180 aa3.54□□□□□ -1.84
CHD1YER164W SPO73P40031 143 aa3.54□□□□□ -1.84
CHD1YER164W DOT6P40059 670 aaKnown RBP3.54□□□□□ -1.84
CHD1YER164W GAB1P41733 394 aa3.54□□□□□ -1.84
CHD1YER164W ALR2P43553 858 aa3.54□□□□□ -1.84
CHD1YER164W SIP4P46954 829 aa3.54□□□□□ -1.84
CHD1YER164W SFH5P47008 294 aa3.54□□□□□ -1.84
CHD1YER164W SLX9P53251 210 aaPredicted RBP3.54□□□□□ -1.84
CHD1YER164W TPS1Q00764 495 aaKnown RBP3.54□□□□□ -1.84
CHD1YER164W BLS1Q06071 122 aa3.54□□□□□ -1.84
CHD1YER164W THI73Q07904 523 aa3.54□□□□□ -1.84
CHD1YER164W PST1Q12355 444 aa3.54□□□□□ -1.84
CHD1YER164W PDH1Q12428 516 aaKnown RBP3.54□□□□□ -1.84
CHD1YER164W MER1P16523 270 aa3.54□□□□□ -1.84
CHD1YER164W IDH1P28834 360 aaKnown RBP RIP-Chip data3.54□□□□□ -1.84not detected
CHD1YER164W ATP11P32453 318 aa3.54□□□□□ -1.84
CHD1YER164W CDC12P32468 407 aaKnown RBP3.54□□□□□ -1.84
CHD1YER164W BNA4P38169 460 aa3.54□□□□□ -1.84
CHD1YER164W AIM46P38885 310 aa3.54□□□□□ -1.84
CHD1YER164W SOP4P39543 234 aaPredicted RBP3.54□□□□□ -1.84
CHD1YER164W JHD1P40034 492 aa3.54□□□□□ -1.84
CHD1YER164W BTT1P40314 149 aaPredicted RBP3.54□□□□□ -1.84
CHD1YER164W GTS1P40956 396 aa3.54□□□□□ -1.84
CHD1YER164W CTF19Q02732 369 aa3.54□□□□□ -1.84
CHD1YER164W SCP1Q08873 200 aa3.54□□□□□ -1.84
CHD1YER164W FDH1Q08911 376 aa3.54□□□□□ -1.84
CHD1YER164W PPQ1P32945 549 aa3.53□□□□□ -1.84
CHD1YER164W SHM2P37291 469 aaKnown RBP3.53□□□□□ -1.84
CHD1YER164W STS1P38637 319 aa3.53□□□□□ -1.84
CHD1YER164W IST3P40565 148 aaPredicted RBP3.53□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 32.2 ms