RNA–Protein interactions for RNA: YDR504C

SPG3, Transcript of Protein required for high temperature survival during stationary phase, yeastyeast

Gene SPG3, Length 384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPG3YDR504C ARX1Q03862 593 aaKnown RBP-0.17□□□□□ -2.44
SPG3YDR504C GAT3Q07928 141 aa-0.17□□□□□ -2.44
SPG3YDR504C RUP1Q12242 671 aa-0.17□□□□□ -2.44
SPG3YDR504C RNH203Q12338 110 aa-0.17□□□□□ -2.44
SPG3YDR504C STN1P38960 494 aa-0.18□□□□□ -2.44
SPG3YDR504C YJL027CP47063 138 aaPredicted RBP-0.18□□□□□ -2.44
SPG3YDR504C AEP3Q12089 606 aa-0.18□□□□□ -2.44
SPG3YDR504C DOA1P36037 715 aa-0.19□□□□□ -2.44
SPG3YDR504C ASC1P38011 319 aaKnown RBP-0.19□□□□□ -2.44
SPG3YDR504C AQR1P53943 586 aa-0.19□□□□□ -2.44
SPG3YDR504C MET17P06106 444 aa-0.2□□□□□ -2.44
SPG3YDR504C RPL12AP0CX53 165 aaKnown RBP-0.2□□□□□ -2.44
SPG3YDR504C RPL12BP0CX54 165 aa-0.2□□□□□ -2.44
SPG3YDR504C ARF1P11076 181 aaKnown RBP-0.2□□□□□ -2.44
SPG3YDR504C SLM5P25345 492 aaKnown RBP-0.2□□□□□ -2.44
SPG3YDR504C ACL4Q03771 387 aa-0.2□□□□□ -2.44
SPG3YDR504C DCP1Q12517 231 aaPredicted RBP-0.2□□□□□ -2.44
SPG3YDR504C YER188C-AP0C0V2 99 aa-0.21□□□□□ -2.44
SPG3YDR504C MRPL20P22354 195 aaPredicted RBP-0.21□□□□□ -2.44
SPG3YDR504C CAB3P36076 571 aa-0.21□□□□□ -2.44
SPG3YDR504C MOB2P43563 287 aa-0.21□□□□□ -2.44
SPG3YDR504C YFR018CP43599 363 aa-0.21□□□□□ -2.44
SPG3YDR504C PRP3Q03338 469 aaPredicted RBP-0.21□□□□□ -2.44
SPG3YDR504C SLM3Q12093 417 aa-0.21□□□□□ -2.44
SPG3YDR504C YOR012WQ12351 137 aa-0.21□□□□□ -2.44
SPG3YDR504C MTR10Q99189 972 aa-0.21□□□□□ -2.44
SPG3YDR504C VPS63O13549 108 aa-0.22□□□□□ -2.44
SPG3YDR504C ITR2P30606 609 aa-0.22□□□□□ -2.44
SPG3YDR504C MMS21P38632 267 aa-0.22□□□□□ -2.44
SPG3YDR504C ARF3P40994 183 aaRIP-Chip data-0.22□□□□□ -2.44not detected
SPG3YDR504C YJR146WP47174 117 aa-0.22□□□□□ -2.44
SPG3YDR504C YGL118CP53132 145 aa-0.22□□□□□ -2.44
SPG3YDR504C SUR7P54003 302 aa-0.22□□□□□ -2.44
SPG3YDR504C YLH47Q06493 454 aa-0.22□□□□□ -2.44
SPG3YDR504C SUE1Q06524 206 aa-0.22□□□□□ -2.44
SPG3YDR504C RPL26AP05743 127 aaKnown RBP-0.23□□□□□ -2.45
SPG3YDR504C TRX2P22803 104 aaKnown RBP-0.23□□□□□ -2.45
SPG3YDR504C PIR5P46999 287 aa-0.23□□□□□ -2.45
SPG3YDR504C RPL26BP53221 127 aaKnown RBP-0.23□□□□□ -2.45
SPG3YDR504C YNL040WP53960 456 aaPredicted RBP-0.23□□□□□ -2.45
SPG3YDR504C ERO1Q03103 563 aa-0.23□□□□□ -2.45
SPG3YDR504C EBS1Q03466 884 aaKnown RBP-0.23□□□□□ -2.45
SPG3YDR504C DON1Q05610 365 aa-0.23□□□□□ -2.45
SPG3YDR504C IMH1Q06704 911 aaKnown RBP-0.23□□□□□ -2.45
SPG3YDR504C BYE1P36106 594 aa-0.24□□□□□ -2.45
SPG3YDR504C OLA1P38219 394 aaKnown RBP-0.24□□□□□ -2.45
SPG3YDR504C HIT1P46973 164 aa-0.24□□□□□ -2.45
SPG3YDR504C TOM22P49334 152 aa-0.24□□□□□ -2.45
SPG3YDR504C FMP48P53233 369 aa-0.24□□□□□ -2.45
SPG3YDR504C RSC1P53236 928 aa-0.24□□□□□ -2.45
SPG3YDR504C URA10P30402 227 aa-0.25□□□□□ -2.45
SPG3YDR504C HSP104P31539 908 aaKnown RBP-0.25□□□□□ -2.45
SPG3YDR504C GRE3P38715 327 aaKnown RBP RIP-Chip data-0.25□□□□□ -2.45not detected
SPG3YDR504C DSE2P38844 325 aa-0.25□□□□□ -2.45
SPG3YDR504C LSG1P53145 640 aaKnown RBP-0.25□□□□□ -2.45
SPG3YDR504C TIM22Q12328 207 aa-0.25□□□□□ -2.45
SPG3YDR504C ISN1Q99312 450 aa-0.25□□□□□ -2.45
SPG3YDR504C CDC42P19073 191 aa-0.26□□□□□ -2.45
SPG3YDR504C CLB3P24870 427 aa-0.26□□□□□ -2.45
SPG3YDR504C SDS23P53172 527 aa-0.26□□□□□ -2.45
SPG3YDR504C RPT4P53549 437 aaKnown RBP-0.26□□□□□ -2.45
SPG3YDR504C TRM82Q03774 444 aa-0.26□□□□□ -2.45
SPG3YDR504C URC2Q04411 772 aa-0.26□□□□□ -2.45
SPG3YDR504C YOL163WP0CF20 169 aa-0.27□□□□□ -2.45
SPG3YDR504C YKL071WP36086 256 aa-0.27□□□□□ -2.45
SPG3YDR504C RFT1P38206 574 aaPredicted RBP-0.27□□□□□ -2.45
SPG3YDR504C UTP9P38882 575 aaKnown RBP-0.27□□□□□ -2.45
SPG3YDR504C LCB2P40970 561 aa-0.27□□□□□ -2.45
SPG3YDR504C MED2Q12124 431 aa-0.27□□□□□ -2.45
SPG3YDR504C RNA1P11745 407 aaKnown RBP-0.28□□□□□ -2.45
SPG3YDR504C PRE7P23724 241 aaKnown RBP-0.28□□□□□ -2.45
SPG3YDR504C QDR3P38227 689 aa-0.28□□□□□ -2.45
SPG3YDR504C RTC5Q12108 567 aaKnown RBP-0.28□□□□□ -2.45
SPG3YDR504C YPL150WQ12152 901 aa-0.28□□□□□ -2.45
SPG3YDR504C DAP2P18962 818 aa-0.29□□□□□ -2.46
SPG3YDR504C TRM7P38238 310 aaKnown RBP-0.29□□□□□ -2.46
SPG3YDR504C ACT1P60010 375 aaKnown RBP-0.29□□□□□ -2.46
SPG3YDR504C ALE1Q08548 619 aa-0.29□□□□□ -2.46
SPG3YDR504C RPN8Q08723 338 aaKnown RBP-0.29□□□□□ -2.46
SPG3YDR504C CKA1P15790 372 aa-0.3□□□□□ -2.46
SPG3YDR504C RIM1P32445 135 aaKnown RBP-0.3□□□□□ -2.46
SPG3YDR504C NRP1P32770 719 aaKnown RBP RIP-Chip data-0.3□□□□□ -2.46not detected
SPG3YDR504C CSE1P33307 960 aa-0.3□□□□□ -2.46
SPG3YDR504C SLM1P40485 686 aa-0.3□□□□□ -2.46
SPG3YDR504C RTS3P53289 263 aa-0.3□□□□□ -2.46
SPG3YDR504C YDR341CQ05506 607 aaKnown RBP-0.3□□□□□ -2.46
SPG3YDR504C NSE1Q07913 336 aa-0.3□□□□□ -2.46
SPG3YDR504C BOL1Q3E793 110 aa-0.3□□□□□ -2.46
SPG3YDR504C SMF2P38778 549 aa-0.31□□□□□ -2.46
SPG3YDR504C SER3P40054 469 aa-0.31□□□□□ -2.46
SPG3YDR504C AYR1P40471 297 aa-0.31□□□□□ -2.46
SPG3YDR504C ROY1Q04847 553 aa-0.31□□□□□ -2.46
SPG3YDR504C CYR1P08678 2026 aaKnown RBP-0.31□□□□□ -2.46
SPG3YDR504C YSC83P32792 385 aa-0.32□□□□□ -2.46
SPG3YDR504C ZTA1P38230 334 aaKnown RBP-0.32□□□□□ -2.46
SPG3YDR504C NUP49Q02199 472 aa-0.32□□□□□ -2.46
SPG3YDR504C TRM44Q02648 567 aaKnown RBP-0.32□□□□□ -2.46
SPG3YDR504C EMC6Q12431 108 aa-0.32□□□□□ -2.46
SPG3YDR504C RRT12P25381 491 aa-0.33□□□□□ -2.46
SPG3YDR504C YER135CP40082 130 aa-0.33□□□□□ -2.46
Retrieved 100 of 5,963 RNA–protein pairs in 19.1 ms