RNA–Protein interactions for RNA: YDR407C

TRS120, Transcript of Component of transport protein particle (TRAPP) complex II, yeastyeast

Gene TRS120, Length 3,870 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRS120YDR407C FHN1P53279 174 aa3.32□□□□□ -1.88
TRS120YDR407C CTL1Q03220 320 aaKnown RBP3.32□□□□□ -1.88
TRS120YDR407C SNX41Q04053 625 aa3.32□□□□□ -1.88
TRS120YDR407C RPN9Q04062 393 aaKnown RBP3.32□□□□□ -1.88
TRS120YDR407C SDO1Q07953 250 aaKnown RBP3.32□□□□□ -1.88
TRS120YDR407C REX4Q08237 289 aa3.32□□□□□ -1.88
TRS120YDR407C ERD1P16151 362 aa3.32□□□□□ -1.88
TRS120YDR407C RSC6P25632 483 aa3.32□□□□□ -1.88
TRS120YDR407C ATP11P32453 318 aa3.32□□□□□ -1.88
TRS120YDR407C RPC34P32910 317 aa3.32□□□□□ -1.88
TRS120YDR407C PRP18P33411 251 aaPredicted RBP3.32□□□□□ -1.88
TRS120YDR407C PXA2P34230 853 aa3.32□□□□□ -1.88
TRS120YDR407C MCM7P38132 845 aa3.32□□□□□ -1.88
TRS120YDR407C AIM46P38885 310 aa3.32□□□□□ -1.88
TRS120YDR407C CHL4P38907 458 aa3.32□□□□□ -1.88
TRS120YDR407C PHM8P40025 321 aa3.32□□□□□ -1.88
TRS120YDR407C LSG1P53145 640 aaKnown RBP3.32□□□□□ -1.88
TRS120YDR407C MTQ1P53944 314 aa3.32□□□□□ -1.88
TRS120YDR407C TDA1Q03533 586 aa3.32□□□□□ -1.88
TRS120YDR407C ARV1Q06541 321 aa3.32□□□□□ -1.88
TRS120YDR407C SYM1Q06563 197 aa3.32□□□□□ -1.88
TRS120YDR407C KGD2P19262 463 aaPredicted RBP3.31□□□□□ -1.88
TRS120YDR407C HOP1P20050 605 aa3.31□□□□□ -1.88
TRS120YDR407C RPL24BP24000 155 aaKnown RBP3.31□□□□□ -1.88
TRS120YDR407C SFP1P32432 683 aa3.31□□□□□ -1.88
TRS120YDR407C ROG1P53118 685 aa3.31□□□□□ -1.88
TRS120YDR407C LCL3P53153 274 aa3.31□□□□□ -1.88
TRS120YDR407C RTS3P53289 263 aa3.31□□□□□ -1.88
TRS120YDR407C SLI1P53304 468 aa3.31□□□□□ -1.88
TRS120YDR407C BUD17P53727 317 aa3.31□□□□□ -1.88
TRS120YDR407C IMP4P53941 290 aaKnown RBP3.31□□□□□ -1.88
TRS120YDR407C HHT1P61830 136 aa3.31□□□□□ -1.88
TRS120YDR407C MGR3Q04472 501 aa3.31□□□□□ -1.88
TRS120YDR407C RSC3Q06639 885 aa3.31□□□□□ -1.88
TRS120YDR407C YPR063CQ12160 140 aa3.31□□□□□ -1.88
TRS120YDR407C MET2P08465 486 aa3.31□□□□□ -1.88
TRS120YDR407C AGA2P32781 87 aa3.31□□□□□ -1.88
TRS120YDR407C TEF4P36008 412 aaKnown RBP3.31□□□□□ -1.88
TRS120YDR407C CBP4P37267 147 aa3.31□□□□□ -1.88
TRS120YDR407C LEU5P38702 357 aa3.31□□□□□ -1.88
TRS120YDR407C HRB1P38922 454 aaKnown RBP RIP-Chip data3.31□□□□□ -1.88not detected
TRS120YDR407C PZF1P39933 429 aa3.31□□□□□ -1.88
TRS120YDR407C DIE2P50076 525 aa3.31□□□□□ -1.88
TRS120YDR407C EMC4P53073 190 aa3.31□□□□□ -1.88
TRS120YDR407C GTF1P53260 183 aaPredicted RBP3.31□□□□□ -1.88
TRS120YDR407C YPL113CQ02961 396 aa3.31□□□□□ -1.88
TRS120YDR407C ODC1Q03028 310 aa3.31□□□□□ -1.88
TRS120YDR407C YLR224WQ05947 369 aa3.31□□□□□ -1.88
TRS120YDR407C TGS1Q12052 315 aa3.31□□□□□ -1.88
TRS120YDR407C YDR034W-BQ6Q5X2 51 aa3.31□□□□□ -1.88
TRS120YDR407C FLP1P03870 423 aa3.31□□□□□ -1.88
TRS120YDR407C DSF1P0CX08 502 aa3.31□□□□□ -1.88
TRS120YDR407C YNR073CP0CX09 502 aa3.31□□□□□ -1.88
TRS120YDR407C SNF6P18888 332 aa3.31□□□□□ -1.88
TRS120YDR407C PET127P32606 800 aa3.31□□□□□ -1.88
TRS120YDR407C INM1P38710 295 aa3.31□□□□□ -1.88
TRS120YDR407C YIL152WP40455 235 aa3.31□□□□□ -1.88
TRS120YDR407C LSM1P47017 172 aaKnown RBP3.31□□□□□ -1.88
TRS120YDR407C SYF2P53277 215 aaPredicted RBP3.31□□□□□ -1.88
TRS120YDR407C CAC2Q04199 468 aa3.31□□□□□ -1.88
TRS120YDR407C IPK1Q06667 281 aa3.31□□□□□ -1.88
TRS120YDR407C ATG31Q12421 196 aa3.31□□□□□ -1.88
TRS120YDR407C TIM9O74700 87 aa3.3□□□□□ -1.88
TRS120YDR407C KAR1P11927 433 aa3.3□□□□□ -1.88
TRS120YDR407C YCR061WP25639 631 aa3.3□□□□□ -1.88
TRS120YDR407C AHC2P25649 128 aa3.3□□□□□ -1.88
TRS120YDR407C FUN19P28003 413 aaPredicted RBP3.3□□□□□ -1.88
TRS120YDR407C FMT1P32785 401 aa3.3□□□□□ -1.88
TRS120YDR407C TCM62P38228 572 aaKnown RBP3.3□□□□□ -1.88
TRS120YDR407C BIG1P38813 335 aa3.3□□□□□ -1.88
TRS120YDR407C GIM4P40005 111 aaKnown RBP3.3□□□□□ -1.88
TRS120YDR407C APQ12P40532 138 aa3.3□□□□□ -1.88
TRS120YDR407C GLR1P41921 483 aaKnown RBP3.3□□□□□ -1.88
TRS120YDR407C LYS20P48570 428 aaKnown RBP3.3□□□□□ -1.88
TRS120YDR407C YGL101WP53144 215 aa3.3□□□□□ -1.88
TRS120YDR407C FDC1Q03034 503 aa3.3□□□□□ -1.88
TRS120YDR407C SWA2Q06677 668 aa3.3□□□□□ -1.88
TRS120YDR407C RRP40Q08285 240 aaKnown RBP3.3□□□□□ -1.88
TRS120YDR407C YDL109CQ12103 647 aa3.3□□□□□ -1.88
TRS120YDR407C LYS21Q12122 440 aaKnown RBP3.3□□□□□ -1.88
TRS120YDR407C RPB5P20434 215 aa3.3□□□□□ -1.88
TRS120YDR407C PEX1P24004 1043 aa3.3□□□□□ -1.88
TRS120YDR407C MCM10P32354 571 aa3.3□□□□□ -1.88
TRS120YDR407C FAA4P47912 694 aaKnown RBP3.3□□□□□ -1.88
TRS120YDR407C FMP48P53233 369 aa3.3□□□□□ -1.88
TRS120YDR407C YGR066CP53242 292 aa3.3□□□□□ -1.88
TRS120YDR407C PCP1P53259 346 aa3.3□□□□□ -1.88
TRS120YDR407C RRN9P53437 365 aa3.3□□□□□ -1.88
TRS120YDR407C DCS1Q06151 350 aa3.3□□□□□ -1.88
TRS120YDR407C SUS1Q6WNK7 96 aa3.3□□□□□ -1.88
TRS120YDR407C MATALPHA1P0CY06 175 aa3.3□□□□□ -1.88
TRS120YDR407C HMLALPHA1P0CY07 175 aa3.3□□□□□ -1.88
TRS120YDR407C ARF2P19146 181 aaKnown RBP3.3□□□□□ -1.88
TRS120YDR407C HOM6P31116 359 aaKnown RBP3.3□□□□□ -1.88
TRS120YDR407C MRPL36P36531 177 aa3.3□□□□□ -1.88
TRS120YDR407C PAU24P38155 120 aa3.3□□□□□ -1.88
TRS120YDR407C SDS24P38314 527 aa3.3□□□□□ -1.88
TRS120YDR407C HTD2P38790 280 aaKnown RBP3.3□□□□□ -1.88
TRS120YDR407C LAS21P40367 830 aa3.3□□□□□ -1.88
TRS120YDR407C YIL067CP40514 678 aa3.3□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 12.1 ms