RNA–Protein interactions for RNA: YDR120C

TRM1, Transcript of tRNA methyltransferase, yeastyeast

Gene TRM1, Length 1,713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM1YDR120C FDH1Q08911 376 aa3.61□□□□□ -1.83
TRM1YDR120C TEL1P38110 2787 aa3.6□□□□□ -1.83
TRM1YDR120C MYO1P08964 1928 aa3.6□□□□□ -1.83
TRM1YDR120C STE3P06783 470 aa3.6□□□□□ -1.83
TRM1YDR120C SKI2P35207 1287 aaKnown RBP RIP-Chip data3.6□□□□□ -1.83not detected
TRM1YDR120C YHK8P38776 514 aa3.6□□□□□ -1.83
TRM1YDR120C MPS2P53159 387 aa3.6□□□□□ -1.83
TRM1YDR120C YMR102CQ03177 834 aa3.6□□□□□ -1.83
TRM1YDR120C LOT6Q07923 191 aa3.6□□□□□ -1.83
TRM1YDR120C YGK3Q12222 375 aaPredicted RBP3.6□□□□□ -1.83
TRM1YDR120C TAL1P15019 335 aaKnown RBP3.59□□□□□ -1.83
TRM1YDR120C MAK31P23059 88 aa3.59□□□□□ -1.83
TRM1YDR120C MSK1P32048 576 aa3.59□□□□□ -1.83
TRM1YDR120C TIR2P33890 251 aa3.59□□□□□ -1.83
TRM1YDR120C GEP4P38812 185 aa3.59□□□□□ -1.83
TRM1YDR120C HMF1P40037 129 aaKnown RBP3.59□□□□□ -1.83
TRM1YDR120C TDA1Q03533 586 aa3.59□□□□□ -1.83
TRM1YDR120C SCW10Q04951 389 aa3.59□□□□□ -1.83
TRM1YDR120C SMC5Q08204 1093 aa3.59□□□□□ -1.83
TRM1YDR120C YOR012WQ12351 137 aa3.59□□□□□ -1.83
TRM1YDR120C YCR024C-BQ3E7Z8 88 aa3.59□□□□□ -1.83
TRM1YDR120C MOT1P32333 1867 aa3.59□□□□□ -1.83
TRM1YDR120C PIS1P06197 220 aaKnown RBP3.58□□□□□ -1.84
TRM1YDR120C DBR1P24309 405 aaKnown RBP3.58□□□□□ -1.84
TRM1YDR120C CSE2P33308 149 aa3.58□□□□□ -1.84
TRM1YDR120C AIM24P47127 394 aa3.58□□□□□ -1.84
TRM1YDR120C TRM112P53738 135 aaPredicted RBP3.58□□□□□ -1.84
TRM1YDR120C MYO5Q04439 1219 aaKnown RBP3.58□□□□□ -1.84
TRM1YDR120C PRM6Q04705 352 aa3.58□□□□□ -1.84
TRM1YDR120C RSA1Q08932 381 aa3.58□□□□□ -1.84
TRM1YDR120C EAF3Q12432 401 aa3.58□□□□□ -1.84
TRM1YDR120C FMP27Q06179 2628 aa3.58□□□□□ -1.84
TRM1YDR120C ADH2P00331 348 aaKnown RBP3.58□□□□□ -1.84
TRM1YDR120C NAM2P11325 894 aa3.58□□□□□ -1.84
TRM1YDR120C CLN3P13365 580 aa3.58□□□□□ -1.84
TRM1YDR120C THR4P16120 514 aaKnown RBP3.58□□□□□ -1.84
TRM1YDR120C SAG1P20840 650 aa3.58□□□□□ -1.84
TRM1YDR120C TRX1P22217 103 aaKnown RBP3.58□□□□□ -1.84
TRM1YDR120C TVP38P36164 337 aa3.58□□□□□ -1.84
TRM1YDR120C LYS12P40495 371 aaKnown RBP3.58□□□□□ -1.84
TRM1YDR120C MAM33P40513 266 aa3.58□□□□□ -1.84
TRM1YDR120C SNL1P40548 159 aa3.58□□□□□ -1.84
TRM1YDR120C SHE4P51534 789 aa3.58□□□□□ -1.84
TRM1YDR120C RTN1Q04947 295 aaKnown RBP3.58□□□□□ -1.84
TRM1YDR120C AIM45Q12480 344 aaKnown RBP3.58□□□□□ -1.84
TRM1YDR120C MSI1P13712 422 aa3.57□□□□□ -1.84
TRM1YDR120C MRPL8P22353 238 aa3.57□□□□□ -1.84
TRM1YDR120C DRE2P36152 348 aa3.57□□□□□ -1.84
TRM1YDR120C LCP5P40079 357 aaPredicted RBP3.57□□□□□ -1.84
TRM1YDR120C PRM1P53835 661 aa3.57□□□□□ -1.84
TRM1YDR120C NKP2Q06162 153 aa3.57□□□□□ -1.84
TRM1YDR120C RIF2Q06208 395 aa3.57□□□□□ -1.84
TRM1YDR120C IRC25Q07951 179 aa3.57□□□□□ -1.84
TRM1YDR120C RRG7Q08774 242 aaPredicted RBP3.57□□□□□ -1.84
TRM1YDR120C MAS1P10507 462 aa3.56□□□□□ -1.84
TRM1YDR120C RPB5P20434 215 aa3.56□□□□□ -1.84
TRM1YDR120C EFB1P32471 206 aaKnown RBP3.56□□□□□ -1.84
TRM1YDR120C RAD5P32849 1169 aaPredicted RBP3.56□□□□□ -1.84
TRM1YDR120C BUD2P33314 1104 aa3.56□□□□□ -1.84
TRM1YDR120C SWD3P38123 315 aa3.56□□□□□ -1.84
TRM1YDR120C MST27P53176 234 aa3.56□□□□□ -1.84
TRM1YDR120C ALF1P53904 254 aa3.56□□□□□ -1.84
TRM1YDR120C RRB1Q04225 511 aaKnown RBP3.56□□□□□ -1.84
TRM1YDR120C AIM33Q04516 312 aa3.56□□□□□ -1.84
TRM1YDR120C YOR338WQ99326 363 aa3.56□□□□□ -1.84
TRM1YDR120C RPS16AP0CX51 143 aaKnown RBP3.56□□□□□ -1.84
TRM1YDR120C RPS16BP0CX52 143 aaKnown RBP3.56□□□□□ -1.84
TRM1YDR120C GRR1P24814 1151 aa3.56□□□□□ -1.84
TRM1YDR120C RME1P32338 300 aaKnown RBP3.56□□□□□ -1.84
TRM1YDR120C VAM7P32912 316 aa3.56□□□□□ -1.84
TRM1YDR120C HAC1P41546 238 aa3.56□□□□□ -1.84
TRM1YDR120C SEC27P41811 889 aaKnown RBP3.56□□□□□ -1.84
TRM1YDR120C YMR310CQ04867 317 aaPredicted RBP3.56□□□□□ -1.84
TRM1YDR120C GAT3Q07928 141 aa3.56□□□□□ -1.84
TRM1YDR120C HRT3Q12347 344 aa3.56□□□□□ -1.84
TRM1YDR120C IZH2Q12442 317 aa3.56□□□□□ -1.84
TRM1YDR120C FSH3Q99369 266 aa3.56□□□□□ -1.84
TRM1YDR120C SEN1Q00416 2231 aaKnown RBP3.55□□□□□ -1.84
TRM1YDR120C ISY1P21374 235 aaPredicted RBP3.55□□□□□ -1.84
TRM1YDR120C HMX1P32339 317 aa3.55□□□□□ -1.84
TRM1YDR120C SLX1P38324 304 aa3.55□□□□□ -1.84
TRM1YDR120C POP2P39008 433 aa3.55□□□□□ -1.84
TRM1YDR120C YPR091CQ06833 770 aa3.55□□□□□ -1.84
TRM1YDR120C YDL114WQ07530 308 aa3.55□□□□□ -1.84
TRM1YDR120C JID1Q12350 301 aa3.55□□□□□ -1.84
TRM1YDR120C MEX67Q99257 599 aaKnown RBP3.55□□□□□ -1.84
TRM1YDR120C YHR122WP38829 231 aa3.54□□□□□ -1.84
TRM1YDR120C PTI1P39927 425 aaPredicted RBP3.54□□□□□ -1.84
TRM1YDR120C SEC9P40357 651 aa3.54□□□□□ -1.84
TRM1YDR120C YNL134CP53912 376 aaKnown RBP3.54□□□□□ -1.84
TRM1YDR120C ADA2Q02336 434 aa3.54□□□□□ -1.84
TRM1YDR120C SHS1Q07657 551 aa3.54□□□□□ -1.84
TRM1YDR120C PLP2Q12017 286 aa3.54□□□□□ -1.84
TRM1YDR120C FCY22Q12119 530 aa3.54□□□□□ -1.84
TRM1YDR120C PCL9Q12477 304 aa3.54□□□□□ -1.84
TRM1YDR120C HTZ1Q12692 134 aaKnown RBP3.54□□□□□ -1.84
TRM1YDR120C IRA2P19158 3079 aa3.54□□□□□ -1.84
TRM1YDR120C RIF1P29539 1916 aa3.53□□□□□ -1.84
TRM1YDR120C FKS1P38631 1876 aaKnown RBP3.53□□□□□ -1.84
TRM1YDR120C FUN26P31381 517 aa3.53□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 16.1 ms