RNA–Protein interactions for RNA: YDR080W

VPS41, Transcript of Subunit of the HOPS endocytic tethering complex, yeastyeast

Gene VPS41, Length 2,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS41YDR080W TPO5P36029 618 aa2.26□□□□□ -2.05
VPS41YDR080W PRS3P38689 320 aaKnown RBP2.26□□□□□ -2.05
VPS41YDR080W PAC11P40960 533 aa2.26□□□□□ -2.05
VPS41YDR080W CRN1Q06440 651 aa2.26□□□□□ -2.05
VPS41YDR080W YPR091CQ06833 770 aa2.26□□□□□ -2.05
VPS41YDR080W POS5Q06892 414 aa2.26□□□□□ -2.05
VPS41YDR080W HNT3Q08702 217 aa2.26□□□□□ -2.05
VPS41YDR080W RDR1Q08904 546 aa2.26□□□□□ -2.05
VPS41YDR080W GET4Q12125 312 aa2.26□□□□□ -2.05
VPS41YDR080W RUP1Q12242 671 aa2.26□□□□□ -2.05
VPS41YDR080W YPR011CQ12251 326 aa2.26□□□□□ -2.05
VPS41YDR080W PSY3Q12318 242 aa2.26□□□□□ -2.05
VPS41YDR080W RRP36Q12481 300 aaPredicted RBP2.26□□□□□ -2.05
VPS41YDR080W VCX1Q99385 411 aa2.26□□□□□ -2.05
VPS41YDR080W SPT3P06844 337 aa2.26□□□□□ -2.05
VPS41YDR080W GCY1P14065 312 aaKnown RBP RIP-Chip data2.26□□□□□ -2.05not detected
VPS41YDR080W RPS1AP33442 255 aaKnown RBP2.26□□□□□ -2.05
VPS41YDR080W RRN3P36070 627 aa2.26□□□□□ -2.05
VPS41YDR080W BNA4P38169 460 aa2.26□□□□□ -2.05
VPS41YDR080W MSG5P38590 489 aa2.26□□□□□ -2.05
VPS41YDR080W TRR2P38816 342 aa2.26□□□□□ -2.05
VPS41YDR080W FAA2P39518 744 aa2.26□□□□□ -2.05
VPS41YDR080W EFM4P40516 257 aa2.26□□□□□ -2.05
VPS41YDR080W RPL10P41805 221 aaKnown RBP2.26□□□□□ -2.05
VPS41YDR080W TIS11P47977 285 aa2.26□□□□□ -2.05
VPS41YDR080W GOT1Q03554 138 aa2.26□□□□□ -2.05
VPS41YDR080W COS7Q07788 383 aa2.26□□□□□ -2.05
VPS41YDR080W SRN2Q99176 213 aa2.26□□□□□ -2.05
VPS41YDR080W RAD1P06777 1100 aa2.25□□□□□ -2.05
VPS41YDR080W PRB1P09232 635 aa2.25□□□□□ -2.05
VPS41YDR080W MRP2P10663 115 aaPredicted RBP2.25□□□□□ -2.05
VPS41YDR080W SPS100P13130 326 aa2.25□□□□□ -2.05
VPS41YDR080W HNM1P19807 563 aa2.25□□□□□ -2.05
VPS41YDR080W URA7P28274 579 aaKnown RBP2.25□□□□□ -2.05
VPS41YDR080W MSN2P33748 704 aa2.25□□□□□ -2.05
VPS41YDR080W YHB1P39676 399 aaKnown RBP2.25□□□□□ -2.05
VPS41YDR080W TAF6P53040 516 aa2.25□□□□□ -2.05
VPS41YDR080W BUD32P53323 261 aa2.25□□□□□ -2.05
VPS41YDR080W EKI1Q03764 534 aa2.25□□□□□ -2.05
VPS41YDR080W YMR111CQ04461 462 aaPredicted RBP2.25□□□□□ -2.05
VPS41YDR080W YMR317WQ04893 1140 aa2.25□□□□□ -2.05
VPS41YDR080W YLR352WQ06479 807 aa2.25□□□□□ -2.05
VPS41YDR080W YPR147CQ06522 304 aaKnown RBP2.25□□□□□ -2.05
VPS41YDR080W GRE1Q08969 168 aa2.25□□□□□ -2.05
VPS41YDR080W YEF1P32622 495 aa2.25□□□□□ -2.05
VPS41YDR080W EFM1P38732 585 aa2.25□□□□□ -2.05
VPS41YDR080W RTT107P38850 1070 aa2.25□□□□□ -2.05
VPS41YDR080W CCT2P39076 527 aaKnown RBP2.25□□□□□ -2.05
VPS41YDR080W ECM10P39987 644 aa2.25□□□□□ -2.05
VPS41YDR080W AAD10P47182 288 aa2.25□□□□□ -2.05
VPS41YDR080W UBP8P50102 471 aa2.25□□□□□ -2.05
VPS41YDR080W ATP22P50273 684 aaPredicted RBP2.25□□□□□ -2.05
VPS41YDR080W ECI1Q05871 280 aa2.25□□□□□ -2.05
VPS41YDR080W BUR2Q05949 395 aa2.25□□□□□ -2.05
VPS41YDR080W YLL007CQ07799 665 aa2.25□□□□□ -2.05
VPS41YDR080W SLH1P53327 1967 aaKnown RBP2.25□□□□□ -2.05
VPS41YDR080W HEM2P05373 342 aa2.25□□□□□ -2.05
VPS41YDR080W HEM4P06174 275 aa2.25□□□□□ -2.05
VPS41YDR080W SUI3P09064 285 aaKnown RBP2.25□□□□□ -2.05
VPS41YDR080W YHR214C-DP0CX93 97 aa2.25□□□□□ -2.05
VPS41YDR080W CBS1P14066 229 aa2.25□□□□□ -2.05
VPS41YDR080W IDH2P28241 369 aaKnown RBP2.25□□□□□ -2.05
VPS41YDR080W IME2P32581 645 aa2.25□□□□□ -2.05
VPS41YDR080W YME1P32795 747 aa2.25□□□□□ -2.05
VPS41YDR080W UBC6P33296 250 aaPredicted RBP2.25□□□□□ -2.05
VPS41YDR080W VPS51P36116 164 aa2.25□□□□□ -2.05
VPS41YDR080W GRE3P38715 327 aaKnown RBP RIP-Chip data2.25□□□□□ -2.05not detected
VPS41YDR080W RHO5P53879 331 aaKnown RBP2.25□□□□□ -2.05
VPS41YDR080W IBD2P53892 351 aa2.25□□□□□ -2.05
VPS41YDR080W RSM28Q03430 361 aa2.25□□□□□ -2.05
VPS41YDR080W YDR249CQ03787 373 aa2.25□□□□□ -2.05
VPS41YDR080W SOV1Q04748 898 aa2.25□□□□□ -2.05
VPS41YDR080W RQC1Q05468 723 aaKnown RBP2.25□□□□□ -2.05
VPS41YDR080W YLR177WQ06251 628 aa2.25□□□□□ -2.05
VPS41YDR080W FMP40Q08968 688 aaPredicted RBP2.25□□□□□ -2.05
VPS41YDR080W YPL245WQ12179 454 aaKnown RBP2.25□□□□□ -2.05
VPS41YDR080W GEP5Q12393 293 aa2.25□□□□□ -2.05
VPS41YDR080W PRP46Q12417 451 aaPredicted RBP2.25□□□□□ -2.05
VPS41YDR080W DET1Q99288 334 aaKnown RBP2.25□□□□□ -2.05
VPS41YDR080W RPB2P08518 1224 aaKnown RBP2.24□□□□□ -2.05
VPS41YDR080W BAR1P12630 587 aa2.24□□□□□ -2.05
VPS41YDR080W PDA1P16387 420 aaKnown RBP2.24□□□□□ -2.05
VPS41YDR080W BMT2P38278 337 aa2.24□□□□□ -2.05
VPS41YDR080W YIL060WP40519 144 aa2.24□□□□□ -2.05
VPS41YDR080W KEL2P50090 882 aa2.24□□□□□ -2.05
VPS41YDR080W YGR066CP53242 292 aa2.24□□□□□ -2.05
VPS41YDR080W DCP2P53550 970 aaKnown RBP2.24□□□□□ -2.05
VPS41YDR080W GIS2P53849 153 aaKnown RBP RIP-Chip data2.24□□□□□ -2.05not detected
VPS41YDR080W IGO1P53897 168 aa2.24□□□□□ -2.05
VPS41YDR080W ADE13Q05911 482 aaKnown RBP2.24□□□□□ -2.05
VPS41YDR080W BSC1Q12140 328 aa2.24□□□□□ -2.05
VPS41YDR080W RIO1Q12196 484 aaKnown RBP2.24□□□□□ -2.05
VPS41YDR080W FAS1P07149 2051 aaKnown RBP2.24□□□□□ -2.05
VPS41YDR080W GCD2P12754 651 aaPredicted RBP2.24□□□□□ -2.05
VPS41YDR080W SPO16P17122 198 aa2.24□□□□□ -2.05
VPS41YDR080W TRX3P25372 127 aa2.24□□□□□ -2.05
VPS41YDR080W DBF20P32328 564 aa2.24□□□□□ -2.05
VPS41YDR080W LOS1P33418 1100 aaPredicted RBP2.24□□□□□ -2.05
VPS41YDR080W MRPS5P33759 307 aa2.24□□□□□ -2.05
VPS41YDR080W YKL102CP34249 101 aa2.24□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms