RNA–Protein interactions for RNA: YDL049C

KNH1, Transcript of Protein with similarity to Kre9p, yeast

Gene KNH1, Length 807 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
KNH1	YDL049C	STE50	P25344	346 aa		4.87	□□□□□ -1.63
KNH1	YDL049C	CTS1	P29029	562 aa		4.87	□□□□□ -1.63
KNH1	YDL049C	ARP2	P32381	391 aa	Known RBP	4.87	□□□□□ -1.63
KNH1	YDL049C	LOS1	P33418	1100 aa	Predicted RBP	4.87	□□□□□ -1.63
KNH1	YDL049C	MTR2	P34232	184 aa	Known RBP	4.87	□□□□□ -1.63
KNH1	YDL049C	LOT5	P34234	306 aa		4.87	□□□□□ -1.63
KNH1	YDL049C	TPO5	P36029	618 aa		4.87	□□□□□ -1.63
KNH1	YDL049C	TDP1	P38319	544 aa		4.87	□□□□□ -1.63
KNH1	YDL049C	HSM3	P38348	480 aa		4.87	□□□□□ -1.63
KNH1	YDL049C	STP2	P38704	541 aa		4.87	□□□□□ -1.63
KNH1	YDL049C	LIN1	P38852	340 aa	Predicted RBP	4.87	□□□□□ -1.63
KNH1	YDL049C	ZRG8	P40021	1076 aa		4.87	□□□□□ -1.63
KNH1	YDL049C	GTO1	P48239	356 aa		4.87	□□□□□ -1.63
KNH1	YDL049C	KEL2	P50090	882 aa		4.87	□□□□□ -1.63
KNH1	YDL049C	TAF4	P50105	388 aa		4.87	□□□□□ -1.63
KNH1	YDL049C	TAF6	P53040	516 aa		4.87	□□□□□ -1.63
KNH1	YDL049C	PEF1	P53238	335 aa		4.87	□□□□□ -1.63
KNH1	YDL049C	TLG1	Q03322	224 aa		4.87	□□□□□ -1.63
KNH1	YDL049C	TVP15	Q03860	143 aa		4.87	□□□□□ -1.63
KNH1	YDL049C	GMC2	Q06201	188 aa		4.87	□□□□□ -1.63
KNH1	YDL049C	RPN5	Q12250	445 aa	Known RBP	4.87	□□□□□ -1.63
KNH1	YDL049C	RPC40	P07703	335 aa	Known RBP	4.86	□□□□□ -1.63
KNH1	YDL049C	PBN1	P25580	416 aa		4.86	□□□□□ -1.63
KNH1	YDL049C	PUP2	P32379	260 aa		4.86	□□□□□ -1.63
KNH1	YDL049C	SEC17	P32602	292 aa		4.86	□□□□□ -1.63
KNH1	YDL049C	SCO2	P38072	301 aa		4.86	□□□□□ -1.63
KNH1	YDL049C	YBR032W	P38223	100 aa		4.86	□□□□□ -1.63
KNH1	YDL049C	BZZ1	P38822	633 aa		4.86	□□□□□ -1.63
KNH1	YDL049C	YHR177W	P38867	453 aa		4.86	□□□□□ -1.63
KNH1	YDL049C	AST2	P39945	430 aa	Known RBP	4.86	□□□□□ -1.63
KNH1	YDL049C	SSY5	P47002	699 aa		4.86	□□□□□ -1.63
KNH1	YDL049C	MKC7	P53379	596 aa		4.86	□□□□□ -1.63
KNH1	YDL049C	GOR1	P53839	350 aa		4.86	□□□□□ -1.63
KNH1	YDL049C	EOS1	P53938	366 aa		4.86	□□□□□ -1.63
KNH1	YDL049C	ERB1	Q04660	807 aa	Known RBP	4.86	□□□□□ -1.63
KNH1	YDL049C	STP4	Q07351	490 aa		4.86	□□□□□ -1.63
KNH1	YDL049C	RDR1	Q08904	546 aa		4.86	□□□□□ -1.63
KNH1	YDL049C	SLF1	Q12034	447 aa	Known RBP	4.86	□□□□□ -1.63
KNH1	YDL049C	BSC1	Q12140	328 aa		4.86	□□□□□ -1.63
KNH1	YDL049C	NCE102	Q12207	173 aa	RIP-Chip data	4.86	□□□□□ -1.63	not detected
KNH1	YDL049C	ATG34	Q12292	412 aa		4.86	□□□□□ -1.63
KNH1	YDL049C	URA3	P03962	267 aa		4.85	□□□□□ -1.63
KNH1	YDL049C	CDC36	P06100	191 aa	Predicted RBP	4.85	□□□□□ -1.63
KNH1	YDL049C	GPH1	P06738	902 aa	Known RBP	4.85	□□□□□ -1.63
KNH1	YDL049C	ADE5,7	P07244	802 aa	Known RBP	4.85	□□□□□ -1.63
KNH1	YDL049C	SUI3	P09064	285 aa	Known RBP	4.85	□□□□□ -1.63
KNH1	YDL049C	YHR214C-D	P0CX93	97 aa		4.85	□□□□□ -1.63
KNH1	YDL049C	CBS1	P14066	229 aa		4.85	□□□□□ -1.63
KNH1	YDL049C	YAP1	P19880	650 aa	Known RBP	4.85	□□□□□ -1.63
KNH1	YDL049C	RPI1	P23250	407 aa	Known RBP	4.85	□□□□□ -1.63
KNH1	YDL049C	MRP20	P32387	263 aa		4.85	□□□□□ -1.63
KNH1	YDL049C	SWH1	P35845	1188 aa		4.85	□□□□□ -1.63
KNH1	YDL049C	RSM22	P36056	628 aa		4.85	□□□□□ -1.63
KNH1	YDL049C	YGP1	P38616	354 aa	Known RBP	4.85	□□□□□ -1.63
KNH1	YDL049C	RRF1	P38771	230 aa		4.85	□□□□□ -1.63
KNH1	YDL049C	ANS1	P38832	159 aa		4.85	□□□□□ -1.63
KNH1	YDL049C	PTH1	P38876	190 aa	Known RBP	4.85	□□□□□ -1.63
KNH1	YDL049C	AYR1	P40471	297 aa		4.85	□□□□□ -1.63
KNH1	YDL049C	RPS12	P48589	143 aa	Known RBP	4.85	□□□□□ -1.63
KNH1	YDL049C	NCE101	Q02820	53 aa		4.85	□□□□□ -1.63
KNH1	YDL049C	VBA4	Q04602	768 aa	Known RBP	4.85	□□□□□ -1.63
KNH1	YDL049C	HRI1	Q05905	244 aa	Known RBP	4.85	□□□□□ -1.63
KNH1	YDL049C	NFI1	Q12216	726 aa		4.85	□□□□□ -1.63
KNH1	YDL049C	JLP1	Q12358	412 aa		4.85	□□□□□ -1.63
KNH1	YDL049C	SFG1	Q12507	346 aa		4.85	□□□□□ -1.63
KNH1	YDL049C	MRP13	P12686	339 aa		4.84	□□□□□ -1.63
KNH1	YDL049C	FRS1	P15624	595 aa	Known RBP	4.84	□□□□□ -1.63
KNH1	YDL049C	KGD1	P20967	1014 aa	Known RBP	4.84	□□□□□ -1.63
KNH1	YDL049C	YIM1	P28625	365 aa		4.84	□□□□□ -1.63
KNH1	YDL049C	YHR218W	P38899	603 aa		4.84	□□□□□ -1.63
KNH1	YDL049C	FAA2	P39518	744 aa		4.84	□□□□□ -1.63
KNH1	YDL049C	LYS12	P40495	371 aa	Known RBP	4.84	□□□□□ -1.63
KNH1	YDL049C	YNL010W	P53981	241 aa	Known RBP	4.84	□□□□□ -1.63
KNH1	YDL049C	ACS1	Q01574	713 aa		4.84	□□□□□ -1.63
KNH1	YDL049C	SDC1	Q03323	175 aa		4.84	□□□□□ -1.63
KNH1	YDL049C	SSY1	Q03770	852 aa		4.84	□□□□□ -1.63
KNH1	YDL049C	RAD30	Q04049	632 aa		4.84	□□□□□ -1.63
KNH1	YDL049C	API2	Q04413	109 aa		4.84	□□□□□ -1.63
KNH1	YDL049C	GLO2	Q05584	274 aa		4.84	□□□□□ -1.63
KNH1	YDL049C	FAR10	Q06001	478 aa		4.84	□□□□□ -1.63
KNH1	YDL049C	YLR345W	Q06137	509 aa		4.84	□□□□□ -1.63
KNH1	YDL049C	COS7	Q07788	383 aa		4.84	□□□□□ -1.63
KNH1	YDL049C	YEH2	Q07950	538 aa		4.84	□□□□□ -1.63
KNH1	YDL049C	UAF30	Q08747	228 aa		4.84	□□□□□ -1.63
KNH1	YDL049C	YKL018C-A	Q3E7A7	99 aa		4.84	□□□□□ -1.63
KNH1	YDL049C	CDC39	P25655	2108 aa	Known RBP	4.84	□□□□□ -1.64
KNH1	YDL049C	RAS2	P01120	322 aa	Known RBP	4.83	□□□□□ -1.64
KNH1	YDL049C	CBP6	P07253	162 aa	Predicted RBP	4.83	□□□□□ -1.64
KNH1	YDL049C	CTA1	P15202	515 aa		4.83	□□□□□ -1.64
KNH1	YDL049C	YCK1	P23291	538 aa		4.83	□□□□□ -1.64
KNH1	YDL049C	RAD51	P25454	400 aa		4.83	□□□□□ -1.64
KNH1	YDL049C	YEF1	P32622	495 aa		4.83	□□□□□ -1.64
KNH1	YDL049C	YOR062C	P36025	268 aa		4.83	□□□□□ -1.64
KNH1	YDL049C	FRE2	P36033	711 aa		4.83	□□□□□ -1.64
KNH1	YDL049C	MAL32	P38158	584 aa		4.83	□□□□□ -1.64
KNH1	YDL049C	PEX7	P39108	375 aa		4.83	□□□□□ -1.64
KNH1	YDL049C	SEN34	P39707	275 aa		4.83	□□□□□ -1.64
KNH1	YDL049C	PCL7	P40186	285 aa		4.83	□□□□□ -1.64
KNH1	YDL049C	REE1	P40893	198 aa		4.83	□□□□□ -1.64
KNH1	YDL049C	BUD8	P41698	603 aa		4.83	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 31.7 ms