RNA–Protein interactions for RNA: YDL020C

RPN4, Transcript of Transcription factor that stimulates expression of proteasome genes, yeastyeast

Gene RPN4, Length 1,596 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN4YDL020C PES4P39684 611 aa3.25□□□□□ -1.89
RPN4YDL020C TIS11P47977 285 aa3.25□□□□□ -1.89
RPN4YDL020C VPS20Q04272 221 aa3.25□□□□□ -1.89
RPN4YDL020C MYO4P32492 1471 aa3.24□□□□□ -1.89
RPN4YDL020C YPK9Q12697 1472 aa3.24□□□□□ -1.89
RPN4YDL020C PRB1P09232 635 aa3.24□□□□□ -1.89
RPN4YDL020C ZRC1P20107 442 aa3.24□□□□□ -1.89
RPN4YDL020C IML3P38265 245 aa3.24□□□□□ -1.89
RPN4YDL020C SSO2P39926 295 aa3.24□□□□□ -1.89
RPN4YDL020C BTT1P40314 149 aaPredicted RBP3.24□□□□□ -1.89
RPN4YDL020C YCH1P42937 148 aa3.24□□□□□ -1.89
RPN4YDL020C NAS6P50086 228 aa3.24□□□□□ -1.89
RPN4YDL020C VAC7P53950 1165 aa3.24□□□□□ -1.89
RPN4YDL020C ABZ2Q03266 374 aa3.24□□□□□ -1.89
RPN4YDL020C FSH2Q05015 223 aa3.24□□□□□ -1.89
RPN4YDL020C ATP16Q12165 160 aa3.24□□□□□ -1.89
RPN4YDL020C SFM1Q12314 213 aa3.24□□□□□ -1.89
RPN4YDL020C BPT1P14772 1559 aa3.24□□□□□ -1.89
RPN4YDL020C LDS1P31379 325 aa3.23□□□□□ -1.89
RPN4YDL020C DEP1P31385 405 aa3.23□□□□□ -1.89
RPN4YDL020C AIM20P40451 204 aa3.23□□□□□ -1.89
RPN4YDL020C YGL039WP53183 348 aaKnown RBP3.23□□□□□ -1.89
RPN4YDL020C PRP38Q00723 242 aaPredicted RBP3.23□□□□□ -1.89
RPN4YDL020C TRM82Q03774 444 aa3.23□□□□□ -1.89
RPN4YDL020C DNL4Q08387 944 aaPredicted RBP3.23□□□□□ -1.89
RPN4YDL020C SLM3Q12093 417 aa3.23□□□□□ -1.89
RPN4YDL020C MDY2Q12285 212 aa3.23□□□□□ -1.89
RPN4YDL020C SCC2Q04002 1493 aa3.23□□□□□ -1.89
RPN4YDL020C VPS63O13549 108 aa3.22□□□□□ -1.89
RPN4YDL020C CBP2P03874 630 aaPredicted RBP3.22□□□□□ -1.89
RPN4YDL020C STE7P06784 515 aa3.22□□□□□ -1.89
RPN4YDL020C MIR1P23641 311 aaKnown RBP3.22□□□□□ -1.89
RPN4YDL020C PCL1P24867 279 aa3.22□□□□□ -1.89
RPN4YDL020C ERG9P29704 444 aa3.22□□□□□ -1.89
RPN4YDL020C IES6P32617 166 aa3.22□□□□□ -1.89
RPN4YDL020C PCH2P38126 564 aa3.22□□□□□ -1.89
RPN4YDL020C LSG1P53145 640 aaKnown RBP3.22□□□□□ -1.89
RPN4YDL020C ENT5Q03769 411 aaKnown RBP3.22□□□□□ -1.89
RPN4YDL020C BUR2Q05949 395 aa3.22□□□□□ -1.89
RPN4YDL020C GAS2Q06135 555 aa3.22□□□□□ -1.89
RPN4YDL020C FRE8Q12209 686 aa3.22□□□□□ -1.89
RPN4YDL020C DNA2P38859 1522 aa3.22□□□□□ -1.89
RPN4YDL020C YOR1P53049 1477 aa3.22□□□□□ -1.89
RPN4YDL020C BUD4P47136 1447 aa3.22□□□□□ -1.89
RPN4YDL020C CMK2P22517 447 aa3.21□□□□□ -1.89
RPN4YDL020C PET18P25362 215 aa3.21□□□□□ -1.89
RPN4YDL020C PMT2P31382 759 aa3.21□□□□□ -1.89
RPN4YDL020C WSC4P38739 605 aa3.21□□□□□ -1.89
RPN4YDL020C YNL320WP42840 284 aa3.21□□□□□ -1.89
RPN4YDL020C HAL1Q01766 294 aa3.21□□□□□ -1.89
RPN4YDL020C YLR297WQ05899 129 aa3.21□□□□□ -1.89
RPN4YDL020C YLR177WQ06251 628 aa3.21□□□□□ -1.89
RPN4YDL020C HIF1Q12373 385 aa3.21□□□□□ -1.89
RPN4YDL020C APC2Q12440 853 aa3.21□□□□□ -1.89
RPN4YDL020C COX4P04037 155 aa3.21□□□□□ -1.9
RPN4YDL020C RPS14AP06367 137 aaKnown RBP3.21□□□□□ -1.9
RPN4YDL020C RPL18AP0CX49 186 aaKnown RBP3.21□□□□□ -1.9
RPN4YDL020C RPL18BP0CX50 186 aaKnown RBP3.21□□□□□ -1.9
RPN4YDL020C UNG1P12887 359 aa3.21□□□□□ -1.9
RPN4YDL020C DCC1P25559 380 aa3.21□□□□□ -1.9
RPN4YDL020C SOL2P37262 315 aa3.21□□□□□ -1.9
RPN4YDL020C RCK2P38623 610 aa3.21□□□□□ -1.9
RPN4YDL020C MMS21P38632 267 aa3.21□□□□□ -1.9
RPN4YDL020C END3P39013 349 aa3.21□□□□□ -1.9
RPN4YDL020C RPS14BP39516 138 aaKnown RBP3.21□□□□□ -1.9
RPN4YDL020C IGD1P43598 195 aa3.21□□□□□ -1.9
RPN4YDL020C AIM23P47015 356 aa3.21□□□□□ -1.9
RPN4YDL020C CAB5Q03941 241 aa3.21□□□□□ -1.9
RPN4YDL020C ATG2P53855 1592 aa3.2□□□□□ -1.9
RPN4YDL020C RKR1Q04781 1562 aa3.2□□□□□ -1.9
RPN4YDL020C VMA5P31412 392 aaKnown RBP3.2□□□□□ -1.9
RPN4YDL020C YPS1P32329 569 aa3.2□□□□□ -1.9
RPN4YDL020C COS9P36034 407 aa3.2□□□□□ -1.9
RPN4YDL020C UTH1P36135 365 aa3.2□□□□□ -1.9
RPN4YDL020C SWC5P38326 303 aa3.2□□□□□ -1.9
RPN4YDL020C YFR018CP43599 363 aa3.2□□□□□ -1.9
RPN4YDL020C SEH1P53011 349 aaKnown RBP3.2□□□□□ -1.9
RPN4YDL020C TAF6P53040 516 aa3.2□□□□□ -1.9
RPN4YDL020C SUR7P54003 302 aa3.2□□□□□ -1.9
RPN4YDL020C RVB1Q03940 463 aaKnown RBP3.2□□□□□ -1.9
RPN4YDL020C TSA2Q04120 196 aa3.2□□□□□ -1.9
RPN4YDL020C ALE1Q08548 619 aa3.2□□□□□ -1.9
RPN4YDL020C GCD2P12754 651 aaPredicted RBP3.19□□□□□ -1.9
RPN4YDL020C HSP26P15992 214 aaKnown RBP RIP-Chip data3.19□□□□□ -1.9not detected
RPN4YDL020C GPI18P38211 433 aa3.19□□□□□ -1.9
RPN4YDL020C BMT2P38278 337 aa3.19□□□□□ -1.9
RPN4YDL020C MOB2P43563 287 aa3.19□□□□□ -1.9
RPN4YDL020C YGR168CP53293 376 aa3.19□□□□□ -1.9
RPN4YDL020C PXR1P53335 271 aaPredicted RBP3.19□□□□□ -1.9
RPN4YDL020C SLT2Q00772 484 aa3.19□□□□□ -1.9
RPN4YDL020C ADD37Q03233 198 aa3.19□□□□□ -1.9
RPN4YDL020C RPN6Q12377 434 aa3.19□□□□□ -1.9
RPN4YDL020C SMC4Q12267 1418 aa3.19□□□□□ -1.9
RPN4YDL020C TOA1P32773 286 aa3.18□□□□□ -1.9
RPN4YDL020C RRF1P38771 230 aa3.18□□□□□ -1.9
RPN4YDL020C ALD5P40047 520 aaKnown RBP3.18□□□□□ -1.9
RPN4YDL020C BIO3P50277 480 aa3.18□□□□□ -1.9
RPN4YDL020C CDH1P53197 566 aa3.18□□□□□ -1.9
RPN4YDL020C CUR1Q06469 252 aa3.18□□□□□ -1.9
RPN4YDL020C DDC1Q08949 612 aa3.18□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 40.2 ms