RNA–Protein interactions for RNA: YBR217W

ATG12, Transcript of Ubiquitin-like modifier involved in autophagy and the Cvt pathway, yeast

Gene ATG12, Length 561 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATG12	YBR217W	YEL068C	P39977	110 aa		5.23	□□□□□ -1.57
ATG12	YBR217W	GCN20	P43535	752 aa	Known RBP	5.23	□□□□□ -1.57
ATG12	YBR217W	MNN5	P46982	586 aa		5.23	□□□□□ -1.57
ATG12	YBR217W	NIT2	P47016	307 aa		5.23	□□□□□ -1.57
ATG12	YBR217W	GPI8	P49018	411 aa		5.23	□□□□□ -1.57
ATG12	YBR217W	NUP42	P49686	430 aa	Known RBP	5.23	□□□□□ -1.57
ATG12	YBR217W	HSV2	P50079	448 aa	Predicted RBP	5.23	□□□□□ -1.57
ATG12	YBR217W	LYS5	P50113	272 aa		5.23	□□□□□ -1.57
ATG12	YBR217W	ERP6	P53198	216 aa		5.23	□□□□□ -1.57
ATG12	YBR217W	YGR066C	P53242	292 aa		5.23	□□□□□ -1.57
ATG12	YBR217W	ASI2	P53895	289 aa		5.23	□□□□□ -1.57
ATG12	YBR217W	YKR011C	Q02209	353 aa		5.23	□□□□□ -1.57
ATG12	YBR217W	HFD1	Q04458	532 aa		5.23	□□□□□ -1.57
ATG12	YBR217W	GAS2	Q06135	555 aa		5.23	□□□□□ -1.57
ATG12	YBR217W	AVO1	Q08236	1176 aa		5.23	□□□□□ -1.57
ATG12	YBR217W	BTS1	Q12051	335 aa		5.23	□□□□□ -1.57
ATG12	YBR217W	YDL109C	Q12103	647 aa		5.23	□□□□□ -1.57
ATG12	YBR217W	YLR126C	Q12288	251 aa		5.23	□□□□□ -1.57
ATG12	YBR217W	DET1	Q99288	334 aa	Known RBP	5.23	□□□□□ -1.57
ATG12	YBR217W	RPC40	P07703	335 aa	Known RBP	5.22	□□□□□ -1.57
ATG12	YBR217W	STE12	P13574	688 aa		5.22	□□□□□ -1.57
ATG12	YBR217W	YAK1	P14680	807 aa		5.22	□□□□□ -1.57
ATG12	YBR217W	RHB1	P25378	209 aa		5.22	□□□□□ -1.57
ATG12	YBR217W	HSP30	P25619	332 aa		5.22	□□□□□ -1.57
ATG12	YBR217W	EHD3	P28817	500 aa		5.22	□□□□□ -1.57
ATG12	YBR217W	TIM12	P32830	109 aa		5.22	□□□□□ -1.57
ATG12	YBR217W	HCS1	P34243	683 aa		5.22	□□□□□ -1.57
ATG12	YBR217W	SKN7	P38889	622 aa		5.22	□□□□□ -1.57
ATG12	YBR217W	VHR1	P40522	640 aa		5.22	□□□□□ -1.57
ATG12	YBR217W	HXT9	P40885	567 aa		5.22	□□□□□ -1.57
ATG12	YBR217W	RBG2	P53295	368 aa	Known RBP	5.22	□□□□□ -1.57
ATG12	YBR217W	HXT11	P54862	567 aa		5.22	□□□□□ -1.57
ATG12	YBR217W	NDL1	Q06568	189 aa		5.22	□□□□□ -1.57
ATG12	YBR217W	DTD1	Q07648	150 aa	Known RBP	5.22	□□□□□ -1.57
ATG12	YBR217W	HNT3	Q08702	217 aa		5.22	□□□□□ -1.57
ATG12	YBR217W	RDL2	Q08742	149 aa	Known RBP	5.22	□□□□□ -1.57
ATG12	YBR217W	HER1	Q12276	1246 aa		5.22	□□□□□ -1.57
ATG12	YBR217W	YOL162W	P0CF19	215 aa		5.21	□□□□□ -1.58
ATG12	YBR217W	YPK2	P18961	677 aa		5.21	□□□□□ -1.58
ATG12	YBR217W	MDH2	P22133	377 aa		5.21	□□□□□ -1.58
ATG12	YBR217W	SCO1	P23833	295 aa		5.21	□□□□□ -1.58
ATG12	YBR217W	YEF1	P32622	495 aa		5.21	□□□□□ -1.58
ATG12	YBR217W	ECM15	P35195	104 aa		5.21	□□□□□ -1.58
ATG12	YBR217W	PEX18	P38855	283 aa		5.21	□□□□□ -1.58
ATG12	YBR217W	CTF8	P38877	133 aa		5.21	□□□□□ -1.58
ATG12	YBR217W	YIL166C	P40445	542 aa		5.21	□□□□□ -1.58
ATG12	YBR217W	AGP3	P43548	558 aa		5.21	□□□□□ -1.58
ATG12	YBR217W	FMP33	P46998	180 aa		5.21	□□□□□ -1.58
ATG12	YBR217W	BNA3	P47039	444 aa	Known RBP	5.21	□□□□□ -1.58
ATG12	YBR217W	BAT2	P47176	376 aa	Known RBP	5.21	□□□□□ -1.58
ATG12	YBR217W	PRM8	P53174	237 aa		5.21	□□□□□ -1.58
ATG12	YBR217W	YNR040W	P53736	256 aa		5.21	□□□□□ -1.58
ATG12	YBR217W	PLB2	Q03674	706 aa		5.21	□□□□□ -1.58
ATG12	YBR217W	YDR239C	Q03780	787 aa		5.21	□□□□□ -1.58
ATG12	YBR217W	HMO1	Q03973	246 aa	Known RBP	5.21	□□□□□ -1.58
ATG12	YBR217W	SYO1	Q07395	620 aa		5.21	□□□□□ -1.58
ATG12	YBR217W	NTG2	Q08214	380 aa		5.21	□□□□□ -1.58
ATG12	YBR217W	WTM2	Q12206	467 aa		5.21	□□□□□ -1.58
ATG12	YBR217W	NFI1	Q12216	726 aa		5.21	□□□□□ -1.58
ATG12	YBR217W	COX17	Q12287	69 aa		5.21	□□□□□ -1.58
ATG12	YBR217W	SFG1	Q12507	346 aa		5.21	□□□□□ -1.58
ATG12	YBR217W	YPR015C	Q12531	247 aa		5.21	□□□□□ -1.58
ATG12	YBR217W	CBP6	P07253	162 aa	Predicted RBP	5.2	□□□□□ -1.58
ATG12	YBR217W	PDX1	P16451	410 aa		5.2	□□□□□ -1.58
ATG12	YBR217W	RPB8	P20436	146 aa		5.2	□□□□□ -1.58
ATG12	YBR217W	MAK32	P23060	363 aa		5.2	□□□□□ -1.58
ATG12	YBR217W	SNC1	P31109	117 aa		5.2	□□□□□ -1.58
ATG12	YBR217W	APE2	P32454	952 aa	Known RBP	5.2	□□□□□ -1.58
ATG12	YBR217W	PEP12	P32854	288 aa		5.2	□□□□□ -1.58
ATG12	YBR217W	AST1	P35183	429 aa		5.2	□□□□□ -1.58
ATG12	YBR217W	MDJ1	P35191	511 aa		5.2	□□□□□ -1.58
ATG12	YBR217W	CHS7	P38843	316 aa		5.2	□□□□□ -1.58
ATG12	YBR217W	YAR028W	P39548	234 aa		5.2	□□□□□ -1.58
ATG12	YBR217W	COG3	P40094	801 aa		5.2	□□□□□ -1.58
ATG12	YBR217W	MID1	P41821	548 aa		5.2	□□□□□ -1.58
ATG12	YBR217W	IRC7	P43623	340 aa		5.2	□□□□□ -1.58
ATG12	YBR217W	HMS2	P47175	358 aa		5.2	□□□□□ -1.58
ATG12	YBR217W	YGR168C	P53293	376 aa		5.2	□□□□□ -1.58
ATG12	YBR217W	OGG1	P53397	376 aa	Predicted RBP	5.2	□□□□□ -1.58
ATG12	YBR217W	SNF12	P53628	566 aa		5.2	□□□□□ -1.58
ATG12	YBR217W	YNR062C	P53748	327 aa		5.2	□□□□□ -1.58
ATG12	YBR217W	YPL039W	Q03080	316 aa		5.2	□□□□□ -1.58
ATG12	YBR217W	VIK1	Q12045	647 aa		5.2	□□□□□ -1.58
ATG12	YBR217W	YAL064W-B	O13512	126 aa		5.19	□□□□□ -1.58
ATG12	YBR217W	SSA3	P09435	649 aa	Known RBP	5.19	□□□□□ -1.58
ATG12	YBR217W	AIM17	P23180	465 aa	Known RBP	5.19	□□□□□ -1.58
ATG12	YBR217W	RRP7	P25368	297 aa	Predicted RBP	5.19	□□□□□ -1.58
ATG12	YBR217W	SBA1	P28707	216 aa	Known RBP	5.19	□□□□□ -1.58
ATG12	YBR217W	PTP2	P29461	750 aa		5.19	□□□□□ -1.58
ATG12	YBR217W	ASF2	P32448	525 aa	Predicted RBP	5.19	□□□□□ -1.58
ATG12	YBR217W	KRE6	P32486	720 aa		5.19	□□□□□ -1.58
ATG12	YBR217W	SLC1	P33333	303 aa		5.19	□□□□□ -1.58
ATG12	YBR217W	COS9	P36034	407 aa		5.19	□□□□□ -1.58
ATG12	YBR217W	JEN1	P36035	616 aa		5.19	□□□□□ -1.58
ATG12	YBR217W	SLM4	P38247	162 aa		5.19	□□□□□ -1.58
ATG12	YBR217W	RPP1	P38786	293 aa		5.19	□□□□□ -1.58
ATG12	YBR217W	ALP1	P38971	573 aa		5.19	□□□□□ -1.58
ATG12	YBR217W	SPO73	P40031	143 aa		5.19	□□□□□ -1.58
ATG12	YBR217W	RFC4	P40339	323 aa	Known RBP	5.19	□□□□□ -1.58
ATG12	YBR217W	XBP1	P40489	647 aa		5.19	□□□□□ -1.58

Retrieved 100 of 5,963 RNA–protein pairs in 26.5 ms