RNA–Protein interactions for RNA: YBR127C

VMA2, Transcript of Subunit B of V1 peripheral membrane domain of vacuolar H+-ATPase, yeastyeast

Gene VMA2, Length 1,554 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA2YBR127C MSL5Q12186 476 aaKnown RBP RIP-Chip data6.11□□□□□ -1.43not detected
VMA2YBR127C YDL085C-AQ3E7B7 68 aaKnown RBP6.11□□□□□ -1.43
VMA2YBR127C FRT1Q99332 602 aa6.11□□□□□ -1.43
VMA2YBR127C HXK2P04807 486 aaKnown RBP6.1□□□□□ -1.43
VMA2YBR127C CDC7P06243 507 aa6.1□□□□□ -1.43
VMA2YBR127C CBP1P07252 654 aa6.1□□□□□ -1.43
VMA2YBR127C NAM2P11325 894 aa6.1□□□□□ -1.43
VMA2YBR127C NHP6BP11633 99 aaKnown RBP6.1□□□□□ -1.43
VMA2YBR127C BUB2P26448 306 aaPredicted RBP6.1□□□□□ -1.43
VMA2YBR127C YEF1P32622 495 aa6.1□□□□□ -1.43
VMA2YBR127C CLB6P32943 380 aa6.1□□□□□ -1.43
VMA2YBR127C TGL1P34163 548 aa6.1□□□□□ -1.43
VMA2YBR127C GMH1P36125 273 aa6.1□□□□□ -1.43
VMA2YBR127C GCV1P48015 400 aa6.1□□□□□ -1.43
VMA2YBR127C ASN2P49090 572 aaKnown RBP6.1□□□□□ -1.43
VMA2YBR127C MPC1P53157 130 aaKnown RBP6.1□□□□□ -1.43
VMA2YBR127C KXD1P53158 218 aa6.1□□□□□ -1.43
VMA2YBR127C YGR017WP53210 297 aa6.1□□□□□ -1.43
VMA2YBR127C YGR151CP53287 111 aa6.1□□□□□ -1.43
VMA2YBR127C SLD5Q03406 294 aa6.1□□□□□ -1.43
VMA2YBR127C YMR155WQ03795 547 aa6.1□□□□□ -1.43
VMA2YBR127C PPN1Q04119 674 aa6.1□□□□□ -1.43
VMA2YBR127C YML096WQ04489 525 aa6.1□□□□□ -1.43
VMA2YBR127C CDC123Q05791 360 aa6.1□□□□□ -1.43
VMA2YBR127C YLR271WQ06152 274 aa6.1□□□□□ -1.43
VMA2YBR127C THI13Q07748 340 aa6.1□□□□□ -1.43
VMA2YBR127C LEU9Q12166 604 aaKnown RBP6.1□□□□□ -1.43
VMA2YBR127C SUS1Q6WNK7 96 aa6.1□□□□□ -1.43
VMA2YBR127C PET20Q99373 253 aa6.1□□□□□ -1.43
VMA2YBR127C HRP1Q99383 534 aaKnown RBP6.1□□□□□ -1.43
VMA2YBR127C RIF1P29539 1916 aa6.1□□□□□ -1.43
VMA2YBR127C SUC2P00724 532 aa6.1□□□□□ -1.43
VMA2YBR127C CDC36P06100 191 aaPredicted RBP6.1□□□□□ -1.43
VMA2YBR127C ADH3P07246 375 aaKnown RBP6.1□□□□□ -1.43
VMA2YBR127C ARG8P18544 423 aa6.1□□□□□ -1.43
VMA2YBR127C PET18P25362 215 aa6.1□□□□□ -1.43
VMA2YBR127C EHD3P28817 500 aa6.1□□□□□ -1.43
VMA2YBR127C YUH1P35127 236 aa6.1□□□□□ -1.43
VMA2YBR127C FIG1P38224 298 aa6.1□□□□□ -1.43
VMA2YBR127C YAR028WP39548 234 aa6.1□□□□□ -1.43
VMA2YBR127C YER188WP40103 239 aa6.1□□□□□ -1.43
VMA2YBR127C MGS1P40151 587 aa6.1□□□□□ -1.43
VMA2YBR127C CAK1P43568 368 aaPredicted RBP6.1□□□□□ -1.43
VMA2YBR127C NET1P47035 1189 aa6.1□□□□□ -1.43
VMA2YBR127C ASN1P49089 572 aaKnown RBP6.1□□□□□ -1.43
VMA2YBR127C LCL3P53153 274 aa6.1□□□□□ -1.43
VMA2YBR127C GUP1P53154 560 aa6.1□□□□□ -1.43
VMA2YBR127C COG7P53195 279 aa6.1□□□□□ -1.43
VMA2YBR127C NQM1P53228 333 aaPredicted RBP6.1□□□□□ -1.43
VMA2YBR127C BUD20Q08004 166 aaPredicted RBP6.1□□□□□ -1.43
VMA2YBR127C REX4Q08237 289 aa6.1□□□□□ -1.43
VMA2YBR127C GPM2Q12008 311 aa6.1□□□□□ -1.43
VMA2YBR127C SRO7Q12038 1033 aa6.1□□□□□ -1.43
VMA2YBR127C EAF3Q12432 401 aa6.1□□□□□ -1.43
VMA2YBR127C YMR030W-AQ3E760 96 aa6.1□□□□□ -1.43
VMA2YBR127C PDX1P16451 410 aa6.09□□□□□ -1.43
VMA2YBR127C MDH1P17505 334 aaKnown RBP RIP-Chip data6.09□□□□□ -1.43not detected
VMA2YBR127C AIM17P23180 465 aaKnown RBP6.09□□□□□ -1.43
VMA2YBR127C KIN82P25341 720 aa6.09□□□□□ -1.43
VMA2YBR127C YCR061WP25639 631 aa6.09□□□□□ -1.43
VMA2YBR127C CYS3P31373 394 aaKnown RBP6.09□□□□□ -1.43
VMA2YBR127C SDH3P33421 198 aa6.09□□□□□ -1.43
VMA2YBR127C DOA1P36037 715 aa6.09□□□□□ -1.43
VMA2YBR127C YBR220CP38318 560 aa6.09□□□□□ -1.43
VMA2YBR127C PFS1P38872 237 aa6.09□□□□□ -1.43
VMA2YBR127C AIM46P38885 310 aa6.09□□□□□ -1.43
VMA2YBR127C VPS45P38932 577 aa6.09□□□□□ -1.43
VMA2YBR127C GAT2P40209 560 aa6.09□□□□□ -1.43
VMA2YBR127C ARG2P40360 574 aa6.09□□□□□ -1.43
VMA2YBR127C NNF1P47149 201 aa6.09□□□□□ -1.43
VMA2YBR127C PHO23P50947 330 aa6.09□□□□□ -1.43
VMA2YBR127C YDC1Q02896 317 aa6.09□□□□□ -1.43
VMA2YBR127C MRP51Q02950 344 aa6.09□□□□□ -1.43
VMA2YBR127C GAS3Q03655 524 aa6.09□□□□□ -1.43
VMA2YBR127C YAP6Q03935 383 aa6.09□□□□□ -1.43
VMA2YBR127C GSF2Q04697 403 aaKnown RBP6.09□□□□□ -1.43
VMA2YBR127C YLR179CQ06252 201 aaKnown RBP6.09□□□□□ -1.43
VMA2YBR127C FDH1Q08911 376 aa6.09□□□□□ -1.43
VMA2YBR127C RGT2Q12300 763 aa6.09□□□□□ -1.43
VMA2YBR127C MRX4Q12467 430 aa6.09□□□□□ -1.43
VMA2YBR127C RMD5Q12508 421 aa6.09□□□□□ -1.43
VMA2YBR127C CDC33P07260 213 aaKnown RBP6.08□□□□□ -1.44
VMA2YBR127C NHP6AP11632 93 aaKnown RBP6.08□□□□□ -1.44
VMA2YBR127C GCY1P14065 312 aaKnown RBP RIP-Chip data6.08□□□□□ -1.44not detected
VMA2YBR127C CDC34P14682 295 aa6.08□□□□□ -1.44
VMA2YBR127C EPT1P22140 391 aa6.08□□□□□ -1.44
VMA2YBR127C AFT1P22149 690 aa6.08□□□□□ -1.44
VMA2YBR127C PUP3P25451 205 aaKnown RBP6.08□□□□□ -1.44
VMA2YBR127C PER1P25625 357 aa6.08□□□□□ -1.44
VMA2YBR127C SUA7P29055 345 aaPredicted RBP6.08□□□□□ -1.44
VMA2YBR127C ARP2P32381 391 aaKnown RBP6.08□□□□□ -1.44
VMA2YBR127C SNC2P33328 115 aa6.08□□□□□ -1.44
VMA2YBR127C FLR1P38124 548 aa6.08□□□□□ -1.44
VMA2YBR127C CHS7P38843 316 aa6.08□□□□□ -1.44
VMA2YBR127C MDM31P38880 579 aa6.08□□□□□ -1.44
VMA2YBR127C XDJ1P39102 459 aa6.08□□□□□ -1.44
VMA2YBR127C HPA3P39979 161 aa6.08□□□□□ -1.44
VMA2YBR127C GIP2P40036 548 aa6.08□□□□□ -1.44
VMA2YBR127C COG3P40094 801 aa6.08□□□□□ -1.44
VMA2YBR127C MET28P40573 187 aa6.08□□□□□ -1.44
Retrieved 100 of 5,963 RNA–protein pairs in 78.3 ms