RNA–Protein interactions for RNA: ENST00000636861.1

CHD2-225, Transcript of chromodomain helicase DNA binding protein 2, human

TSL 5

Gene CHD2, Length 146 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD2-225	ENST00000636861	SSX2IP	Q9Y2D8	614 aa		4.36	□□□□□ -1.71
CHD2-225	ENST00000636861	LEMD3	Q9Y2U8	911 aa		4.36	□□□□□ -1.71
CHD2-225	ENST00000636861	ATP6V0A2	Q9Y487	856 aa		4.36	□□□□□ -1.71
CHD2-225	ENST00000636861	NFE2L3	Q9Y4A8	694 aa		4.36	□□□□□ -1.71
CHD2-225	ENST00000636861	RBM8A	Q9Y5S9	174 aa	Known RBP	4.36	□□□□□ -1.71
CHD2-225	ENST00000636861	OTOF	Q9HC10	1997 aa		4.36	□□□□□ -1.71
CHD2-225	ENST00000636861	CACNA1F	O60840	1977 aa		4.35	□□□□□ -1.71
CHD2-225	ENST00000636861	FAM237A	A0A1B0GTK4	181 aa		4.35	□□□□□ -1.71
CHD2-225	ENST00000636861	PRAMEF22	A3QJZ6	481 aa		4.35	□□□□□ -1.71
CHD2-225	ENST00000636861	MANSC4	A6NHS7	340 aa	Predicted RBP	4.35	□□□□□ -1.71
CHD2-225	ENST00000636861	SPECC1L-ADORA2A	F8WAN1	911 aa		4.35	□□□□□ -1.71
CHD2-225	ENST00000636861	DNM1L	O00429	736 aa		4.35	□□□□□ -1.71
CHD2-225	ENST00000636861	OPLAH	O14841	1288 aa		4.35	□□□□□ -1.71
CHD2-225	ENST00000636861	SLC27A2	O14975	620 aa		4.35	□□□□□ -1.71
CHD2-225	ENST00000636861	ATP9B	O43861	1147 aa		4.35	□□□□□ -1.71
CHD2-225	ENST00000636861	RAD21	O60216	631 aa		4.35	□□□□□ -1.71
CHD2-225	ENST00000636861	MGEA5	O60502	916 aa		4.35	□□□□□ -1.71
CHD2-225	ENST00000636861	ZBED4	O75132	1171 aa		4.35	□□□□□ -1.71
CHD2-225	ENST00000636861	NDUFA10	O95299	355 aa		4.35	□□□□□ -1.71
CHD2-225	ENST00000636861	PARN	O95453	639 aa	Known RBP	4.35	□□□□□ -1.71
CHD2-225	ENST00000636861	CCDC159	P0C7I6	412 aa		4.35	□□□□□ -1.71
CHD2-225	ENST00000636861	ATP1A3	P13637	1013 aa		4.35	□□□□□ -1.71
CHD2-225	ENST00000636861	PFKFB1	P16118	471 aa		4.35	□□□□□ -1.71
CHD2-225	ENST00000636861	ZNF18	P17022	549 aa		4.35	□□□□□ -1.71
CHD2-225	ENST00000636861	GSTT1	P30711	240 aa		4.35	□□□□□ -1.71
CHD2-225	ENST00000636861	STAT6	P42226	847 aa		4.35	□□□□□ -1.71
CHD2-225	ENST00000636861	SCNN1B	P51168	640 aa		4.35	□□□□□ -1.71
CHD2-225	ENST00000636861	NDUFA8	P51970	172 aa		4.35	□□□□□ -1.71
CHD2-225	ENST00000636861	MTTP	P55157	894 aa		4.35	□□□□□ -1.71
CHD2-225	ENST00000636861	ADK	P55263	362 aa	Known RBP	4.35	□□□□□ -1.71
CHD2-225	ENST00000636861	HDAC4	P56524	1084 aa		4.35	□□□□□ -1.71
CHD2-225	ENST00000636861	COPS2	P61201	443 aa		4.35	□□□□□ -1.71
CHD2-225	ENST00000636861	RPL26	P61254	145 aa	Known RBP	4.35	□□□□□ -1.71
CHD2-225	ENST00000636861	USP4	Q13107	963 aa		4.35	□□□□□ -1.71
CHD2-225	ENST00000636861	ADAM9	Q13443	819 aa		4.35	□□□□□ -1.71
CHD2-225	ENST00000636861	NR1I3	Q14994	352 aa		4.35	□□□□□ -1.71
CHD2-225	ENST00000636861	NECTIN1	Q15223	517 aa		4.35	□□□□□ -1.71
CHD2-225	ENST00000636861	RCN1	Q15293	331 aa		4.35	□□□□□ -1.71
CHD2-225	ENST00000636861	SPA17	Q15506	151 aa		4.35	□□□□□ -1.71
CHD2-225	ENST00000636861	CLUL1	Q15846	466 aa		4.35	□□□□□ -1.71
CHD2-225	ENST00000636861	CCDC6	Q16204	474 aa		4.35	□□□□□ -1.71
CHD2-225	ENST00000636861	CNGA3	Q16281	694 aa		4.35	□□□□□ -1.71
CHD2-225	ENST00000636861	CFAP221	Q4G0U5	840 aa		4.35	□□□□□ -1.71
CHD2-225	ENST00000636861	PDCD4	Q53EL6	469 aa	Known RBP	4.35	□□□□□ -1.71
CHD2-225	ENST00000636861	SPDYA	Q5MJ70	313 aa		4.35	□□□□□ -1.71
CHD2-225	ENST00000636861	CCDC122	Q5T0U0	273 aa		4.35	□□□□□ -1.71
CHD2-225	ENST00000636861	DAB2IP	Q5VWQ8	1189 aa		4.35	□□□□□ -1.71
CHD2-225	ENST00000636861	ARMC3	Q5W041	872 aa		4.35	□□□□□ -1.71
CHD2-225	ENST00000636861	PHLDB3	Q6NSJ2	640 aa		4.35	□□□□□ -1.71
CHD2-225	ENST00000636861	C16orf87	Q6PH81	154 aa		4.35	□□□□□ -1.71
CHD2-225	ENST00000636861	SLC4A10	Q6U841	1118 aa		4.35	□□□□□ -1.71
CHD2-225	ENST00000636861	PI16	Q6UXB8	463 aa		4.35	□□□□□ -1.71
CHD2-225	ENST00000636861	INTS8	Q75QN2	995 aa	Known RBP	4.35	□□□□□ -1.71
CHD2-225	ENST00000636861	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	4.35	□□□□□ -1.71
CHD2-225	ENST00000636861	TBC1D1	Q86TI0	1168 aa	Predicted RBP	4.35	□□□□□ -1.71
CHD2-225	ENST00000636861	SPATA24	Q86W54	205 aa		4.35	□□□□□ -1.71
CHD2-225	ENST00000636861	ANKRD13B	Q86YJ7	626 aa		4.35	□□□□□ -1.71
CHD2-225	ENST00000636861	MAP7D3	Q8IWC1	876 aa		4.35	□□□□□ -1.71
CHD2-225	ENST00000636861	ARHGAP24	Q8N264	748 aa		4.35	□□□□□ -1.71
CHD2-225	ENST00000636861	CLASRP	Q8N2M8	674 aa	Known RBP	4.35	□□□□□ -1.71
CHD2-225	ENST00000636861	ENDOV	Q8N8Q3	282 aa	Known RBP	4.35	□□□□□ -1.71
CHD2-225	ENST00000636861	NECAB1	Q8N987	351 aa		4.35	□□□□□ -1.71
CHD2-225	ENST00000636861	SCAI	Q8N9R8	606 aa		4.35	□□□□□ -1.71
CHD2-225	ENST00000636861	LINC00301	Q8NCQ3	95 aa		4.35	□□□□□ -1.71
CHD2-225	ENST00000636861	PHC3	Q8NDX5	983 aa		4.35	□□□□□ -1.71
CHD2-225	ENST00000636861	STK32A	Q8WU08	396 aa		4.35	□□□□□ -1.71
CHD2-225	ENST00000636861	INPP5D	Q92835	1189 aa		4.35	□□□□□ -1.71
CHD2-225	ENST00000636861	CASP10	Q92851	521 aa		4.35	□□□□□ -1.71
CHD2-225	ENST00000636861	MAP4K1	Q92918	833 aa		4.35	□□□□□ -1.71
CHD2-225	ENST00000636861	DHRS1	Q96LJ7	313 aa		4.35	□□□□□ -1.71
CHD2-225	ENST00000636861	NEK1	Q96PY6	1258 aa		4.35	□□□□□ -1.71
CHD2-225	ENST00000636861	USP28	Q96RU2	1077 aa		4.35	□□□□□ -1.71
CHD2-225	ENST00000636861	HAPLN3	Q96S86	360 aa		4.35	□□□□□ -1.71
CHD2-225	ENST00000636861	MMS19	Q96T76	1030 aa		4.35	□□□□□ -1.71
CHD2-225	ENST00000636861	NUP88	Q99567	741 aa	Predicted RBP	4.35	□□□□□ -1.71
CHD2-225	ENST00000636861	MEIS3	Q99687	375 aa		4.35	□□□□□ -1.71
CHD2-225	ENST00000636861	MTR	Q99707	1265 aa		4.35	□□□□□ -1.71
CHD2-225	ENST00000636861	CORO1B	Q9BR76	489 aa		4.35	□□□□□ -1.71
CHD2-225	ENST00000636861	FAM167B	Q9BTA0	163 aa		4.35	□□□□□ -1.71
CHD2-225	ENST00000636861	MTA3	Q9BTC8	594 aa		4.35	□□□□□ -1.71
CHD2-225	ENST00000636861	FTO	Q9C0B1	505 aa	Known RBP eCLIP	4.35	□□□□□ -1.71
CHD2-225	ENST00000636861	CCDC134	Q9H6E4	229 aa		4.35	□□□□□ -1.71
CHD2-225	ENST00000636861	DCLRE1B	Q9H816	532 aa		4.35	□□□□□ -1.71
CHD2-225	ENST00000636861	JADE2	Q9NQC1	790 aa		4.35	□□□□□ -1.71
CHD2-225	ENST00000636861	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	4.35	□□□□□ -1.71
CHD2-225	ENST00000636861	CYP39A1	Q9NYL5	469 aa		4.35	□□□□□ -1.71
CHD2-225	ENST00000636861	PTTG2	Q9NZH5	202 aa		4.35	□□□□□ -1.71
CHD2-225	ENST00000636861	DLGAP2	Q9P1A6	1054 aa		4.35	□□□□□ -1.71
CHD2-225	ENST00000636861	SRRD	Q9UH36	339 aa		4.35	□□□□□ -1.71
CHD2-225	ENST00000636861	SLC12A6	Q9UHW9	1150 aa		4.35	□□□□□ -1.71
CHD2-225	ENST00000636861	PPP1R9A	Q9ULJ8	1098 aa		4.35	□□□□□ -1.71
CHD2-225	ENST00000636861	SNX12	Q9UMY4	172 aa		4.35	□□□□□ -1.71
CHD2-225	ENST00000636861	PCDHA7	Q9UN72	937 aa		4.35	□□□□□ -1.71
CHD2-225	ENST00000636861	CARD8	Q9Y2G2	431 aa		4.35	□□□□□ -1.71
CHD2-225	ENST00000636861	L3MBTL1	Q9Y468	752 aa		4.35	□□□□□ -1.71
CHD2-225	ENST00000636861	USH1C	Q9Y6N9	552 aa		4.35	□□□□□ -1.71
CHD2-225	ENST00000636861	NCAPD2	Q15021	1401 aa		4.35	□□□□□ -1.71
CHD2-225	ENST00000636861	CREBBP	Q92793	2442 aa		4.35	□□□□□ -1.71
CHD2-225	ENST00000636861	AKAP13	Q12802	2813 aa		4.34	□□□□□ -1.71
CHD2-225	ENST00000636861	ARHGAP10	A1A4S6	786 aa		4.34	□□□□□ -1.71

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