RNA–Protein interactions for RNA: ENST00000616390.1

CACNA1C-231, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2 BASIC

Gene CACNA1C, Length 2,833 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-231ENST00000616390 HS2ST1Q7LGA3 356 aa15.13■□□□□ 0.01
CACNA1C-231ENST00000616390 ZNF720Q7Z2F6 126 aa15.13■□□□□ 0.01
CACNA1C-231ENST00000616390 ZNF341Q9BYN7 854 aa15.13■□□□□ 0.01
CACNA1C-231ENST00000616390 PLCB1Q9NQ66 1216 aa15.13■□□□□ 0.01
CACNA1C-231ENST00000616390 FRMD4BQ9Y2L6 1034 aa15.13■□□□□ 0.01
CACNA1C-231ENST00000616390 EVI5O60447 810 aa15.12■□□□□ 0.01
CACNA1C-231ENST00000616390 HIP1RO75146 1068 aa15.12■□□□□ 0.01
CACNA1C-231ENST00000616390 ALAS1P13196 640 aa15.12■□□□□ 0.01
CACNA1C-231ENST00000616390 GAP43P17677 238 aa15.12■□□□□ 0.01
CACNA1C-231ENST00000616390 DAAM2Q86T65 1068 aa15.12■□□□□ 0.01
CACNA1C-231ENST00000616390 SUPT20HQ8NEM7 779 aa15.12■□□□□ 0.01
CACNA1C-231ENST00000616390 IL31RAQ8NI17 732 aa15.12■□□□□ 0.01
CACNA1C-231ENST00000616390 SLC5A5Q92911 643 aa15.12■□□□□ 0.01
CACNA1C-231ENST00000616390 NACC1Q96RE7 527 aa15.12■□□□□ 0.01
CACNA1C-231ENST00000616390 RUFY1Q96T51 708 aa15.12■□□□□ 0.01
CACNA1C-231ENST00000616390 TEKT3Q9BXF9 490 aa15.12■□□□□ 0.01
CACNA1C-231ENST00000616390 OLFML3Q9NRN5 406 aa15.12■□□□□ 0.01
CACNA1C-231ENST00000616390 TSKSQ9UJT2 592 aa15.12■□□□□ 0.01
CACNA1C-231ENST00000616390 DNAJC12Q9UKB3 198 aa15.12■□□□□ 0.01
CACNA1C-231ENST00000616390 PCDHGC5Q9Y5F6 944 aa15.12■□□□□ 0.01
CACNA1C-231ENST00000616390 STK24Q9Y6E0 443 aa15.12■□□□□ 0.01
CACNA1C-231ENST00000616390 GOLGA6CA6NDK9 693 aa15.12■□□□□ 0.01
CACNA1C-231ENST00000616390 SLC26A4O43511 780 aa15.12■□□□□ 0.01
CACNA1C-231ENST00000616390 FLOT1O75955 427 aa15.12■□□□□ 0.01
CACNA1C-231ENST00000616390 VIL1P09327 827 aaKnown RBP15.12■□□□□ 0.01
CACNA1C-231ENST00000616390 GOLGA6DP0CG33 693 aa15.12■□□□□ 0.01
CACNA1C-231ENST00000616390 AARSP49588 968 aaKnown RBP eCLIP15.12■□□□□ 0.01
CACNA1C-231ENST00000616390 PPP2R5CQ13362 524 aa15.12■□□□□ 0.01
CACNA1C-231ENST00000616390 KCTD16Q68DU8 428 aa15.12■□□□□ 0.01
CACNA1C-231ENST00000616390 RANBP17Q9H2T7 1088 aaKnown RBP15.12■□□□□ 0.01
CACNA1C-231ENST00000616390 GOLGA6AQ9NYA3 693 aa15.12■□□□□ 0.01
CACNA1C-231ENST00000616390 CNTNAP1P78357 1384 aa15.12■□□□□ 0.01
CACNA1C-231ENST00000616390 K7ENM7 598 aa15.12■□□□□ 0.01
CACNA1C-231ENST00000616390 ITGB5P18084 799 aa15.12■□□□□ 0.01
CACNA1C-231ENST00000616390 STAT1P42224 750 aa15.12■□□□□ 0.01
CACNA1C-231ENST00000616390 FMO5P49326 533 aa15.12■□□□□ 0.01
CACNA1C-231ENST00000616390 DRAP1Q14919 205 aaPredicted RBP15.12■□□□□ 0.01
CACNA1C-231ENST00000616390 ARHGAP27Q6ZUM4 889 aa15.12■□□□□ 0.01
CACNA1C-231ENST00000616390 MIER3Q7Z3K6 550 aa15.12■□□□□ 0.01
CACNA1C-231ENST00000616390 ADAT2Q7Z6V5 191 aaKnown RBP15.12■□□□□ 0.01
CACNA1C-231ENST00000616390 VPS36Q86VN1 386 aa15.12■□□□□ 0.01
CACNA1C-231ENST00000616390 ITFG2Q969R8 447 aa15.12■□□□□ 0.01
CACNA1C-231ENST00000616390 OSGEPQ9NPF4 335 aa15.12■□□□□ 0.01
CACNA1C-231ENST00000616390 PSD3Q9NYI0 1048 aa15.12■□□□□ 0.01
CACNA1C-231ENST00000616390 COL20A1Q9P218 1284 aa15.12■□□□□ 0.01
CACNA1C-231ENST00000616390 DDX3XO00571 662 aaKnown RBP eCLIP15.11■□□□□ 0.01
CACNA1C-231ENST00000616390 H2AFZP0C0S5 128 aa15.11■□□□□ 0.01
CACNA1C-231ENST00000616390 HMGB2P26583 209 aaKnown RBP15.11■□□□□ 0.01
CACNA1C-231ENST00000616390 EPHB4P54760 987 aa15.11■□□□□ 0.01
CACNA1C-231ENST00000616390 HLTFQ14527 1009 aaKnown RBP eCLIP15.11■□□□□ 0.01
CACNA1C-231ENST00000616390 SLC15A2Q16348 729 aa15.11■□□□□ 0.01
CACNA1C-231ENST00000616390 BMT2Q1RMZ1 405 aa15.11■□□□□ 0.01
CACNA1C-231ENST00000616390 H2AFVQ71UI9 128 aa15.11■□□□□ 0.01
CACNA1C-231ENST00000616390 PEX26Q7Z412 305 aa15.11■□□□□ 0.01
CACNA1C-231ENST00000616390 IFT20Q8IY31 132 aa15.11■□□□□ 0.01
CACNA1C-231ENST00000616390 MSL3Q8N5Y2 521 aaKnown RBP15.11■□□□□ 0.01
CACNA1C-231ENST00000616390 AGPAT3Q9NRZ7 376 aa15.11■□□□□ 0.01
CACNA1C-231ENST00000616390 ATAD5Q96QE3 1844 aa15.11■□□□□ 0.01
CACNA1C-231ENST00000616390 ANKRD65E5RJM6 399 aa15.11■□□□□ 0.01
CACNA1C-231ENST00000616390 RAD51CO43502 376 aa15.11■□□□□ 0.01
CACNA1C-231ENST00000616390 MYCLP12524 364 aaPredicted RBP15.11■□□□□ 0.01
CACNA1C-231ENST00000616390 CAP2P40123 477 aa15.11■□□□□ 0.01
CACNA1C-231ENST00000616390 USP8P40818 1118 aa15.11■□□□□ 0.01
CACNA1C-231ENST00000616390 DLG4P78352 724 aa15.11■□□□□ 0.01
CACNA1C-231ENST00000616390 NAA35Q5VZE5 725 aa15.11■□□□□ 0.01
CACNA1C-231ENST00000616390 ZNF572Q7Z3I7 529 aaPredicted RBP15.11■□□□□ 0.01
CACNA1C-231ENST00000616390 TTLL6Q8N841 843 aa15.11■□□□□ 0.01
CACNA1C-231ENST00000616390 ZSWIM2Q8NEG5 633 aa15.11■□□□□ 0.01
CACNA1C-231ENST00000616390 GOLGA5Q8TBA6 731 aa15.11■□□□□ 0.01
CACNA1C-231ENST00000616390 CCDC43Q96MW1 224 aaKnown RBP15.11■□□□□ 0.01
CACNA1C-231ENST00000616390 TSPAN18Q96SJ8 248 aa15.11■□□□□ 0.01
CACNA1C-231ENST00000616390 EHMT1Q9H9B1 1298 aa15.11■□□□□ 0.01
CACNA1C-231ENST00000616390 RAVER2Q9HCJ3 691 aaKnown RBP15.11■□□□□ 0.01
CACNA1C-231ENST00000616390 KCNH7Q9NS40 1196 aa15.11■□□□□ 0.01
CACNA1C-231ENST00000616390 RSPH14Q9UHP6 348 aa15.11■□□□□ 0.01
CACNA1C-231ENST00000616390 BZW2Q9Y6E2 419 aaKnown RBP15.11■□□□□ 0.01
CACNA1C-231ENST00000616390 SLC16A3O15427 465 aaKnown RBP15.1■□□□□ 0.01
CACNA1C-231ENST00000616390 KIF4AO95239 1232 aa15.1■□□□□ 0.01
CACNA1C-231ENST00000616390 KRT14P02533 472 aa15.1■□□□□ 0.01
CACNA1C-231ENST00000616390 EIF2AK2P19525 551 aaKnown RBP15.1■□□□□ 0.01
CACNA1C-231ENST00000616390 ITIH3Q06033 890 aa15.1■□□□□ 0.01
CACNA1C-231ENST00000616390 PRPF4BQ13523 1007 aaKnown RBP15.1■□□□□ 0.01
CACNA1C-231ENST00000616390 PADI6Q6TGC4 694 aa15.1■□□□□ 0.01
CACNA1C-231ENST00000616390 DDX42Q86XP3 938 aaKnown RBP eCLIP15.1■□□□□ 0.01
CACNA1C-231ENST00000616390 FIZ1Q96SL8 496 aa15.1■□□□□ 0.01
CACNA1C-231ENST00000616390 HSF2BPO75031 334 aa15.1■□□□□ 0.01
CACNA1C-231ENST00000616390 GALCP54803 685 aa15.1■□□□□ 0.01
CACNA1C-231ENST00000616390 SPDYE2Q495Y8 402 aa15.1■□□□□ 0.01
CACNA1C-231ENST00000616390 USP38Q8NB14 1042 aa15.1■□□□□ 0.01
CACNA1C-231ENST00000616390 FAM76AQ8TAV0 307 aa15.1■□□□□ 0.01
CACNA1C-231ENST00000616390 LNX1Q8TBB1 728 aaPredicted RBP15.1■□□□□ 0.01
CACNA1C-231ENST00000616390 CASKIN2Q8WXE0 1202 aa15.1■□□□□ 0.01
CACNA1C-231ENST00000616390 ELMO3Q96BJ8 720 aa15.1■□□□□ 0.01
CACNA1C-231ENST00000616390 ARL8AQ96BM9 186 aa15.1■□□□□ 0.01
CACNA1C-231ENST00000616390 DDX47Q9H0S4 455 aaKnown RBP15.1■□□□□ 0.01
CACNA1C-231ENST00000616390 CHORDC1Q9UHD1 332 aaPredicted RBP15.1■□□□□ 0.01
CACNA1C-231ENST00000616390 ZNF646O15015 1829 aaPredicted RBP15.09■□□□□ 0.01
CACNA1C-231ENST00000616390 SORBS3O60504 671 aa15.09■□□□□ 0.01
CACNA1C-231ENST00000616390 GTF2A1P52655 376 aaPredicted RBP15.09■□□□□ 0.01
CACNA1C-231ENST00000616390 JAM2P57087 298 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms