RNA–Protein interactions for RNA: ENST00000592839.6

SF3A2-207, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 2

Gene SF3A2, Length 724 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-207ENST00000592839 BTBD18B2RXH4 712 aa16.68■□□□□ 0.26
SF3A2-207ENST00000592839 COL9A1P20849 921 aa16.68■□□□□ 0.26
SF3A2-207ENST00000592839 NLRP11P59045 1033 aaKnown RBP16.68■□□□□ 0.26
SF3A2-207ENST00000592839 GPM6BQ13491 265 aa16.68■□□□□ 0.26
SF3A2-207ENST00000592839 BTG3Q14201 252 aaPredicted RBP16.68■□□□□ 0.26
SF3A2-207ENST00000592839 TMEM266Q2M3C6 531 aa16.68■□□□□ 0.26
SF3A2-207ENST00000592839 LRRC71Q8N4P6 559 aa16.68■□□□□ 0.26
SF3A2-207ENST00000592839 HLA-CQ95604 372 aa16.68■□□□□ 0.26
SF3A2-207ENST00000592839 ADAM2Q99965 735 aa16.68■□□□□ 0.26
SF3A2-207ENST00000592839 HSD17B14Q9BPX1 270 aa16.68■□□□□ 0.26
SF3A2-207ENST00000592839 CYP26B1Q9NR63 512 aa16.68■□□□□ 0.26
SF3A2-207ENST00000592839 WRAP73Q9P2S5 460 aaPredicted RBP16.68■□□□□ 0.26
SF3A2-207ENST00000592839 MTUS1Q9ULD2 1270 aa16.68■□□□□ 0.26
SF3A2-207ENST00000592839 NFX1Q12986 1120 aaKnown RBP16.67■□□□□ 0.26
SF3A2-207ENST00000592839 DRP2Q13474 957 aa16.67■□□□□ 0.26
SF3A2-207ENST00000592839 FBXO18Q8NFZ0 1043 aa16.67■□□□□ 0.26
SF3A2-207ENST00000592839 FOXP1Q9H334 677 aaPredicted RBP16.67■□□□□ 0.26
SF3A2-207ENST00000592839 CHST12Q9NRB3 414 aa16.67■□□□□ 0.26
SF3A2-207ENST00000592839 SEPT9Q9UHD8 586 aaPredicted RBP16.67■□□□□ 0.26
SF3A2-207ENST00000592839 AKT3Q9Y243 479 aa16.67■□□□□ 0.26
SF3A2-207ENST00000592839 MRPL42Q9Y6G3 142 aaKnown RBP16.67■□□□□ 0.26
SF3A2-207ENST00000592839 A0A0U1RQF3 1178 aa16.66■□□□□ 0.26
SF3A2-207ENST00000592839 HOXA2O43364 376 aa16.66■□□□□ 0.26
SF3A2-207ENST00000592839 NCK2O43639 380 aa16.66■□□□□ 0.26
SF3A2-207ENST00000592839 CTNNB1P35222 781 aa16.66■□□□□ 0.26
SF3A2-207ENST00000592839 RFC5P40937 340 aa16.66■□□□□ 0.26
SF3A2-207ENST00000592839 TFF2Q03403 129 aa16.66■□□□□ 0.26
SF3A2-207ENST00000592839 UBE3AQ05086 875 aa16.66■□□□□ 0.26
SF3A2-207ENST00000592839 CAMK1Q14012 370 aa16.66■□□□□ 0.26
SF3A2-207ENST00000592839 ZNF598Q86UK7 904 aaKnown RBP16.66■□□□□ 0.26
SF3A2-207ENST00000592839 BANK1Q8NDB2 785 aa16.66■□□□□ 0.26
SF3A2-207ENST00000592839 LXNQ9BS40 222 aa16.66■□□□□ 0.26
SF3A2-207ENST00000592839 NSUN3Q9H649 340 aaKnown RBP16.66■□□□□ 0.26
SF3A2-207ENST00000592839 ZSWIM4Q9H7M6 989 aa16.66■□□□□ 0.26
SF3A2-207ENST00000592839 PLXNA4Q9HCM2 1894 aa16.65■□□□□ 0.26
SF3A2-207ENST00000592839 DENND3A2RUS2 1198 aa16.65■□□□□ 0.26
SF3A2-207ENST00000592839 WNT7AO00755 349 aa16.65■□□□□ 0.26
SF3A2-207ENST00000592839 NEMFO60524 1076 aa16.65■□□□□ 0.26
SF3A2-207ENST00000592839 SLITRK3O94933 977 aa16.65■□□□□ 0.26
SF3A2-207ENST00000592839 BAG4O95429 457 aaKnown RBP16.65■□□□□ 0.26
SF3A2-207ENST00000592839 TRAPPC10P48553 1259 aa16.65■□□□□ 0.26
SF3A2-207ENST00000592839 DNM2P50570 870 aa16.65■□□□□ 0.26
SF3A2-207ENST00000592839 POU5F1BQ06416 359 aa16.65■□□□□ 0.26
SF3A2-207ENST00000592839 TRIM29Q14134 588 aa16.65■□□□□ 0.26
SF3A2-207ENST00000592839 RABEP1Q15276 862 aa16.65■□□□□ 0.26
SF3A2-207ENST00000592839 PCBP1Q15365 356 aaKnown RBP eCLIP16.65■□□□□ 0.26
SF3A2-207ENST00000592839 CSPP1Q1MSJ5 1256 aa16.65■□□□□ 0.26
SF3A2-207ENST00000592839 CTC1Q2NKJ3 1217 aa16.65■□□□□ 0.26
SF3A2-207ENST00000592839 LEXMQ3ZCV2 418 aa16.65■□□□□ 0.26
SF3A2-207ENST00000592839 MTERF2Q49AM1 385 aa16.65■□□□□ 0.26
SF3A2-207ENST00000592839 IFNLR1Q8IU57 520 aaPredicted RBP16.65■□□□□ 0.26
SF3A2-207ENST00000592839 INO80BQ9C086 356 aaPredicted RBP16.65■□□□□ 0.26
SF3A2-207ENST00000592839 UBE2ZQ9H832 354 aaPredicted RBP16.65■□□□□ 0.26
SF3A2-207ENST00000592839 IFT122Q9HBG6 1241 aa16.65■□□□□ 0.26
SF3A2-207ENST00000592839 RNF19AQ9NV58 838 aa16.65■□□□□ 0.26
SF3A2-207ENST00000592839 PCDHA12Q9UN75 941 aa16.65■□□□□ 0.26
SF3A2-207ENST00000592839 PLAGL2Q9UPG8 496 aa16.65■□□□□ 0.26
SF3A2-207ENST00000592839 GINS2Q9Y248 185 aa16.65■□□□□ 0.26
SF3A2-207ENST00000592839 PCDHB7Q9Y5E2 793 aa16.65■□□□□ 0.26
SF3A2-207ENST00000592839 TMEM150BA6NC51 233 aa16.64■□□□□ 0.25
SF3A2-207ENST00000592839 EOMESO95936 686 aa16.64■□□□□ 0.25
SF3A2-207ENST00000592839 XRCC6P12956 609 aaKnown RBP eCLIP16.64■□□□□ 0.25
SF3A2-207ENST00000592839 YWHABP31946 246 aaKnown RBP16.64■□□□□ 0.25
SF3A2-207ENST00000592839 CALCRLQ16602 461 aa16.64■□□□□ 0.25
SF3A2-207ENST00000592839 SLC7A3Q8WY07 619 aa16.64■□□□□ 0.25
SF3A2-207ENST00000592839 PABPC5Q96DU9 382 aaKnown RBP16.64■□□□□ 0.25
SF3A2-207ENST00000592839 GCOM2Q9BZD3 368 aaPredicted RBP16.64■□□□□ 0.25
SF3A2-207ENST00000592839 TMEM117Q9H0C3 514 aa16.64■□□□□ 0.25
SF3A2-207ENST00000592839 DACT1Q9NYF0 836 aa16.64■□□□□ 0.25
SF3A2-207ENST00000592839 GRM6O15303 877 aa16.63■□□□□ 0.25
SF3A2-207ENST00000592839 DTNBO60941 627 aa16.63■□□□□ 0.25
SF3A2-207ENST00000592839 ZNF623O75123 536 aa16.63■□□□□ 0.25
SF3A2-207ENST00000592839 ATF7P17544 494 aaPredicted RBP16.63■□□□□ 0.25
SF3A2-207ENST00000592839 SFPQP23246 707 aaKnown RBP eCLIP16.63■□□□□ 0.25
SF3A2-207ENST00000592839 U2AF2P26368 475 aaKnown RBP eCLIP16.63■□□□□ 0.25
SF3A2-207ENST00000592839 KCNQ1P51787 676 aa16.63■□□□□ 0.25
SF3A2-207ENST00000592839 SAFBQ15424 915 aaKnown RBP eCLIP16.63■□□□□ 0.25
SF3A2-207ENST00000592839 OTUD6AQ7L8S5 288 aa16.63■□□□□ 0.25
SF3A2-207ENST00000592839 ECHDC2Q86YB7 292 aa16.63■□□□□ 0.25
SF3A2-207ENST00000592839 CCDC83Q8IWF9 413 aa16.63■□□□□ 0.25
SF3A2-207ENST00000592839 SPPL3Q8TCT6 385 aa16.63■□□□□ 0.25
SF3A2-207ENST00000592839 NFKBIZQ9BYH8 718 aa16.63■□□□□ 0.25
SF3A2-207ENST00000592839 TTC12Q9H892 705 aaPredicted RBP16.63■□□□□ 0.25
SF3A2-207ENST00000592839 ATP6V0A4Q9HBG4 840 aa16.63■□□□□ 0.25
SF3A2-207ENST00000592839 ANKEF1Q9NU02 776 aa16.63■□□□□ 0.25
SF3A2-207ENST00000592839 LZTS1Q9Y250 596 aa16.63■□□□□ 0.25
SF3A2-207ENST00000592839 CARNS1A5YM72 827 aa16.62■□□□□ 0.25
SF3A2-207ENST00000592839 DDX11L8A8MPP1 907 aa16.62■□□□□ 0.25
SF3A2-207ENST00000592839 ASAP2O43150 1006 aa16.62■□□□□ 0.25
SF3A2-207ENST00000592839 ITGB1P05556 798 aa16.62■□□□□ 0.25
SF3A2-207ENST00000592839 ZSCAN20P17040 1043 aaPredicted RBP16.62■□□□□ 0.25
SF3A2-207ENST00000592839 MUTP22033 750 aa16.62■□□□□ 0.25
SF3A2-207ENST00000592839 PLCB3Q01970 1234 aa16.62■□□□□ 0.25
SF3A2-207ENST00000592839 PUS10Q3MIT2 529 aaKnown RBP16.62■□□□□ 0.25
SF3A2-207ENST00000592839 PLA2G4FQ68DD2 849 aa16.62■□□□□ 0.25
SF3A2-207ENST00000592839 TRMT1LQ7Z2T5 733 aaKnown RBP16.62■□□□□ 0.25
SF3A2-207ENST00000592839 SRGAP1Q7Z6B7 1085 aa16.62■□□□□ 0.25
SF3A2-207ENST00000592839 TCP11Q8WWU5 503 aa16.62■□□□□ 0.25
SF3A2-207ENST00000592839 C8orf76Q96K31 380 aa16.62■□□□□ 0.25
SF3A2-207ENST00000592839 NECAB3Q96P71 396 aaPredicted RBP16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms