RNA–Protein interactions for RNA: ENST00000587457.1

PPP6R1-204, Transcript of protein phosphatase 6 regulatory subunit 1, humanhuman

TSL 2

Gene PPP6R1, Length 2,389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP6R1-204ENST00000587457 TMOD2Q9NZR1 351 aa17.31■□□□□ 0.36
PPP6R1-204ENST00000587457 CORO1CQ9ULV4 474 aaPredicted RBP17.31■□□□□ 0.36
PPP6R1-204ENST00000587457 SNUPNO95149 360 aaKnown RBP17.3■□□□□ 0.36
PPP6R1-204ENST00000587457 NDUFB10O96000 172 aa17.3■□□□□ 0.36
PPP6R1-204ENST00000587457 MTMR3Q13615 1198 aa17.3■□□□□ 0.36
PPP6R1-204ENST00000587457 HGSNATQ68CP4 663 aa17.3■□□□□ 0.36
PPP6R1-204ENST00000587457 CACNA2D4Q7Z3S7 1137 aa17.3■□□□□ 0.36
PPP6R1-204ENST00000587457 ZNF317Q96PQ6 595 aaPredicted RBP17.3■□□□□ 0.36
PPP6R1-204ENST00000587457 MTMR9Q96QG7 549 aa17.3■□□□□ 0.36
PPP6R1-204ENST00000587457 GMLQ99445 158 aa17.3■□□□□ 0.36
PPP6R1-204ENST00000587457 YIPF3Q9GZM5 350 aa17.3■□□□□ 0.36
PPP6R1-204ENST00000587457 ZNF70Q9UC06 446 aaPredicted RBP17.3■□□□□ 0.36
PPP6R1-204ENST00000587457 SSU72P8A0A1W2PR75 194 aa17.3■□□□□ 0.36
PPP6R1-204ENST00000587457 USP17L15C9J2P7 530 aa17.3■□□□□ 0.36
PPP6R1-204ENST00000587457 USP17L13C9JLJ4 530 aa17.3■□□□□ 0.36
PPP6R1-204ENST00000587457 USP17L11C9JVI0 530 aa17.3■□□□□ 0.36
PPP6R1-204ENST00000587457 USP17L18D6R9N7 530 aa17.3■□□□□ 0.36
PPP6R1-204ENST00000587457 USP17L22D6RA61 530 aa17.3■□□□□ 0.36
PPP6R1-204ENST00000587457 USP17L17D6RBQ6 530 aa17.3■□□□□ 0.36
PPP6R1-204ENST00000587457 USP17L19D6RCP7 530 aa17.3■□□□□ 0.36
PPP6R1-204ENST00000587457 USP17L20D6RJB6 530 aa17.3■□□□□ 0.36
PPP6R1-204ENST00000587457 KCNK3O14649 394 aa17.3■□□□□ 0.36
PPP6R1-204ENST00000587457 MYL1P05976 194 aa17.3■□□□□ 0.36
PPP6R1-204ENST00000587457 RWDD2BP57060 319 aa17.3■□□□□ 0.36
PPP6R1-204ENST00000587457 USP17L24Q0WX57 530 aa17.3■□□□□ 0.36
PPP6R1-204ENST00000587457 RBBP5Q15291 538 aaKnown RBP17.3■□□□□ 0.36
PPP6R1-204ENST00000587457 GRIPAP1Q4V328 841 aa17.3■□□□□ 0.36
PPP6R1-204ENST00000587457 THEMIS2Q5TEJ8 643 aa17.3■□□□□ 0.36
PPP6R1-204ENST00000587457 USP17L6PQ6QN14 398 aa17.3■□□□□ 0.36
PPP6R1-204ENST00000587457 PIGWQ7Z7B1 504 aa17.3■□□□□ 0.36
PPP6R1-204ENST00000587457 OGFOD1Q8N543 542 aa17.3■□□□□ 0.36
PPP6R1-204ENST00000587457 CENPTQ96BT3 561 aa17.3■□□□□ 0.36
PPP6R1-204ENST00000587457 SLC5A4Q9NY91 659 aa17.3■□□□□ 0.36
PPP6R1-204ENST00000587457 HDAC9Q9UKV0 1011 aa17.3■□□□□ 0.36
PPP6R1-204ENST00000587457 AGAP1Q9UPQ3 857 aa17.3■□□□□ 0.36
PPP6R1-204ENST00000587457 PCDHA1Q9Y5I3 950 aa17.3■□□□□ 0.36
PPP6R1-204ENST00000587457 KCNJ2P63252 427 aa17.29■□□□□ 0.36
PPP6R1-204ENST00000587457 IKQ13123 557 aaPredicted RBP17.29■□□□□ 0.36
PPP6R1-204ENST00000587457 ORC2Q13416 577 aaPredicted RBP17.29■□□□□ 0.36
PPP6R1-204ENST00000587457 ITIH4Q14624 930 aa17.29■□□□□ 0.36
PPP6R1-204ENST00000587457 TAF4BQ92750 862 aa17.29■□□□□ 0.36
PPP6R1-204ENST00000587457 MMTAG2Q9BU76 263 aaKnown RBP17.29■□□□□ 0.36
PPP6R1-204ENST00000587457 SEMA6BQ9H3T3 888 aa17.29■□□□□ 0.36
PPP6R1-204ENST00000587457 KCNMB3Q9NPA1 279 aa17.29■□□□□ 0.36
PPP6R1-204ENST00000587457 PNMA2Q9UL42 364 aa17.29■□□□□ 0.36
PPP6R1-204ENST00000587457 A0A1W2PRG0 241 aa17.29■□□□□ 0.36
PPP6R1-204ENST00000587457 ASAP2O43150 1006 aa17.29■□□□□ 0.36
PPP6R1-204ENST00000587457 SART1O43290 800 aaKnown RBP17.29■□□□□ 0.36
PPP6R1-204ENST00000587457 ZBTB7AO95365 584 aa17.29■□□□□ 0.36
PPP6R1-204ENST00000587457 TRPM8Q7Z2W7 1104 aa17.29■□□□□ 0.36
PPP6R1-204ENST00000587457 CCDC84Q86UT8 332 aaPredicted RBP17.29■□□□□ 0.36
PPP6R1-204ENST00000587457 CDAN1Q8IWY9 1227 aa17.29■□□□□ 0.36
PPP6R1-204ENST00000587457 SPICE1Q8N0Z3 855 aa17.29■□□□□ 0.36
PPP6R1-204ENST00000587457 SCFD2Q8WU76 684 aa17.29■□□□□ 0.36
PPP6R1-204ENST00000587457 HPS3Q969F9 1004 aa17.29■□□□□ 0.36
PPP6R1-204ENST00000587457 ELAC2Q9BQ52 826 aaKnown RBP17.29■□□□□ 0.36
PPP6R1-204ENST00000587457 AP1M1Q9BXS5 423 aa17.29■□□□□ 0.36
PPP6R1-204ENST00000587457 RBAK-RBAKDNI3L0D1 243 aa17.28■□□□□ 0.36
PPP6R1-204ENST00000587457 DAPK3O43293 454 aa17.28■□□□□ 0.36
PPP6R1-204ENST00000587457 ALADP13716 330 aa17.28■□□□□ 0.36
PPP6R1-204ENST00000587457 NQO1P15559 274 aaKnown RBP17.28■□□□□ 0.36
PPP6R1-204ENST00000587457 CHN1P15882 459 aa17.28■□□□□ 0.36
PPP6R1-204ENST00000587457 PECAM1P16284 738 aaPredicted RBP17.28■□□□□ 0.36
PPP6R1-204ENST00000587457 TAL1P17542 331 aaPredicted RBP17.28■□□□□ 0.36
PPP6R1-204ENST00000587457 GMCL1P1Q8NEA9 526 aa17.28■□□□□ 0.36
PPP6R1-204ENST00000587457 PRCCQ92733 491 aaPredicted RBP17.28■□□□□ 0.36
PPP6R1-204ENST00000587457 GJA10Q969M2 543 aa17.28■□□□□ 0.36
PPP6R1-204ENST00000587457 TLCD1Q96CP7 247 aa17.28■□□□□ 0.36
PPP6R1-204ENST00000587457 PCDHGC5Q9Y5F6 944 aa17.28■□□□□ 0.36
PPP6R1-204ENST00000587457 POTEMA6NI47 508 aa17.28■□□□□ 0.36
PPP6R1-204ENST00000587457 SEMA3FQ13275 785 aa17.28■□□□□ 0.36
PPP6R1-204ENST00000587457 TMC3Q7Z5M5 1100 aa17.28■□□□□ 0.36
PPP6R1-204ENST00000587457 NIM1KQ8IY84 436 aa17.28■□□□□ 0.36
PPP6R1-204ENST00000587457 LRRC34Q8IZ02 419 aa17.28■□□□□ 0.36
PPP6R1-204ENST00000587457 NLRC4Q9NPP4 1024 aa17.28■□□□□ 0.36
PPP6R1-204ENST00000587457 CPSF2Q9P2I0 782 aaKnown RBP17.28■□□□□ 0.36
PPP6R1-204ENST00000587457 F8VZ95 297 aa17.27■□□□□ 0.36
PPP6R1-204ENST00000587457 CEP104O60308 925 aa17.27■□□□□ 0.36
PPP6R1-204ENST00000587457 CAND2O75155 1236 aa17.27■□□□□ 0.36
PPP6R1-204ENST00000587457 MMEP08473 750 aa17.27■□□□□ 0.36
PPP6R1-204ENST00000587457 LINGO3P0C6S8 592 aa17.27■□□□□ 0.36
PPP6R1-204ENST00000587457 CCND1P24385 295 aa17.27■□□□□ 0.36
PPP6R1-204ENST00000587457 ECE1P42892 770 aa17.27■□□□□ 0.36
PPP6R1-204ENST00000587457 ALDH5A1P51649 535 aaPredicted RBP17.27■□□□□ 0.36
PPP6R1-204ENST00000587457 ASIC1P78348 528 aa17.27■□□□□ 0.36
PPP6R1-204ENST00000587457 DHX9Q08211 1270 aaKnown RBP17.27■□□□□ 0.36
PPP6R1-204ENST00000587457 SNX1Q13596 522 aa17.27■□□□□ 0.36
PPP6R1-204ENST00000587457 RPS6KA1Q15418 735 aa17.27■□□□□ 0.36
PPP6R1-204ENST00000587457 MAN2A1Q16706 1144 aa17.27■□□□□ 0.36
PPP6R1-204ENST00000587457 SLC9C1Q4G0N8 1177 aa17.27■□□□□ 0.36
PPP6R1-204ENST00000587457 SLC16A10Q8TF71 515 aa17.27■□□□□ 0.36
PPP6R1-204ENST00000587457 UIMC1Q96RL1 719 aa17.27■□□□□ 0.36
PPP6R1-204ENST00000587457 DDX25Q9UHL0 483 aaKnown RBP17.27■□□□□ 0.36
PPP6R1-204ENST00000587457 ZNRF3Q9ULT6 936 aa17.27■□□□□ 0.36
PPP6R1-204ENST00000587457 MYH7BA7E2Y1 1941 aa17.27■□□□□ 0.36
PPP6R1-204ENST00000587457 MYH4Q9Y623 1939 aa17.27■□□□□ 0.36
PPP6R1-204ENST00000587457 BHMG1C9JSJ3 638 aaPredicted RBP17.26■□□□□ 0.35
PPP6R1-204ENST00000587457 BLMHQ13867 455 aa17.26■□□□□ 0.35
PPP6R1-204ENST00000587457 USH1GQ495M9 461 aa17.26■□□□□ 0.35
PPP6R1-204ENST00000587457 FAM151AQ8WW52 585 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms