RNA–Protein interactions for RNA: ENST00000581003.5

CBX1-206, Transcript of chromobox 1, humanhuman

TSL 3

Gene CBX1, Length 812 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-206ENST00000581003 NLRP4Q96MN2 994 aa14.09□□□□□ -0.15
CBX1-206ENST00000581003 SCLT1Q96NL6 688 aa14.09□□□□□ -0.15
CBX1-206ENST00000581003 FDXACB1Q9BRP7 624 aaPredicted RBP14.09□□□□□ -0.15
CBX1-206ENST00000581003 FOXP1Q9H334 677 aaPredicted RBP14.09□□□□□ -0.15
CBX1-206ENST00000581003 SUCLA2Q9P2R7 463 aaPredicted RBP14.09□□□□□ -0.15
CBX1-206ENST00000581003 PCDHA12Q9UN75 941 aa14.09□□□□□ -0.15
CBX1-206ENST00000581003 NLRC5Q86WI3 1866 aa14.08□□□□□ -0.16
CBX1-206ENST00000581003 DENND3A2RUS2 1198 aa14.08□□□□□ -0.16
CBX1-206ENST00000581003 C9IYK1 514 aa14.08□□□□□ -0.16
CBX1-206ENST00000581003 BAG4O95429 457 aaKnown RBP14.08□□□□□ -0.16
CBX1-206ENST00000581003 TMOD1P28289 359 aa14.08□□□□□ -0.16
CBX1-206ENST00000581003 GJB2P29033 226 aa14.08□□□□□ -0.16
CBX1-206ENST00000581003 CTNNB1P35222 781 aa14.08□□□□□ -0.16
CBX1-206ENST00000581003 BTG3Q14201 252 aaPredicted RBP14.08□□□□□ -0.16
CBX1-206ENST00000581003 C4orf19Q8IY42 314 aa14.08□□□□□ -0.16
CBX1-206ENST00000581003 TMEM192Q8IY95 271 aa14.08□□□□□ -0.16
CBX1-206ENST00000581003 PIGOQ8TEQ8 1089 aa14.08□□□□□ -0.16
CBX1-206ENST00000581003 HSD17B14Q9BPX1 270 aa14.08□□□□□ -0.16
CBX1-206ENST00000581003 COL25A1Q9BXS0 654 aaPredicted RBP14.08□□□□□ -0.16
CBX1-206ENST00000581003 FTHL17Q9BXU8 183 aa14.08□□□□□ -0.16
CBX1-206ENST00000581003 BACH2Q9BYV9 841 aa14.08□□□□□ -0.16
CBX1-206ENST00000581003 XPNPEP1Q9NQW7 623 aa14.08□□□□□ -0.16
CBX1-206ENST00000581003 RGS18Q9NS28 235 aa14.08□□□□□ -0.16
CBX1-206ENST00000581003 RNF19AQ9NV58 838 aa14.08□□□□□ -0.16
CBX1-206ENST00000581003 PCDHB6Q9Y5E3 794 aa14.08□□□□□ -0.16
CBX1-206ENST00000581003 ATG2AQ2TAZ0 1938 aa14.07□□□□□ -0.16
CBX1-206ENST00000581003 GPR182O15218 404 aa14.07□□□□□ -0.16
CBX1-206ENST00000581003 GRM6O15303 877 aa14.07□□□□□ -0.16
CBX1-206ENST00000581003 MED24O75448 989 aa14.07□□□□□ -0.16
CBX1-206ENST00000581003 SPATA31C1P0DKV0 1188 aa14.07□□□□□ -0.16
CBX1-206ENST00000581003 POU3F3P20264 500 aaPredicted RBP14.07□□□□□ -0.16
CBX1-206ENST00000581003 EIF4BP23588 611 aaKnown RBP14.07□□□□□ -0.16
CBX1-206ENST00000581003 TECP42680 631 aa14.07□□□□□ -0.16
CBX1-206ENST00000581003 SARSP49591 514 aaKnown RBP14.07□□□□□ -0.16
CBX1-206ENST00000581003 POLGP54098 1239 aaPredicted RBP14.07□□□□□ -0.16
CBX1-206ENST00000581003 GNL2Q13823 731 aaKnown RBP14.07□□□□□ -0.16
CBX1-206ENST00000581003 EMC2Q15006 297 aa14.07□□□□□ -0.16
CBX1-206ENST00000581003 SKIV2LQ15477 1246 aaKnown RBP14.07□□□□□ -0.16
CBX1-206ENST00000581003 LONRF3Q496Y0 759 aa14.07□□□□□ -0.16
CBX1-206ENST00000581003 XKR9Q5GH70 373 aa14.07□□□□□ -0.16
CBX1-206ENST00000581003 POTEGQ6S5H5 508 aa14.07□□□□□ -0.16
CBX1-206ENST00000581003 C4orf32Q8N8J7 132 aa14.07□□□□□ -0.16
CBX1-206ENST00000581003 DHX33Q9H6R0 707 aaKnown RBP14.07□□□□□ -0.16
CBX1-206ENST00000581003 ZSWIM4Q9H7M6 989 aa14.07□□□□□ -0.16
CBX1-206ENST00000581003 MINDY3Q9H8M7 445 aa14.07□□□□□ -0.16
CBX1-206ENST00000581003 GTF3C3Q9Y5Q9 886 aa14.07□□□□□ -0.16
CBX1-206ENST00000581003 PP2D1A8MPX8 630 aa14.06□□□□□ -0.16
CBX1-206ENST00000581003 GTPBP6O43824 516 aaPredicted RBP14.06□□□□□ -0.16
CBX1-206ENST00000581003 OR52Z1P0C646 297 aa14.06□□□□□ -0.16
CBX1-206ENST00000581003 U2AF2P26368 475 aaKnown RBP eCLIP14.06□□□□□ -0.163e-7■■■■■ 27.8
CBX1-206ENST00000581003 GPM6BQ13491 265 aa14.06□□□□□ -0.16
CBX1-206ENST00000581003 IL17AQ16552 155 aa14.06□□□□□ -0.16
CBX1-206ENST00000581003 ECM1Q16610 540 aa14.06□□□□□ -0.16
CBX1-206ENST00000581003 SLC24A5Q71RS6 500 aa14.06□□□□□ -0.16
CBX1-206ENST00000581003 CATSPER3Q86XQ3 398 aa14.06□□□□□ -0.16
CBX1-206ENST00000581003 RNF169Q8NCN4 708 aa14.06□□□□□ -0.16
CBX1-206ENST00000581003 PRPF31Q8WWY3 499 aaKnown RBP14.06□□□□□ -0.16
CBX1-206ENST00000581003 IFT122Q9HBG6 1241 aa14.06□□□□□ -0.16
CBX1-206ENST00000581003 PCDHGC5Q9Y5F6 944 aa14.06□□□□□ -0.16
CBX1-206ENST00000581003 TTC3P53804 2025 aa14.06□□□□□ -0.16
CBX1-206ENST00000581003 PRRC2BQ5JSZ5 2229 aaKnown RBP14.05□□□□□ -0.16
CBX1-206ENST00000581003 TBKBP1A7MCY6 615 aa14.05□□□□□ -0.16
CBX1-206ENST00000581003 MEIS3P2A8K0S8 358 aa14.05□□□□□ -0.16
CBX1-206ENST00000581003 H3BNC9 293 aa14.05□□□□□ -0.16
CBX1-206ENST00000581003 DLL1O00548 723 aa14.05□□□□□ -0.16
CBX1-206ENST00000581003 SRGAP2CP0DJJ0 459 aa14.05□□□□□ -0.16
CBX1-206ENST00000581003 ATF7P17544 494 aaPredicted RBP14.05□□□□□ -0.16
CBX1-206ENST00000581003 DNAJB1P25685 340 aa14.05□□□□□ -0.16
CBX1-206ENST00000581003 BMPR1AP36894 532 aa14.05□□□□□ -0.16
CBX1-206ENST00000581003 PBX3P40426 434 aa14.05□□□□□ -0.16
CBX1-206ENST00000581003 KCNQ1P51787 676 aa14.05□□□□□ -0.16
CBX1-206ENST00000581003 MCTP1Q6DN14 999 aa14.05□□□□□ -0.16
CBX1-206ENST00000581003 ASAP3Q8TDY4 903 aa14.05□□□□□ -0.16
CBX1-206ENST00000581003 SLC7A3Q8WY07 619 aa14.05□□□□□ -0.16
CBX1-206ENST00000581003 CLP1Q92989 425 aaKnown RBP14.05□□□□□ -0.16
CBX1-206ENST00000581003 ALG13Q9NP73 1137 aaKnown RBP14.05□□□□□ -0.16
CBX1-206ENST00000581003 GPRC5CQ9NQ84 441 aa14.05□□□□□ -0.16
CBX1-206ENST00000581003 THEGQ9P2T0 379 aa14.05□□□□□ -0.16
CBX1-206ENST00000581003 LRFN2Q9ULH4 789 aa14.05□□□□□ -0.16
CBX1-206ENST00000581003 COL4A3BPQ9Y5P4 624 aa14.05□□□□□ -0.16
CBX1-206ENST00000581003 RALGAPA2Q2PPJ7 1873 aa14.05□□□□□ -0.16
CBX1-206ENST00000581003 USO1O60763 962 aaKnown RBP14.04□□□□□ -0.16
CBX1-206ENST00000581003 LYPLA2O95372 231 aa14.04□□□□□ -0.16
CBX1-206ENST00000581003 RFC5P40937 340 aa14.04□□□□□ -0.16
CBX1-206ENST00000581003 RARRES1P49788 294 aa14.04□□□□□ -0.16
CBX1-206ENST00000581003 FAM189BP81408 668 aa14.04□□□□□ -0.16
CBX1-206ENST00000581003 LAMTOR4Q0VGL1 99 aa14.04□□□□□ -0.16
CBX1-206ENST00000581003 CAMK1Q14012 370 aa14.04□□□□□ -0.16
CBX1-206ENST00000581003 CLLU1OSQ5K130 101 aa14.04□□□□□ -0.16
CBX1-206ENST00000581003 LRRC55Q6ZSA7 311 aa14.04□□□□□ -0.16
CBX1-206ENST00000581003 MAEAQ7L5Y9 396 aa14.04□□□□□ -0.16
CBX1-206ENST00000581003 CMTR2Q8IYT2 770 aaKnown RBP14.04□□□□□ -0.16
CBX1-206ENST00000581003 LPPQ93052 612 aa14.04□□□□□ -0.16
CBX1-206ENST00000581003 GCOM2Q9BZD3 368 aaPredicted RBP14.04□□□□□ -0.16
CBX1-206ENST00000581003 POLD4Q9HCU8 107 aa14.04□□□□□ -0.16
CBX1-206ENST00000581003 C1orf112Q9NSG2 853 aa14.04□□□□□ -0.16
CBX1-206ENST00000581003 PCDHB7Q9Y5E2 793 aa14.04□□□□□ -0.16
CBX1-206ENST00000581003 C5orf67F2Z3F1 127 aa14.03□□□□□ -0.16
CBX1-206ENST00000581003 STAG3L1P0CL83 205 aa14.03□□□□□ -0.16
CBX1-206ENST00000581003 CDC25AP30304 524 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms