RNA–Protein interactions for RNA: ENST00000569422.1

LINC00558-201, long intergenic non-protein coding RNA 558, humanhuman

TSL 1 (best) BASIC

Gene LINC00558, Length 3,163 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00558-201ENST00000569422 MYH4Q9Y623 1939 aa9.55□□□□□ -0.88
LINC00558-201ENST00000569422 TARSL2A2RTX5 802 aaKnown RBP9.55□□□□□ -0.88
LINC00558-201ENST00000569422 K7ENM7 598 aa9.55□□□□□ -0.88
LINC00558-201ENST00000569422 PPP1R12BO60237 982 aaPredicted RBP9.55□□□□□ -0.88
LINC00558-201ENST00000569422 MARSP56192 900 aaKnown RBP9.55□□□□□ -0.88
LINC00558-201ENST00000569422 EPHA7Q15375 998 aa9.55□□□□□ -0.88
LINC00558-201ENST00000569422 CBWD6Q4V339 395 aa9.55□□□□□ -0.88
LINC00558-201ENST00000569422 CBWD3Q5JTY5 395 aa9.55□□□□□ -0.88
LINC00558-201ENST00000569422 CBWD5Q5RIA9 395 aa9.55□□□□□ -0.88
LINC00558-201ENST00000569422 NAA35Q5VZE5 725 aa9.55□□□□□ -0.88
LINC00558-201ENST00000569422 KCTD16Q68DU8 428 aa9.55□□□□□ -0.88
LINC00558-201ENST00000569422 FOXR1Q6PIV2 292 aa9.55□□□□□ -0.88
LINC00558-201ENST00000569422 MIER3Q7Z3K6 550 aa9.55□□□□□ -0.88
LINC00558-201ENST00000569422 EXOC4Q96A65 974 aa9.55□□□□□ -0.88
LINC00558-201ENST00000569422 NAGPAQ9UK23 515 aa9.55□□□□□ -0.88
LINC00558-201ENST00000569422 FRMD4BQ9Y2L6 1034 aa9.55□□□□□ -0.88
LINC00558-201ENST00000569422 SMCHD1A6NHR9 2005 aa9.54□□□□□ -0.88
LINC00558-201ENST00000569422 SCN9AQ15858 1988 aa9.54□□□□□ -0.88
LINC00558-201ENST00000569422 HIP1RO75146 1068 aa9.54□□□□□ -0.88
LINC00558-201ENST00000569422 ITGB5P18084 799 aa9.54□□□□□ -0.88
LINC00558-201ENST00000569422 PSMC2P35998 433 aaKnown RBP9.54□□□□□ -0.88
LINC00558-201ENST00000569422 RPS6KA1Q15418 735 aa9.54□□□□□ -0.88
LINC00558-201ENST00000569422 MMGT1Q8N4V1 131 aa9.54□□□□□ -0.88
LINC00558-201ENST00000569422 RNF10Q8N5U6 811 aaKnown RBP9.54□□□□□ -0.88
LINC00558-201ENST00000569422 SUPT20HQ8NEM7 779 aa9.54□□□□□ -0.88
LINC00558-201ENST00000569422 RUFY1Q96T51 708 aa9.54□□□□□ -0.88
LINC00558-201ENST00000569422 TEKT3Q9BXF9 490 aa9.54□□□□□ -0.88
LINC00558-201ENST00000569422 STK32BQ9NY57 414 aa9.54□□□□□ -0.88
LINC00558-201ENST00000569422 CALCOCO1Q9P1Z2 691 aa9.54□□□□□ -0.88
LINC00558-201ENST00000569422 COL20A1Q9P218 1284 aa9.54□□□□□ -0.88
LINC00558-201ENST00000569422 TCEAL9Q9UHQ7 104 aa9.54□□□□□ -0.88
LINC00558-201ENST00000569422 CTDP1Q9Y5B0 961 aaPredicted RBP9.54□□□□□ -0.88
LINC00558-201ENST00000569422 GOLGA8IPA6NC78 632 aa9.54□□□□□ -0.88
LINC00558-201ENST00000569422 GOLGA8JA6NMD2 632 aa9.54□□□□□ -0.88
LINC00558-201ENST00000569422 EVI5O60447 810 aa9.54□□□□□ -0.88
LINC00558-201ENST00000569422 FAM153BP0C7A2 387 aa9.54□□□□□ -0.88
LINC00558-201ENST00000569422 FKBP1AP62942 108 aaKnown RBP9.54□□□□□ -0.88
LINC00558-201ENST00000569422 HLTFQ14527 1009 aaKnown RBP eCLIP9.54□□□□□ -0.88
LINC00558-201ENST00000569422 FAM153CQ494X1 144 aa9.54□□□□□ -0.88
LINC00558-201ENST00000569422 PRAMEF18Q5VWM3 479 aa9.54□□□□□ -0.88
LINC00558-201ENST00000569422 NSMFQ6X4W1 530 aa9.54□□□□□ -0.88
LINC00558-201ENST00000569422 ZNF720Q7Z2F6 126 aa9.54□□□□□ -0.88
LINC00558-201ENST00000569422 DAAM2Q86T65 1068 aa9.54□□□□□ -0.88
LINC00558-201ENST00000569422 TSEN2Q8NCE0 465 aaKnown RBP9.54□□□□□ -0.88
LINC00558-201ENST00000569422 AFAP1L1Q8TED9 768 aa9.54□□□□□ -0.88
LINC00558-201ENST00000569422 NACC1Q96RE7 527 aa9.54□□□□□ -0.88
LINC00558-201ENST00000569422 CENPHQ9H3R5 247 aa9.54□□□□□ -0.88
LINC00558-201ENST00000569422 METTL14Q9HCE5 456 aaKnown RBP9.54□□□□□ -0.88
LINC00558-201ENST00000569422 OSGEPQ9NPF4 335 aa9.54□□□□□ -0.88
LINC00558-201ENST00000569422 GPRC5CQ9NQ84 441 aa9.54□□□□□ -0.88
LINC00558-201ENST00000569422 KCNH7Q9NS40 1196 aa9.54□□□□□ -0.88
LINC00558-201ENST00000569422 FAM153AQ9UHL3 310 aa9.54□□□□□ -0.88
LINC00558-201ENST00000569422 DNAJC12Q9UKB3 198 aa9.54□□□□□ -0.88
LINC00558-201ENST00000569422 FLOT1O75955 427 aa9.53□□□□□ -0.88
LINC00558-201ENST00000569422 EGFRP00533 1210 aa9.53□□□□□ -0.88
LINC00558-201ENST00000569422 CYP3A4P08684 503 aa9.53□□□□□ -0.88
LINC00558-201ENST00000569422 DPEP1P16444 411 aa9.53□□□□□ -0.88
LINC00558-201ENST00000569422 CAP2P40123 477 aa9.53□□□□□ -0.88
LINC00558-201ENST00000569422 DLG4P78352 724 aa9.53□□□□□ -0.88
LINC00558-201ENST00000569422 DRAP1Q14919 205 aaPredicted RBP9.53□□□□□ -0.88
LINC00558-201ENST00000569422 MCTP2Q6DN12 878 aa9.53□□□□□ -0.88
LINC00558-201ENST00000569422 ZSWIM2Q8NEG5 633 aa9.53□□□□□ -0.88
LINC00558-201ENST00000569422 SYN2Q92777 582 aaPredicted RBP9.53□□□□□ -0.88
LINC00558-201ENST00000569422 SLX4Q8IY92 1834 aa9.53□□□□□ -0.88
LINC00558-201ENST00000569422 MYH10P35580 1976 aa9.53□□□□□ -0.88
LINC00558-201ENST00000569422 LTBP1Q14766 1721 aa9.53□□□□□ -0.88
LINC00558-201ENST00000569422 RBAK-RBAKDNI3L0D1 243 aa9.53□□□□□ -0.88
LINC00558-201ENST00000569422 AGPSO00116 658 aa9.53□□□□□ -0.88
LINC00558-201ENST00000569422 PIK3CDO00329 1044 aa9.53□□□□□ -0.88
LINC00558-201ENST00000569422 RXRBP28702 533 aa9.53□□□□□ -0.88
LINC00558-201ENST00000569422 STAT1P42224 750 aa9.53□□□□□ -0.88
LINC00558-201ENST00000569422 VASPP50552 380 aaPredicted RBP9.53□□□□□ -0.88
LINC00558-201ENST00000569422 MEI1Q5TIA1 1274 aa9.53□□□□□ -0.88
LINC00558-201ENST00000569422 PADI6Q6TGC4 694 aa9.53□□□□□ -0.88
LINC00558-201ENST00000569422 PEX26Q7Z412 305 aa9.53□□□□□ -0.88
LINC00558-201ENST00000569422 VPS36Q86VN1 386 aa9.53□□□□□ -0.88
LINC00558-201ENST00000569422 DDX42Q86XP3 938 aaKnown RBP eCLIP9.53□□□□□ -0.88
LINC00558-201ENST00000569422 MED4Q9NPJ6 270 aa9.53□□□□□ -0.88
LINC00558-201ENST00000569422 AGPAT3Q9NRZ7 376 aa9.53□□□□□ -0.88
LINC00558-201ENST00000569422 TMEM110-MUSTN1A8MSY1 372 aa9.53□□□□□ -0.88
LINC00558-201ENST00000569422 DDX3XO00571 662 aaKnown RBP eCLIP9.53□□□□□ -0.88
LINC00558-201ENST00000569422 KRT14P02533 472 aa9.53□□□□□ -0.88
LINC00558-201ENST00000569422 VIL1P09327 827 aaKnown RBP9.53□□□□□ -0.88
LINC00558-201ENST00000569422 H2AFZP0C0S5 128 aa9.53□□□□□ -0.88
LINC00558-201ENST00000569422 PRLRP16471 622 aa9.53□□□□□ -0.88
LINC00558-201ENST00000569422 GAP43P17677 238 aa9.53□□□□□ -0.88
LINC00558-201ENST00000569422 GCLMP48507 274 aa9.53□□□□□ -0.88
LINC00558-201ENST00000569422 FMO5P49326 533 aa9.53□□□□□ -0.88
LINC00558-201ENST00000569422 RASA3Q14644 834 aa9.53□□□□□ -0.88
LINC00558-201ENST00000569422 LLGL1Q15334 1064 aa9.53□□□□□ -0.88
LINC00558-201ENST00000569422 H2AFVQ71UI9 128 aa9.53□□□□□ -0.88
LINC00558-201ENST00000569422 SLC5A5Q92911 643 aa9.53□□□□□ -0.88
LINC00558-201ENST00000569422 TRIM31Q9BZY9 425 aa9.53□□□□□ -0.88
LINC00558-201ENST00000569422 RANBP17Q9H2T7 1088 aaKnown RBP9.53□□□□□ -0.88
LINC00558-201ENST00000569422 EHMT1Q9H9B1 1298 aa9.53□□□□□ -0.88
LINC00558-201ENST00000569422 TUFT1Q9NNX1 390 aa9.53□□□□□ -0.88
LINC00558-201ENST00000569422 SIX2Q9NPC8 291 aa9.53□□□□□ -0.88
LINC00558-201ENST00000569422 RSPH14Q9UHP6 348 aa9.53□□□□□ -0.88
LINC00558-201ENST00000569422 ATRNL1Q5VV63 1379 aa9.53□□□□□ -0.88
LINC00558-201ENST00000569422 ZMYM2Q9UBW7 1377 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms