RNA–Protein interactions for RNA: ENST00000565210.5

CDH11-211, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 542 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-211ENST00000565210 PPM1EQ8WY54 764 aa25.07■■□□□ 1.6
CDH11-211ENST00000565210 DHX33Q9H6R0 707 aaKnown RBP25.07■■□□□ 1.6
CDH11-211ENST00000565210 MTUS1Q9ULD2 1270 aa25.07■■□□□ 1.6
CDH11-211ENST00000565210 EVPLQ92817 2033 aa25.07■■□□□ 1.6
CDH11-211ENST00000565210 RFXAPO00287 272 aa25.06■■□□□ 1.6
CDH11-211ENST00000565210 WNT7AO00755 349 aa25.06■■□□□ 1.6
CDH11-211ENST00000565210 DGKIO75912 1065 aa25.06■■□□□ 1.6
CDH11-211ENST00000565210 TECP42680 631 aa25.06■■□□□ 1.6
CDH11-211ENST00000565210 PSPC1Q8WXF1 523 aaKnown RBP25.06■■□□□ 1.6
CDH11-211ENST00000565210 LINC01599Q8WXQ3 324 aa25.06■■□□□ 1.6
CDH11-211ENST00000565210 TUFT1Q9NNX1 390 aa25.06■■□□□ 1.6
CDH11-211ENST00000565210 WRAP73Q9P2S5 460 aaPredicted RBP25.06■■□□□ 1.6
CDH11-211ENST00000565210 ADGRA3Q8IWK6 1321 aa25.06■■□□□ 1.6
CDH11-211ENST00000565210 LAD1O00515 517 aa25.05■■□□□ 1.6
CDH11-211ENST00000565210 SFPQP23246 707 aaKnown RBP eCLIP25.05■■□□□ 1.6
CDH11-211ENST00000565210 GRB10Q13322 594 aa25.05■■□□□ 1.6
CDH11-211ENST00000565210 RILPL1Q5EBL4 403 aa25.05■■□□□ 1.6
CDH11-211ENST00000565210 LARP1BQ659C4 914 aaKnown RBP25.05■■□□□ 1.6
CDH11-211ENST00000565210 HAUS3Q68CZ6 603 aa25.05■■□□□ 1.6
CDH11-211ENST00000565210 PHF6Q8IWS0 365 aaKnown RBP eCLIP25.05■■□□□ 1.6
CDH11-211ENST00000565210 TMEM192Q8IY95 271 aa25.05■■□□□ 1.6
CDH11-211ENST00000565210 ZNF689Q96CS4 500 aaPredicted RBP25.05■■□□□ 1.6
CDH11-211ENST00000565210 MTRQ99707 1265 aa25.05■■□□□ 1.6
CDH11-211ENST00000565210 DACT1Q9NYF0 836 aa25.05■■□□□ 1.6
CDH11-211ENST00000565210 MTCH2Q9Y6C9 303 aa25.05■■□□□ 1.6
CDH11-211ENST00000565210 POTEMA6NI47 508 aa25.04■■□□□ 1.6
CDH11-211ENST00000565210 DGAT1O75907 488 aa25.04■■□□□ 1.6
CDH11-211ENST00000565210 RB1P06400 928 aa25.04■■□□□ 1.6
CDH11-211ENST00000565210 DRP2Q13474 957 aa25.04■■□□□ 1.6
CDH11-211ENST00000565210 PTPROQ16827 1216 aa25.04■■□□□ 1.6
CDH11-211ENST00000565210 EPC2Q52LR7 807 aa25.04■■□□□ 1.6
CDH11-211ENST00000565210 CMTR2Q8IYT2 770 aaKnown RBP25.04■■□□□ 1.6
CDH11-211ENST00000565210 MICALL1Q8N3F8 863 aa25.04■■□□□ 1.6
CDH11-211ENST00000565210 C17orf80Q9BSJ5 609 aa25.04■■□□□ 1.6
CDH11-211ENST00000565210 ELAC1Q9H777 363 aaKnown RBP25.04■■□□□ 1.6
CDH11-211ENST00000565210 ATP6V0A4Q9HBG4 840 aa25.04■■□□□ 1.6
CDH11-211ENST00000565210 CHST12Q9NRB3 414 aa25.04■■□□□ 1.6
CDH11-211ENST00000565210 COL4A3BPQ9Y5P4 624 aa25.04■■□□□ 1.6
CDH11-211ENST00000565210 MYO9BQ13459 2157 aa25.04■■□□□ 1.6
CDH11-211ENST00000565210 PTPRSQ13332 1948 aa25.04■■□□□ 1.6
CDH11-211ENST00000565210 WDR81Q562E7 1941 aa25.04■■□□□ 1.6
CDH11-211ENST00000565210 SIP14410 1827 aa25.03■■□□□ 1.6
CDH11-211ENST00000565210 A0A087WZ62 844 aa25.03■■□□□ 1.6
CDH11-211ENST00000565210 EPOPA6NHQ4 379 aa25.03■■□□□ 1.6
CDH11-211ENST00000565210 HOXA2O43364 376 aa25.03■■□□□ 1.6
CDH11-211ENST00000565210 MUTP22033 750 aa25.03■■□□□ 1.6
CDH11-211ENST00000565210 EMC2Q15006 297 aa25.03■■□□□ 1.6
CDH11-211ENST00000565210 CCDC85BQ15834 202 aaPredicted RBP25.03■■□□□ 1.6
CDH11-211ENST00000565210 ZNF668Q96K58 619 aaPredicted RBP25.03■■□□□ 1.6
CDH11-211ENST00000565210 NLRP4Q96MN2 994 aa25.03■■□□□ 1.6
CDH11-211ENST00000565210 NACC1Q96RE7 527 aa25.03■■□□□ 1.6
CDH11-211ENST00000565210 FDXACB1Q9BRP7 624 aaPredicted RBP25.03■■□□□ 1.6
CDH11-211ENST00000565210 POLR3CQ9BUI4 534 aaPredicted RBP25.03■■□□□ 1.6
CDH11-211ENST00000565210 C9IYK1 514 aa25.02■■□□□ 1.6
CDH11-211ENST00000565210 PDCP20941 246 aa25.02■■□□□ 1.6
CDH11-211ENST00000565210 IBSPP21815 317 aaPredicted RBP25.02■■□□□ 1.6
CDH11-211ENST00000565210 PDIA5Q14554 519 aa25.02■■□□□ 1.6
CDH11-211ENST00000565210 MXD4Q14582 209 aaPredicted RBP25.02■■□□□ 1.6
CDH11-211ENST00000565210 TMEM161AQ9NX61 479 aa25.02■■□□□ 1.6
CDH11-211ENST00000565210 MGEA5O60502 916 aa25.01■■□□□ 1.59
CDH11-211ENST00000565210 RPA1P27694 616 aa25.01■■□□□ 1.59
CDH11-211ENST00000565210 FXR2P51116 673 aaKnown RBP eCLIP25.01■■□□□ 1.59
CDH11-211ENST00000565210 FAM189BP81408 668 aa25.01■■□□□ 1.59
CDH11-211ENST00000565210 PTGDRQ13258 359 aa25.01■■□□□ 1.59
CDH11-211ENST00000565210 CUL4AQ13619 759 aa25.01■■□□□ 1.59
CDH11-211ENST00000565210 DSC3Q14574 896 aa25.01■■□□□ 1.59
CDH11-211ENST00000565210 SRGAP1Q7Z6B7 1085 aa25.01■■□□□ 1.59
CDH11-211ENST00000565210 CRIPAKQ8N1N5 446 aa25.01■■□□□ 1.59
CDH11-211ENST00000565210 ZNF579Q8NAF0 562 aaKnown RBP25.01■■□□□ 1.59
CDH11-211ENST00000565210 GDPD5Q8WTR4 605 aa25.01■■□□□ 1.59
CDH11-211ENST00000565210 PRPF31Q8WWY3 499 aaKnown RBP25.01■■□□□ 1.59
CDH11-211ENST00000565210 TMEM143Q96AN5 459 aa25.01■■□□□ 1.59
CDH11-211ENST00000565210 C11orf84Q9BUA3 381 aaPredicted RBP25.01■■□□□ 1.59
CDH11-211ENST00000565210 PLVAPQ9BX97 442 aa25.01■■□□□ 1.59
CDH11-211ENST00000565210 RC3H2Q9HBD1 1191 aaKnown RBP25.01■■□□□ 1.59
CDH11-211ENST00000565210 LRWD1Q9UFC0 647 aa25.01■■□□□ 1.59
CDH11-211ENST00000565210 TTC3P53804 2025 aa25.01■■□□□ 1.59
CDH11-211ENST00000565210 COL4A6Q14031 1691 aa25.01■■□□□ 1.59
CDH11-211ENST00000565210 H3BNC9 293 aa25■■□□□ 1.59
CDH11-211ENST00000565210 RBAK-RBAKDNI3L0D1 243 aa25■■□□□ 1.59
CDH11-211ENST00000565210 SKIP12755 728 aa25■■□□□ 1.59
CDH11-211ENST00000565210 CTNNB1P35222 781 aa25■■□□□ 1.59
CDH11-211ENST00000565210 BMPR1AP36894 532 aa25■■□□□ 1.59
CDH11-211ENST00000565210 GPM6BQ13491 265 aa25■■□□□ 1.59
CDH11-211ENST00000565210 TFDP1Q14186 410 aa25■■□□□ 1.59
CDH11-211ENST00000565210 SKIV2LQ15477 1246 aaKnown RBP25■■□□□ 1.59
CDH11-211ENST00000565210 CATSPER4Q7RTX7 472 aa25■■□□□ 1.59
CDH11-211ENST00000565210 SPRED2Q7Z698 418 aa25■■□□□ 1.59
CDH11-211ENST00000565210 CATSPER3Q86XQ3 398 aa25■■□□□ 1.59
CDH11-211ENST00000565210 CLP1Q92989 425 aaKnown RBP25■■□□□ 1.59
CDH11-211ENST00000565210 PCDHB6Q9Y5E3 794 aa25■■□□□ 1.59
CDH11-211ENST00000565210 ZBTB39O15060 712 aa24.99■■□□□ 1.59
CDH11-211ENST00000565210 LPXNO60711 386 aa24.99■■□□□ 1.59
CDH11-211ENST00000565210 SRGAP2CP0DJJ0 459 aa24.99■■□□□ 1.59
CDH11-211ENST00000565210 PRPHP41219 470 aa24.99■■□□□ 1.59
CDH11-211ENST00000565210 RARRES1P49788 294 aa24.99■■□□□ 1.59
CDH11-211ENST00000565210 TOB1P50616 345 aaPredicted RBP24.99■■□□□ 1.59
CDH11-211ENST00000565210 NCBP1Q09161 790 aaKnown RBP24.99■■□□□ 1.59
CDH11-211ENST00000565210 LAMTOR4Q0VGL1 99 aa24.99■■□□□ 1.59
CDH11-211ENST00000565210 PCBP1Q15365 356 aaKnown RBP eCLIP24.99■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms