RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 MAPTP10636 758 aaKnown RBP20.92■□□□□ 0.94
SMPD3-203ENST00000563226 MAGEA1P43355 309 aa20.92■□□□□ 0.94
SMPD3-203ENST00000563226 PEX3P56589 373 aa20.92■□□□□ 0.94
SMPD3-203ENST00000563226 FAM102BQ5T8I3 360 aa20.92■□□□□ 0.94
SMPD3-203ENST00000563226 GADL1Q6ZQY3 521 aa20.92■□□□□ 0.94
SMPD3-203ENST00000563226 TRAPPC11Q7Z392 1133 aa20.92■□□□□ 0.94
SMPD3-203ENST00000563226 RDM1Q8NG50 284 aa20.92■□□□□ 0.94
SMPD3-203ENST00000563226 SECISBP2LQ93073 1101 aaKnown RBP20.92■□□□□ 0.94
SMPD3-203ENST00000563226 CAPN6Q9Y6Q1 641 aa20.92■□□□□ 0.94
SMPD3-203ENST00000563226 SLC16A4O15374 487 aa20.91■□□□□ 0.94
SMPD3-203ENST00000563226 CHMP4BP1P59074 171 aa20.91■□□□□ 0.94
SMPD3-203ENST00000563226 ASIC2Q16515 512 aa20.91■□□□□ 0.94
SMPD3-203ENST00000563226 RDH13Q8NBN7 331 aa20.91■□□□□ 0.94
SMPD3-203ENST00000563226 EHBP1Q8NDI1 1231 aa20.91■□□□□ 0.94
SMPD3-203ENST00000563226 GOLGA1Q92805 767 aa20.91■□□□□ 0.94
SMPD3-203ENST00000563226 OTUD5Q96G74 571 aa20.91■□□□□ 0.94
SMPD3-203ENST00000563226 SYT17Q9BSW7 474 aa20.91■□□□□ 0.94
SMPD3-203ENST00000563226 TSGA10Q9BZW7 698 aa20.91■□□□□ 0.94
SMPD3-203ENST00000563226 PCIF1Q9H4Z3 704 aa20.91■□□□□ 0.94
SMPD3-203ENST00000563226 JPH1Q9HDC5 661 aaPredicted RBP20.91■□□□□ 0.94
SMPD3-203ENST00000563226 SALL4Q9UJQ4 1053 aa20.91■□□□□ 0.94
SMPD3-203ENST00000563226 FRMD4BQ9Y2L6 1034 aa20.91■□□□□ 0.94
SMPD3-203ENST00000563226 RBAK-RBAKDNI3L0D1 243 aa20.9■□□□□ 0.94
SMPD3-203ENST00000563226 ZSCAN20P17040 1043 aaPredicted RBP20.9■□□□□ 0.94
SMPD3-203ENST00000563226 SOX10P56693 466 aa20.9■□□□□ 0.94
SMPD3-203ENST00000563226 SP2Q02086 613 aa20.9■□□□□ 0.94
SMPD3-203ENST00000563226 TUBB2AQ13885 445 aa20.9■□□□□ 0.94
SMPD3-203ENST00000563226 CBWD6Q4V339 395 aa20.9■□□□□ 0.94
SMPD3-203ENST00000563226 CBWD3Q5JTY5 395 aa20.9■□□□□ 0.94
SMPD3-203ENST00000563226 CBWD5Q5RIA9 395 aa20.9■□□□□ 0.94
SMPD3-203ENST00000563226 HAUS6Q7Z4H7 955 aa20.9■□□□□ 0.94
SMPD3-203ENST00000563226 SLC9A9Q8IVB4 645 aa20.9■□□□□ 0.94
SMPD3-203ENST00000563226 CCDC60Q8IWA6 550 aaPredicted RBP20.9■□□□□ 0.94
SMPD3-203ENST00000563226 ZSWIM2Q8NEG5 633 aa20.9■□□□□ 0.94
SMPD3-203ENST00000563226 GOLGA5Q8TBA6 731 aa20.9■□□□□ 0.94
SMPD3-203ENST00000563226 DRC1Q96MC2 740 aa20.9■□□□□ 0.94
SMPD3-203ENST00000563226 CBWD1Q9BRT8 395 aa20.9■□□□□ 0.94
SMPD3-203ENST00000563226 TUBB2BQ9BVA1 445 aa20.9■□□□□ 0.94
SMPD3-203ENST00000563226 CCDC94Q9BW85 323 aaPredicted RBP20.9■□□□□ 0.94
SMPD3-203ENST00000563226 NFASCO94856 1347 aa20.9■□□□□ 0.94
SMPD3-203ENST00000563226 SPATA31C2B4DYI2 1134 aa20.9■□□□□ 0.94
SMPD3-203ENST00000563226 EXOC3O60645 756 aa20.9■□□□□ 0.94
SMPD3-203ENST00000563226 MOCS3O95396 460 aa20.9■□□□□ 0.94
SMPD3-203ENST00000563226 FMO5P49326 533 aa20.9■□□□□ 0.94
SMPD3-203ENST00000563226 KLHL30Q0D2K2 578 aa20.9■□□□□ 0.94
SMPD3-203ENST00000563226 SWSAP1Q6NVH7 229 aa20.9■□□□□ 0.94
SMPD3-203ENST00000563226 IRF2BP2Q7Z5L9 587 aa20.9■□□□□ 0.94
SMPD3-203ENST00000563226 SMAP1Q8IYB5 467 aaPredicted RBP20.9■□□□□ 0.94
SMPD3-203ENST00000563226 ANKRD35Q8N283 1001 aa20.9■□□□□ 0.94
SMPD3-203ENST00000563226 ANKRD13CQ8N6S4 541 aa20.9■□□□□ 0.94
SMPD3-203ENST00000563226 CEP112Q8N8E3 955 aa20.9■□□□□ 0.94
SMPD3-203ENST00000563226 CHST13Q8NET6 341 aa20.9■□□□□ 0.94
SMPD3-203ENST00000563226 ACCSQ96QU6 501 aa20.9■□□□□ 0.94
SMPD3-203ENST00000563226 KIFC3Q9BVG8 833 aa20.9■□□□□ 0.94
SMPD3-203ENST00000563226 SLC9A2Q9UBY0 812 aa20.9■□□□□ 0.94
SMPD3-203ENST00000563226 MYH9P35579 1960 aaKnown RBP20.89■□□□□ 0.94
SMPD3-203ENST00000563226 GTPBP10A4D1E9 387 aaKnown RBP20.89■□□□□ 0.93
SMPD3-203ENST00000563226 SRGAP2O75044 1071 aa20.89■□□□□ 0.93
SMPD3-203ENST00000563226 CLCN6P51797 869 aa20.89■□□□□ 0.93
SMPD3-203ENST00000563226 NCKAP1LP55160 1127 aa20.89■□□□□ 0.93
SMPD3-203ENST00000563226 ACTR2P61160 394 aa20.89■□□□□ 0.93
SMPD3-203ENST00000563226 GTF2BQ00403 316 aa20.89■□□□□ 0.93
SMPD3-203ENST00000563226 SPAG5Q96R06 1193 aa20.89■□□□□ 0.93
SMPD3-203ENST00000563226 R3HDMLQ9H3Y0 253 aa20.89■□□□□ 0.93
SMPD3-203ENST00000563226 TMEM206Q9H813 350 aa20.89■□□□□ 0.93
SMPD3-203ENST00000563226 ZNF446Q9NWS9 450 aa20.89■□□□□ 0.93
SMPD3-203ENST00000563226 A0A087X0T9 212 aa20.89■□□□□ 0.93
SMPD3-203ENST00000563226 PJA2O43164 708 aa20.89■□□□□ 0.93
SMPD3-203ENST00000563226 FAM228BP0C875 321 aa20.89■□□□□ 0.93
SMPD3-203ENST00000563226 IREB2P48200 963 aaKnown RBP20.89■□□□□ 0.93
SMPD3-203ENST00000563226 ALCAMQ13740 583 aa20.89■□□□□ 0.93
SMPD3-203ENST00000563226 WHAMMP3Q1A5X7 153 aa20.89■□□□□ 0.93
SMPD3-203ENST00000563226 PAPD7Q5XG87 772 aaKnown RBP20.89■□□□□ 0.93
SMPD3-203ENST00000563226 IQCEQ6IPM2 695 aa20.89■□□□□ 0.93
SMPD3-203ENST00000563226 BSNDQ8WZ55 320 aa20.89■□□□□ 0.93
SMPD3-203ENST00000563226 CDCA5Q96FF9 252 aa20.89■□□□□ 0.93
SMPD3-203ENST00000563226 TIPINQ9BVW5 301 aa20.89■□□□□ 0.93
SMPD3-203ENST00000563226 A0A0G2JLL6 359 aaPredicted RBP20.88■□□□□ 0.93
SMPD3-203ENST00000563226 PNMA6AP0CW24 399 aaPredicted RBP20.88■□□□□ 0.93
SMPD3-203ENST00000563226 JAM2P57087 298 aa20.88■□□□□ 0.93
SMPD3-203ENST00000563226 BFSP1Q12934 665 aa20.88■□□□□ 0.93
SMPD3-203ENST00000563226 ABHD15Q6UXT9 468 aa20.88■□□□□ 0.93
SMPD3-203ENST00000563226 PRRT2Q7Z6L0 340 aaPredicted RBP20.88■□□□□ 0.93
SMPD3-203ENST00000563226 ZNF526Q8TF50 670 aaPredicted RBP20.88■□□□□ 0.93
SMPD3-203ENST00000563226 CDHR1Q96JP9 859 aa20.88■□□□□ 0.93
SMPD3-203ENST00000563226 CEP170P1Q96L14 293 aa20.88■□□□□ 0.93
SMPD3-203ENST00000563226 ST6GALNAC4Q9H4F1 302 aa20.88■□□□□ 0.93
SMPD3-203ENST00000563226 STAM2O75886 525 aa20.87■□□□□ 0.93
SMPD3-203ENST00000563226 PSAPP07602 524 aa20.87■□□□□ 0.93
SMPD3-203ENST00000563226 DLG4P78352 724 aa20.87■□□□□ 0.93
SMPD3-203ENST00000563226 PTK2Q05397 1052 aa20.87■□□□□ 0.93
SMPD3-203ENST00000563226 SLC18A3Q16572 532 aa20.87■□□□□ 0.93
SMPD3-203ENST00000563226 GNPTABQ3T906 1256 aa20.87■□□□□ 0.93
SMPD3-203ENST00000563226 ZNF571Q7Z3V5 609 aaPredicted RBP20.87■□□□□ 0.93
SMPD3-203ENST00000563226 RIOX2Q8IUF8 465 aa20.87■□□□□ 0.93
SMPD3-203ENST00000563226 RABGGTAQ92696 567 aa20.87■□□□□ 0.93
SMPD3-203ENST00000563226 ATP6V0A1Q93050 837 aa20.87■□□□□ 0.93
SMPD3-203ENST00000563226 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.87■□□□□ 0.93
SMPD3-203ENST00000563226 ADAMTS1Q9UHI8 967 aa20.87■□□□□ 0.93
SMPD3-203ENST00000563226 NPTX2P47972 431 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms