RNA–Protein interactions for RNA: ENST00000560220.5

KNSTRN-209, Transcript of kinetochore localized astrin (SPAG5) binding protein, humanhuman

TSL 5

Gene KNSTRN, Length 903 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNSTRN-209ENST00000560220 CDK8P49336 464 aa11.8□□□□□ -0.52
KNSTRN-209ENST00000560220 NDUFA8P51970 172 aa11.8□□□□□ -0.52
KNSTRN-209ENST00000560220 BTG3Q14201 252 aaPredicted RBP11.8□□□□□ -0.52
KNSTRN-209ENST00000560220 CSRP2Q16527 193 aa11.8□□□□□ -0.52
KNSTRN-209ENST00000560220 DUSP28Q4G0W2 176 aa11.8□□□□□ -0.52
KNSTRN-209ENST00000560220 PLEKHG4Q58EX7 1191 aa11.8□□□□□ -0.52
KNSTRN-209ENST00000560220 FBXO16Q8IX29 292 aaPredicted RBP11.8□□□□□ -0.52
KNSTRN-209ENST00000560220 DRC7Q8IY82 874 aa11.8□□□□□ -0.52
KNSTRN-209ENST00000560220 FAM177A1Q8N128 213 aaPredicted RBP11.8□□□□□ -0.52
KNSTRN-209ENST00000560220 SPC24Q8NBT2 197 aa11.8□□□□□ -0.52
KNSTRN-209ENST00000560220 OR6J1Q8NGC5 347 aa11.8□□□□□ -0.52
KNSTRN-209ENST00000560220 MRFAP1L1Q96HT8 127 aa11.8□□□□□ -0.52
KNSTRN-209ENST00000560220 PRIMPOLQ96LW4 560 aa11.8□□□□□ -0.52
KNSTRN-209ENST00000560220 CCDC17Q96LX7 622 aa11.8□□□□□ -0.52
KNSTRN-209ENST00000560220 BPIFA3Q9BQP9 254 aa11.8□□□□□ -0.52
KNSTRN-209ENST00000560220 LSM14BQ9BX40 385 aaKnown RBP11.8□□□□□ -0.52
KNSTRN-209ENST00000560220 SLC26A6Q9BXS9 759 aa11.8□□□□□ -0.52
KNSTRN-209ENST00000560220 BRMS1Q9HCU9 246 aa11.8□□□□□ -0.52
KNSTRN-209ENST00000560220 CYP26B1Q9NR63 512 aa11.8□□□□□ -0.52
KNSTRN-209ENST00000560220 CA14Q9ULX7 337 aa11.8□□□□□ -0.52
KNSTRN-209ENST00000560220 RAI2Q9Y5P3 530 aa11.8□□□□□ -0.52
KNSTRN-209ENST00000560220 FOCADQ5VW36 1801 aa11.8□□□□□ -0.52
KNSTRN-209ENST00000560220 FAM237AA0A1B0GTK4 181 aa11.79□□□□□ -0.52
KNSTRN-209ENST00000560220 A0A1B0GVL5 298 aa11.79□□□□□ -0.52
KNSTRN-209ENST00000560220 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.79□□□□□ -0.52
KNSTRN-209ENST00000560220 BECN2A8MW95 431 aa11.79□□□□□ -0.52
KNSTRN-209ENST00000560220 FOXD2O60548 495 aaPredicted RBP11.79□□□□□ -0.52
KNSTRN-209ENST00000560220 RETP07949 1114 aa11.79□□□□□ -0.52
KNSTRN-209ENST00000560220 ZRSR1Q15695 479 aaKnown RBP11.79□□□□□ -0.52
KNSTRN-209ENST00000560220 DNTTIP2Q5QJE6 756 aaKnown RBP11.79□□□□□ -0.52
KNSTRN-209ENST00000560220 AXDND1Q5T1B0 1012 aaPredicted RBP11.79□□□□□ -0.52
KNSTRN-209ENST00000560220 LAIR1Q6GTX8 287 aa11.79□□□□□ -0.52
KNSTRN-209ENST00000560220 TRAF7Q6Q0C0 670 aa11.79□□□□□ -0.52
KNSTRN-209ENST00000560220 C11orf57Q6ZUT1 292 aaPredicted RBP11.79□□□□□ -0.52
KNSTRN-209ENST00000560220 ZNF605Q86T29 641 aa11.79□□□□□ -0.52
KNSTRN-209ENST00000560220 KLHL23Q8NBE8 558 aa11.79□□□□□ -0.52
KNSTRN-209ENST00000560220 NEDD1Q8NHV4 660 aa11.79□□□□□ -0.52
KNSTRN-209ENST00000560220 SEPT8Q92599 483 aa11.79□□□□□ -0.52
KNSTRN-209ENST00000560220 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.79□□□□□ -0.52
KNSTRN-209ENST00000560220 EHD4Q9H223 541 aa11.79□□□□□ -0.52
KNSTRN-209ENST00000560220 KCNF1Q9H3M0 494 aa11.79□□□□□ -0.52
KNSTRN-209ENST00000560220 SH2D4AQ9H788 454 aa11.79□□□□□ -0.52
KNSTRN-209ENST00000560220 VCPKMTQ9H867 229 aa11.79□□□□□ -0.52
KNSTRN-209ENST00000560220 SENP2Q9HC62 589 aa11.79□□□□□ -0.52
KNSTRN-209ENST00000560220 ARHGEF10LQ9HCE6 1279 aa11.79□□□□□ -0.52
KNSTRN-209ENST00000560220 SPATA6Q9NWH7 488 aaPredicted RBP11.79□□□□□ -0.52
KNSTRN-209ENST00000560220 KIAA1468Q9P260 1216 aa11.79□□□□□ -0.52
KNSTRN-209ENST00000560220 FBXO40Q9UH90 709 aa11.79□□□□□ -0.52
KNSTRN-209ENST00000560220 MYH1P12882 1939 aa11.79□□□□□ -0.52
KNSTRN-209ENST00000560220 DMXL2Q8TDJ6 3036 aa11.78□□□□□ -0.52
KNSTRN-209ENST00000560220 DYNC1I1O14576 645 aa11.78□□□□□ -0.52
KNSTRN-209ENST00000560220 PRPF3O43395 683 aaKnown RBP11.78□□□□□ -0.52
KNSTRN-209ENST00000560220 RRP9O43818 475 aaKnown RBP11.78□□□□□ -0.52
KNSTRN-209ENST00000560220 NEMFO60524 1076 aa11.78□□□□□ -0.52
KNSTRN-209ENST00000560220 CUTAO60888 179 aa11.78□□□□□ -0.52
KNSTRN-209ENST00000560220 ZNF202O95125 648 aa11.78□□□□□ -0.52
KNSTRN-209ENST00000560220 CYP2D6P10635 497 aa11.78□□□□□ -0.52
KNSTRN-209ENST00000560220 MTHFRP42898 656 aa11.78□□□□□ -0.52
KNSTRN-209ENST00000560220 TROAPQ12815 778 aa11.78□□□□□ -0.52
KNSTRN-209ENST00000560220 CCDC6Q16204 474 aa11.78□□□□□ -0.52
KNSTRN-209ENST00000560220 LPAL2Q16609 132 aa11.78□□□□□ -0.52
KNSTRN-209ENST00000560220 PHLDB3Q6NSJ2 640 aa11.78□□□□□ -0.52
KNSTRN-209ENST00000560220 LLGL2Q6P1M3 1020 aa11.78□□□□□ -0.52
KNSTRN-209ENST00000560220 CCDC186Q7Z3E2 898 aa11.78□□□□□ -0.52
KNSTRN-209ENST00000560220 CPXCR1Q8N123 301 aa11.78□□□□□ -0.52
KNSTRN-209ENST00000560220 SPATA18Q8TC71 538 aa11.78□□□□□ -0.52
KNSTRN-209ENST00000560220 PHKBQ93100 1093 aa11.78□□□□□ -0.52
KNSTRN-209ENST00000560220 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.78□□□□□ -0.52
KNSTRN-209ENST00000560220 GJB4Q9NTQ9 266 aa11.78□□□□□ -0.52
KNSTRN-209ENST00000560220 WASF3Q9UPY6 502 aa11.78□□□□□ -0.52
KNSTRN-209ENST00000560220 USTQ9Y2C2 406 aa11.78□□□□□ -0.52
KNSTRN-209ENST00000560220 TMX2Q9Y320 296 aa11.78□□□□□ -0.52
KNSTRN-209ENST00000560220 CNOT1A5YKK6 2376 aaKnown RBP11.78□□□□□ -0.52
KNSTRN-209ENST00000560220 CACNA1IQ9P0X4 2223 aa11.78□□□□□ -0.52
KNSTRN-209ENST00000560220 PRB1P04280 392 aa11.77□□□□□ -0.53
KNSTRN-209ENST00000560220 TOP1P11387 765 aaKnown RBP11.77□□□□□ -0.53
KNSTRN-209ENST00000560220 RXRAP19793 462 aa11.77□□□□□ -0.53
KNSTRN-209ENST00000560220 RASA1P20936 1047 aa11.77□□□□□ -0.53
KNSTRN-209ENST00000560220 SMARCA1P28370 1054 aa11.77□□□□□ -0.53
KNSTRN-209ENST00000560220 SHMT1P34896 483 aa11.77□□□□□ -0.53
KNSTRN-209ENST00000560220 LIMK1P53667 647 aa11.77□□□□□ -0.53
KNSTRN-209ENST00000560220 NLRP12P59046 1061 aa11.77□□□□□ -0.53
KNSTRN-209ENST00000560220 ITIH3Q06033 890 aa11.77□□□□□ -0.53
KNSTRN-209ENST00000560220 PTK7Q13308 1070 aa11.77□□□□□ -0.53
KNSTRN-209ENST00000560220 PTPAQ15257 358 aa11.77□□□□□ -0.53
KNSTRN-209ENST00000560220 PSAPL1Q6NUJ1 521 aa11.77□□□□□ -0.53
KNSTRN-209ENST00000560220 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.77□□□□□ -0.53
KNSTRN-209ENST00000560220 SESTD1Q86VW0 696 aa11.77□□□□□ -0.53
KNSTRN-209ENST00000560220 DHX40Q8IX18 779 aaKnown RBP11.77□□□□□ -0.53
KNSTRN-209ENST00000560220 PNMA1Q8ND90 353 aa11.77□□□□□ -0.53
KNSTRN-209ENST00000560220 AIFM3Q96NN9 605 aa11.77□□□□□ -0.53
KNSTRN-209ENST00000560220 MYL10Q9BUA6 226 aa11.77□□□□□ -0.53
KNSTRN-209ENST00000560220 SCNM1Q9BWG6 230 aa11.77□□□□□ -0.53
KNSTRN-209ENST00000560220 ADAM7Q9H2U9 754 aa11.77□□□□□ -0.53
KNSTRN-209ENST00000560220 VTA1Q9NP79 307 aa11.77□□□□□ -0.53
KNSTRN-209ENST00000560220 CLIP2Q9UDT6 1046 aa11.77□□□□□ -0.53
KNSTRN-209ENST00000560220 DBR1Q9UK59 544 aaKnown RBP11.77□□□□□ -0.53
KNSTRN-209ENST00000560220 PYCARDQ9ULZ3 195 aa11.77□□□□□ -0.53
KNSTRN-209ENST00000560220 CTDP1Q9Y5B0 961 aaPredicted RBP11.77□□□□□ -0.53
KNSTRN-209ENST00000560220 TEP1Q99973 2627 aaKnown RBP11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms