RNA–Protein interactions for RNA: ENST00000555808.1

TIMELESS-204, Transcript of timeless circadian regulator, humanhuman

TSL 3

Gene TIMELESS, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMELESS-204ENST00000555808 KRT17Q04695 432 aa8.63□□□□□ -1.03
TIMELESS-204ENST00000555808 FUT2Q10981 343 aa8.63□□□□□ -1.03
TIMELESS-204ENST00000555808 ST3GAL1Q11201 340 aa8.63□□□□□ -1.03
TIMELESS-204ENST00000555808 GRM4Q14833 912 aa8.63□□□□□ -1.03
TIMELESS-204ENST00000555808 WTAPQ15007 396 aa8.63□□□□□ -1.03
TIMELESS-204ENST00000555808 RSPO4Q2I0M5 234 aaPredicted RBP8.63□□□□□ -1.03
TIMELESS-204ENST00000555808 ATAT1Q5SQI0 421 aa8.63□□□□□ -1.03
TIMELESS-204ENST00000555808 ODR4Q5SWX8 454 aa8.63□□□□□ -1.03
TIMELESS-204ENST00000555808 IFIT1BQ5T764 474 aaKnown RBP8.63□□□□□ -1.03
TIMELESS-204ENST00000555808 KANK3Q6NY19 840 aa8.63□□□□□ -1.03
TIMELESS-204ENST00000555808 XRRA1Q6P2D8 792 aa8.63□□□□□ -1.03
TIMELESS-204ENST00000555808 APOA5Q6Q788 366 aa8.63□□□□□ -1.03
TIMELESS-204ENST00000555808 FAM43BQ6ZT52 329 aaPredicted RBP8.63□□□□□ -1.03
TIMELESS-204ENST00000555808 ZNF654Q8IZM8 581 aa8.63□□□□□ -1.03
TIMELESS-204ENST00000555808 SIX5Q8N196 739 aa8.63□□□□□ -1.03
TIMELESS-204ENST00000555808 DCLK2Q8N568 766 aa8.63□□□□□ -1.03
TIMELESS-204ENST00000555808 C12orf76Q8N812 135 aaPredicted RBP8.63□□□□□ -1.03
TIMELESS-204ENST00000555808 TRAPPC12Q8WVT3 735 aa8.63□□□□□ -1.03
TIMELESS-204ENST00000555808 RIN2Q8WYP3 895 aaPredicted RBP8.63□□□□□ -1.03
TIMELESS-204ENST00000555808 TNPO1Q92973 898 aaKnown RBP8.63□□□□□ -1.03
TIMELESS-204ENST00000555808 GPRASP2Q96D09 838 aa8.63□□□□□ -1.03
TIMELESS-204ENST00000555808 ZNF558Q96NG5 402 aa8.63□□□□□ -1.03
TIMELESS-204ENST00000555808 UBAC1Q9BSL1 405 aa8.63□□□□□ -1.03
TIMELESS-204ENST00000555808 RIOX1Q9H6W3 641 aa8.63□□□□□ -1.03
TIMELESS-204ENST00000555808 ATP6V0A4Q9HBG4 840 aa8.63□□□□□ -1.03
TIMELESS-204ENST00000555808 DZANK1Q9NVP4 752 aa8.63□□□□□ -1.03
TIMELESS-204ENST00000555808 TMEM161AQ9NX61 479 aa8.63□□□□□ -1.03
TIMELESS-204ENST00000555808 NOC2LQ9Y3T9 749 aaKnown RBP8.63□□□□□ -1.03
TIMELESS-204ENST00000555808 PDCD11Q14690 1871 aaKnown RBP8.63□□□□□ -1.03
TIMELESS-204ENST00000555808 NID2Q14112 1375 aa8.62□□□□□ -1.03
TIMELESS-204ENST00000555808 CHD6Q8TD26 2715 aa8.62□□□□□ -1.03
TIMELESS-204ENST00000555808 PNMA6FA0A0J9YX94 578 aa8.62□□□□□ -1.03
TIMELESS-204ENST00000555808 C2orf71A6NGG8 1288 aa8.62□□□□□ -1.03
TIMELESS-204ENST00000555808 PLEKHA8P1O95397 391 aa8.62□□□□□ -1.03
TIMELESS-204ENST00000555808 RFX1P22670 979 aa8.62□□□□□ -1.03
TIMELESS-204ENST00000555808 CDC27P30260 824 aa8.62□□□□□ -1.03
TIMELESS-204ENST00000555808 PBX3P40426 434 aa8.62□□□□□ -1.03
TIMELESS-204ENST00000555808 AK2P54819 239 aa8.62□□□□□ -1.03
TIMELESS-204ENST00000555808 PLCB4Q15147 1175 aa8.62□□□□□ -1.03
TIMELESS-204ENST00000555808 ZC3H14Q6PJT7 736 aaKnown RBP8.62□□□□□ -1.03
TIMELESS-204ENST00000555808 LRRC55Q6ZSA7 311 aa8.62□□□□□ -1.03
TIMELESS-204ENST00000555808 LRRC43Q8N309 656 aa8.62□□□□□ -1.03
TIMELESS-204ENST00000555808 NME8Q8N427 588 aa8.62□□□□□ -1.03
TIMELESS-204ENST00000555808 MRPL43Q8N983 215 aaKnown RBP8.62□□□□□ -1.03
TIMELESS-204ENST00000555808 SMARCC2Q8TAQ2 1214 aa8.62□□□□□ -1.03
TIMELESS-204ENST00000555808 BRF1Q92994 677 aa8.62□□□□□ -1.03
TIMELESS-204ENST00000555808 CDHR1Q96JP9 859 aa8.62□□□□□ -1.03
TIMELESS-204ENST00000555808 TMEM117Q9H0C3 514 aa8.62□□□□□ -1.03
TIMELESS-204ENST00000555808 ELAC1Q9H777 363 aaKnown RBP8.62□□□□□ -1.03
TIMELESS-204ENST00000555808 SPG21Q9NZD8 308 aa8.62□□□□□ -1.03
TIMELESS-204ENST00000555808 PKD2L1Q9P0L9 805 aa8.62□□□□□ -1.03
TIMELESS-204ENST00000555808 GINS2Q9Y248 185 aa8.62□□□□□ -1.03
TIMELESS-204ENST00000555808 DOCK6Q96HP0 2047 aa8.62□□□□□ -1.03
TIMELESS-204ENST00000555808 CFAP47Q6ZTR5 3102 aa8.62□□□□□ -1.03
TIMELESS-204ENST00000555808 USP24Q9UPU5 2620 aa8.61□□□□□ -1.03
TIMELESS-204ENST00000555808 KLF18A0A0U1RQI7 1052 aa8.61□□□□□ -1.03
TIMELESS-204ENST00000555808 GPR182O15218 404 aa8.61□□□□□ -1.03
TIMELESS-204ENST00000555808 HOXA2O43364 376 aa8.61□□□□□ -1.03
TIMELESS-204ENST00000555808 NARSO43776 548 aaKnown RBP8.61□□□□□ -1.03
TIMELESS-204ENST00000555808 CXCL14O95715 111 aa8.61□□□□□ -1.03
TIMELESS-204ENST00000555808 CFHP08603 1231 aa8.61□□□□□ -1.03
TIMELESS-204ENST00000555808 HMGB1P09429 215 aaKnown RBP8.61□□□□□ -1.03
TIMELESS-204ENST00000555808 EPCAMP16422 314 aa8.61□□□□□ -1.03
TIMELESS-204ENST00000555808 PSMA5P28066 241 aa8.61□□□□□ -1.03
TIMELESS-204ENST00000555808 PDIA3P30101 505 aaKnown RBP8.61□□□□□ -1.03
TIMELESS-204ENST00000555808 ST3GAL2Q16842 350 aa8.61□□□□□ -1.03
TIMELESS-204ENST00000555808 USP17L6PQ6QN14 398 aa8.61□□□□□ -1.03
TIMELESS-204ENST00000555808 MTHFD1LQ6UB35 978 aa8.61□□□□□ -1.03
TIMELESS-204ENST00000555808 CCDC149Q6ZUS6 474 aa8.61□□□□□ -1.03
TIMELESS-204ENST00000555808 OTOP3Q7RTS5 596 aa8.61□□□□□ -1.03
TIMELESS-204ENST00000555808 ABI1Q8IZP0 508 aa8.61□□□□□ -1.03
TIMELESS-204ENST00000555808 CMTR1Q8N1G2 835 aaKnown RBP8.61□□□□□ -1.03
TIMELESS-204ENST00000555808 SRBD1Q8N5C6 995 aaKnown RBP8.61□□□□□ -1.03
TIMELESS-204ENST00000555808 TMEM40Q8WWA1 233 aa8.61□□□□□ -1.03
TIMELESS-204ENST00000555808 CUL5Q93034 780 aa8.61□□□□□ -1.03
TIMELESS-204ENST00000555808 CASD1Q96PB1 797 aa8.61□□□□□ -1.03
TIMELESS-204ENST00000555808 PCYT2Q99447 389 aa8.61□□□□□ -1.03
TIMELESS-204ENST00000555808 AZI2Q9H6S1 392 aa8.61□□□□□ -1.03
TIMELESS-204ENST00000555808 KCNK12Q9HB15 430 aa8.61□□□□□ -1.03
TIMELESS-204ENST00000555808 CDHR5Q9HBB8 845 aa8.61□□□□□ -1.03
TIMELESS-204ENST00000555808 PDRG1Q9NUG6 133 aa8.61□□□□□ -1.03
TIMELESS-204ENST00000555808 TPCN1Q9ULQ1 816 aa8.61□□□□□ -1.03
TIMELESS-204ENST00000555808 ST3GAL5Q9UNP4 418 aa8.61□□□□□ -1.03
TIMELESS-204ENST00000555808 CYP46A1Q9Y6A2 500 aa8.61□□□□□ -1.03
TIMELESS-204ENST00000555808 ACACBO00763 2458 aa8.61□□□□□ -1.03
TIMELESS-204ENST00000555808 COL4A3Q01955 1670 aa8.6□□□□□ -1.03
TIMELESS-204ENST00000555808 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.6□□□□□ -1.03
TIMELESS-204ENST00000555808 KRBA1A5PL33 1030 aa8.6□□□□□ -1.03
TIMELESS-204ENST00000555808 MEIS2O14770 477 aa8.6□□□□□ -1.03
TIMELESS-204ENST00000555808 DDAH1O94760 285 aa8.6□□□□□ -1.03
TIMELESS-204ENST00000555808 SP9P0CG40 484 aa8.6□□□□□ -1.03
TIMELESS-204ENST00000555808 SDHBP21912 280 aa8.6□□□□□ -1.03
TIMELESS-204ENST00000555808 ADD1P35611 737 aaKnown RBP8.6□□□□□ -1.03
TIMELESS-204ENST00000555808 NEK4P51957 841 aa8.6□□□□□ -1.03
TIMELESS-204ENST00000555808 FAM189BP81408 668 aa8.6□□□□□ -1.03
TIMELESS-204ENST00000555808 TBC1D8BQ0IIM8 1120 aa8.6□□□□□ -1.03
TIMELESS-204ENST00000555808 MTMR1Q13613 665 aa8.6□□□□□ -1.03
TIMELESS-204ENST00000555808 BMS1Q14692 1282 aaKnown RBP8.6□□□□□ -1.03
TIMELESS-204ENST00000555808 NTRK3Q16288 839 aa8.6□□□□□ -1.03
TIMELESS-204ENST00000555808 SPECC1Q5M775 1068 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms