RNA–Protein interactions for RNA: ENST00000551920.1

GCN1-209, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-209ENST00000551920 DGAT1O75907 488 aa18.22■□□□□ 0.51
GCN1-209ENST00000551920 ACTN1P12814 892 aa18.22■□□□□ 0.51
GCN1-209ENST00000551920 ZRSR1Q15695 479 aaKnown RBP18.22■□□□□ 0.51
GCN1-209ENST00000551920 PADI6Q6TGC4 694 aa18.22■□□□□ 0.51
GCN1-209ENST00000551920 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.22■□□□□ 0.51
GCN1-209ENST00000551920 TMCO2Q7Z6W1 182 aaPredicted RBP18.22■□□□□ 0.51
GCN1-209ENST00000551920 CABP7Q86V35 215 aa18.22■□□□□ 0.51
GCN1-209ENST00000551920 FAM228AQ86W67 206 aa18.22■□□□□ 0.51
GCN1-209ENST00000551920 RHPN2Q8IUC4 686 aa18.22■□□□□ 0.51
GCN1-209ENST00000551920 ASAP3Q8TDY4 903 aa18.22■□□□□ 0.51
GCN1-209ENST00000551920 PRPF31Q8WWY3 499 aaKnown RBP18.22■□□□□ 0.51
GCN1-209ENST00000551920 LRCH3Q96II8 777 aa18.22■□□□□ 0.51
GCN1-209ENST00000551920 EPSTI1Q96J88 318 aa18.22■□□□□ 0.51
GCN1-209ENST00000551920 CCDC43Q96MW1 224 aaKnown RBP18.22■□□□□ 0.51
GCN1-209ENST00000551920 JPH2Q9BR39 696 aaPredicted RBP18.22■□□□□ 0.51
GCN1-209ENST00000551920 TMX1Q9H3N1 280 aa18.22■□□□□ 0.51
GCN1-209ENST00000551920 ERVK-5Q9HDB9 667 aa18.22■□□□□ 0.51
GCN1-209ENST00000551920 PADI3Q9ULW8 664 aa18.22■□□□□ 0.51
GCN1-209ENST00000551920 COL4A3BPQ9Y5P4 624 aa18.22■□□□□ 0.51
GCN1-209ENST00000551920 SQORQ9Y6N5 450 aa18.22■□□□□ 0.51
GCN1-209ENST00000551920 ABHD14A-ACY1A0A1B0GW23 586 aa18.21■□□□□ 0.51
GCN1-209ENST00000551920 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.21■□□□□ 0.51
GCN1-209ENST00000551920 ARHGEF35A5YM69 484 aa18.21■□□□□ 0.51
GCN1-209ENST00000551920 GAS2O43903 313 aaKnown RBP18.21■□□□□ 0.51
GCN1-209ENST00000551920 CSDE1O75534 798 aaKnown RBP18.21■□□□□ 0.51
GCN1-209ENST00000551920 YEATS4O95619 227 aa18.21■□□□□ 0.51
GCN1-209ENST00000551920 DARSP14868 501 aaKnown RBP18.21■□□□□ 0.51
GCN1-209ENST00000551920 DNM2P50570 870 aa18.21■□□□□ 0.51
GCN1-209ENST00000551920 KARSQ15046 597 aaKnown RBP18.21■□□□□ 0.51
GCN1-209ENST00000551920 STK38Q15208 465 aa18.21■□□□□ 0.51
GCN1-209ENST00000551920 USP38Q8NB14 1042 aa18.21■□□□□ 0.51
GCN1-209ENST00000551920 PSPC1Q8WXF1 523 aaKnown RBP18.21■□□□□ 0.51
GCN1-209ENST00000551920 NLRP4Q96MN2 994 aa18.21■□□□□ 0.51
GCN1-209ENST00000551920 MTIF3Q9H2K0 278 aaKnown RBP18.21■□□□□ 0.51
GCN1-209ENST00000551920 SLC4A7Q9Y6M7 1214 aa18.21■□□□□ 0.51
GCN1-209ENST00000551920 A0A087WZ62 844 aa18.2■□□□□ 0.5
GCN1-209ENST00000551920 SPTLC2O15270 562 aa18.2■□□□□ 0.5
GCN1-209ENST00000551920 EYA4O95677 639 aa18.2■□□□□ 0.5
GCN1-209ENST00000551920 ATP2A2P16615 1042 aaKnown RBP18.2■□□□□ 0.5
GCN1-209ENST00000551920 PLCG1P19174 1290 aa18.2■□□□□ 0.5
GCN1-209ENST00000551920 ARL2P36404 184 aa18.2■□□□□ 0.5
GCN1-209ENST00000551920 LAMTOR4Q0VGL1 99 aa18.2■□□□□ 0.5
GCN1-209ENST00000551920 PAK2Q13177 524 aa18.2■□□□□ 0.5
GCN1-209ENST00000551920 IKBKEQ14164 716 aa18.2■□□□□ 0.5
GCN1-209ENST00000551920 MAEAQ7L5Y9 396 aa18.2■□□□□ 0.5
GCN1-209ENST00000551920 EXOC8Q8IYI6 725 aa18.2■□□□□ 0.5
GCN1-209ENST00000551920 KRI1Q8N9T8 703 aaKnown RBP18.2■□□□□ 0.5
GCN1-209ENST00000551920 NLRP7Q8WX94 980 aa18.2■□□□□ 0.5
GCN1-209ENST00000551920 SYMPKQ92797 1274 aaKnown RBP18.2■□□□□ 0.5
GCN1-209ENST00000551920 APBB2Q92870 758 aa18.2■□□□□ 0.5
GCN1-209ENST00000551920 SCLT1Q96NL6 688 aa18.2■□□□□ 0.5
GCN1-209ENST00000551920 FDXACB1Q9BRP7 624 aaPredicted RBP18.2■□□□□ 0.5
GCN1-209ENST00000551920 RUSC1Q9BVN2 902 aa18.2■□□□□ 0.5
GCN1-209ENST00000551920 POLR3FQ9H1D9 316 aaPredicted RBP18.2■□□□□ 0.5
GCN1-209ENST00000551920 IFT122Q9HBG6 1241 aa18.2■□□□□ 0.5
GCN1-209ENST00000551920 MICAL3Q7RTP6 2002 aa18.2■□□□□ 0.5
GCN1-209ENST00000551920 MGEA5O60502 916 aa18.19■□□□□ 0.5
GCN1-209ENST00000551920 RPS6KA5O75582 802 aa18.19■□□□□ 0.5
GCN1-209ENST00000551920 CYP11B2P19099 503 aa18.19■□□□□ 0.5
GCN1-209ENST00000551920 FGFR4P22455 802 aa18.19■□□□□ 0.5
GCN1-209ENST00000551920 GLRA2P23416 452 aa18.19■□□□□ 0.5
GCN1-209ENST00000551920 EIF4BP23588 611 aaKnown RBP18.19■□□□□ 0.5
GCN1-209ENST00000551920 PBX2P40425 430 aa18.19■□□□□ 0.5
GCN1-209ENST00000551920 UBA7P41226 1012 aa18.19■□□□□ 0.5
GCN1-209ENST00000551920 CAPSQ13938 189 aa18.19■□□□□ 0.5
GCN1-209ENST00000551920 ZNF410Q86VK4 478 aa18.19■□□□□ 0.5
GCN1-209ENST00000551920 TCP11Q8WWU5 503 aa18.19■□□□□ 0.5
GCN1-209ENST00000551920 BSNDQ8WZ55 320 aa18.19■□□□□ 0.5
GCN1-209ENST00000551920 CCSER1Q9C0I3 900 aa18.19■□□□□ 0.5
GCN1-209ENST00000551920 BLOC1S4Q9NUP1 217 aa18.19■□□□□ 0.5
GCN1-209ENST00000551920 ST3GAL5Q9UNP4 418 aa18.19■□□□□ 0.5
GCN1-209ENST00000551920 DNM3Q9UQ16 869 aa18.19■□□□□ 0.5
GCN1-209ENST00000551920 CHD7Q9P2D1 2997 aa18.19■□□□□ 0.5
GCN1-209ENST00000551920 LOXHD1Q8IVV2 1947 aa18.19■□□□□ 0.5
GCN1-209ENST00000551920 A0A087X0B3 334 aa18.18■□□□□ 0.5
GCN1-209ENST00000551920 SLC26A4O43511 780 aa18.18■□□□□ 0.5
GCN1-209ENST00000551920 PPP6R2O75170 966 aa18.18■□□□□ 0.5
GCN1-209ENST00000551920 RABGGTBP53611 331 aa18.18■□□□□ 0.5
GCN1-209ENST00000551920 SLC12A3P55017 1021 aa18.18■□□□□ 0.5
GCN1-209ENST00000551920 SMAD3P84022 425 aaKnown RBP18.18■□□□□ 0.5
GCN1-209ENST00000551920 AXDND1Q5T1B0 1012 aaPredicted RBP18.18■□□□□ 0.5
GCN1-209ENST00000551920 RTN4RL1Q86UN2 441 aaPredicted RBP18.18■□□□□ 0.5
GCN1-209ENST00000551920 ZNF710Q8N1W2 664 aa18.18■□□□□ 0.5
GCN1-209ENST00000551920 MCPH1Q8NEM0 835 aa18.18■□□□□ 0.5
GCN1-209ENST00000551920 CDK5RAP3Q96JB5 506 aa18.18■□□□□ 0.5
GCN1-209ENST00000551920 SLC9A7Q96T83 725 aa18.18■□□□□ 0.5
GCN1-209ENST00000551920 PBX4Q9BYU1 374 aa18.18■□□□□ 0.5
GCN1-209ENST00000551920 NT5C3AQ9H0P0 336 aa18.18■□□□□ 0.5
GCN1-209ENST00000551920 MINDY3Q9H8M7 445 aa18.18■□□□□ 0.5
GCN1-209ENST00000551920 POLD4Q9HCU8 107 aa18.18■□□□□ 0.5
GCN1-209ENST00000551920 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.17■□□□□ 0.5
GCN1-209ENST00000551920 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.17■□□□□ 0.5
GCN1-209ENST00000551920 EFCAB14O75071 495 aa18.17■□□□□ 0.5
GCN1-209ENST00000551920 SRGAP2CP0DJJ0 459 aa18.17■□□□□ 0.5
GCN1-209ENST00000551920 KCNJ6P48051 423 aa18.17■□□□□ 0.5
GCN1-209ENST00000551920 NFX1Q12986 1120 aaKnown RBP18.17■□□□□ 0.5
GCN1-209ENST00000551920 MAPK7Q13164 816 aa18.17■□□□□ 0.5
GCN1-209ENST00000551920 ATL3Q6DD88 541 aa18.17■□□□□ 0.5
GCN1-209ENST00000551920 HERC6Q8IVU3 1022 aa18.17■□□□□ 0.5
GCN1-209ENST00000551920 DAW1Q8N136 415 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms