RNA–Protein interactions for RNA: ENST00000543324.1

CIT-213, Transcript of citron rho-interacting serine/threonine kinase, human

TSL 3

Gene CIT, Length 497 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIT-213	ENST00000543324	USH1G	Q495M9	461 aa		7.39	□□□□□ -1.23
CIT-213	ENST00000543324	TPRN	Q4KMQ1	711 aa		7.39	□□□□□ -1.23
CIT-213	ENST00000543324	IFIT1B	Q5T764	474 aa	Known RBP	7.39	□□□□□ -1.23
CIT-213	ENST00000543324	GDF6	Q6KF10	455 aa	Predicted RBP	7.39	□□□□□ -1.23
CIT-213	ENST00000543324	KIAA1211L	Q6NV74	962 aa		7.39	□□□□□ -1.23
CIT-213	ENST00000543324	XRRA1	Q6P2D8	792 aa		7.39	□□□□□ -1.23
CIT-213	ENST00000543324	SESTD1	Q86VW0	696 aa		7.39	□□□□□ -1.23
CIT-213	ENST00000543324	SAMD3	Q8N6K7	520 aa		7.39	□□□□□ -1.23
CIT-213	ENST00000543324	C12orf50	Q8NA57	414 aa	Predicted RBP	7.39	□□□□□ -1.23
CIT-213	ENST00000543324	IGDCC4	Q8TDY8	1250 aa		7.39	□□□□□ -1.23
CIT-213	ENST00000543324	SCFD2	Q8WU76	684 aa		7.39	□□□□□ -1.23
CIT-213	ENST00000543324	RUFY2	Q8WXA3	655 aa		7.39	□□□□□ -1.23
CIT-213	ENST00000543324	SNX21	Q969T3	373 aa		7.39	□□□□□ -1.23
CIT-213	ENST00000543324	EMID1	Q96A84	441 aa	Predicted RBP	7.39	□□□□□ -1.23
CIT-213	ENST00000543324	CRELD1	Q96HD1	420 aa		7.39	□□□□□ -1.23
CIT-213	ENST00000543324	IWS1	Q96ST2	819 aa		7.39	□□□□□ -1.23
CIT-213	ENST00000543324	MAP3K14	Q99558	947 aa		7.39	□□□□□ -1.23
CIT-213	ENST00000543324	UBAC1	Q9BSL1	405 aa		7.39	□□□□□ -1.23
CIT-213	ENST00000543324	MTA3	Q9BTC8	594 aa		7.39	□□□□□ -1.23
CIT-213	ENST00000543324	MKNK1	Q9BUB5	465 aa		7.39	□□□□□ -1.23
CIT-213	ENST00000543324	BCO2	Q9BYV7	579 aa		7.39	□□□□□ -1.23
CIT-213	ENST00000543324	LSG1	Q9H089	658 aa	Known RBP	7.39	□□□□□ -1.23
CIT-213	ENST00000543324	MAP3K20	Q9NYL2	800 aa	Known RBP	7.39	□□□□□ -1.23
CIT-213	ENST00000543324	IGSF9	Q9P2J2	1179 aa		7.39	□□□□□ -1.23
CIT-213	ENST00000543324	CAPN8	A6NHC0	703 aa		7.38	□□□□□ -1.23
CIT-213	ENST00000543324	KLRF2	D3W0D1	207 aa		7.38	□□□□□ -1.23
CIT-213	ENST00000543324	ZBTB5	O15062	677 aa		7.38	□□□□□ -1.23
CIT-213	ENST00000543324	CPT1A	P50416	773 aa		7.38	□□□□□ -1.23
CIT-213	ENST00000543324	CCDC173	Q0VFZ6	552 aa		7.38	□□□□□ -1.23
CIT-213	ENST00000543324	PPP2R5B	Q15173	497 aa		7.38	□□□□□ -1.23
CIT-213	ENST00000543324	TRIM71	Q2Q1W2	868 aa	Known RBP	7.38	□□□□□ -1.23
CIT-213	ENST00000543324	HS1BP3	Q53T59	392 aa		7.38	□□□□□ -1.23
CIT-213	ENST00000543324	ZNF618	Q5T7W0	954 aa		7.38	□□□□□ -1.23
CIT-213	ENST00000543324	KIAA1841	Q6NSI8	718 aa		7.38	□□□□□ -1.23
CIT-213	ENST00000543324	KIAA1211	Q6ZU35	1233 aa		7.38	□□□□□ -1.23
CIT-213	ENST00000543324	NSUN6	Q8TEA1	469 aa	Known RBP	7.38	□□□□□ -1.23
CIT-213	ENST00000543324	ACSF2	Q96CM8	615 aa	Predicted RBP	7.38	□□□□□ -1.23
CIT-213	ENST00000543324	ZNF689	Q96CS4	500 aa	Predicted RBP	7.38	□□□□□ -1.23
CIT-213	ENST00000543324	TAAR1	Q96RJ0	339 aa		7.38	□□□□□ -1.23
CIT-213	ENST00000543324	PANK2	Q9BZ23	570 aa		7.38	□□□□□ -1.23
CIT-213	ENST00000543324	LY9	Q9HBG7	655 aa		7.38	□□□□□ -1.23
CIT-213	ENST00000543324	GPHN	Q9NQX3	736 aa	Predicted RBP	7.38	□□□□□ -1.23
CIT-213	ENST00000543324	PXMP2	Q9NR77	195 aa		7.38	□□□□□ -1.23
CIT-213	ENST00000543324	DBR1	Q9UK59	544 aa	Known RBP	7.38	□□□□□ -1.23
CIT-213	ENST00000543324	MRPL11	Q9Y3B7	192 aa	Known RBP	7.38	□□□□□ -1.23
CIT-213	ENST00000543324	RBM8A	Q9Y5S9	174 aa	Known RBP	7.38	□□□□□ -1.23
CIT-213	ENST00000543324	HAS3	O00219	553 aa		7.37	□□□□□ -1.23
CIT-213	ENST00000543324	LILRB3	O75022	631 aa		7.37	□□□□□ -1.23
CIT-213	ENST00000543324	OFD1	O75665	1012 aa		7.37	□□□□□ -1.23
CIT-213	ENST00000543324	F2	P00734	622 aa		7.37	□□□□□ -1.23
CIT-213	ENST00000543324	WEE2	P0C1S8	567 aa		7.37	□□□□□ -1.23
CIT-213	ENST00000543324	ZNF806	P0C7X5	589 aa		7.37	□□□□□ -1.23
CIT-213	ENST00000543324	SRF	P11831	508 aa		7.37	□□□□□ -1.23
CIT-213	ENST00000543324	TDGF1	P13385	188 aa		7.37	□□□□□ -1.23
CIT-213	ENST00000543324	CEACAM1	P13688	526 aa		7.37	□□□□□ -1.23
CIT-213	ENST00000543324	SMARCA1	P28370	1054 aa		7.37	□□□□□ -1.23
CIT-213	ENST00000543324	HOXC8	P31273	242 aa		7.37	□□□□□ -1.23
CIT-213	ENST00000543324	MAGEA9	P43362	315 aa		7.37	□□□□□ -1.23
CIT-213	ENST00000543324	STARD6	P59095	220 aa		7.37	□□□□□ -1.23
CIT-213	ENST00000543324	PDE4D	Q08499	809 aa		7.37	□□□□□ -1.23
CIT-213	ENST00000543324	SCAP	Q12770	1279 aa		7.37	□□□□□ -1.23
CIT-213	ENST00000543324	BTG3	Q14201	252 aa	Predicted RBP	7.37	□□□□□ -1.23
CIT-213	ENST00000543324	NECTIN1	Q15223	517 aa		7.37	□□□□□ -1.23
CIT-213	ENST00000543324	BMP2KL	Q5H9B9	411 aa		7.37	□□□□□ -1.23
CIT-213	ENST00000543324	SH3PXD2A	Q5TCZ1	1133 aa		7.37	□□□□□ -1.23
CIT-213	ENST00000543324	LLGL2	Q6P1M3	1020 aa		7.37	□□□□□ -1.23
CIT-213	ENST00000543324	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	7.37	□□□□□ -1.23
CIT-213	ENST00000543324	CLEC17A	Q6ZS10	378 aa		7.37	□□□□□ -1.23
CIT-213	ENST00000543324	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	7.37	□□□□□ -1.23
CIT-213	ENST00000543324	MTERF4	Q7Z6M4	381 aa	Known RBP	7.37	□□□□□ -1.23
CIT-213	ENST00000543324	MCF2L2	Q86YR7	1114 aa		7.37	□□□□□ -1.23
CIT-213	ENST00000543324	OR6J1	Q8NGC5	347 aa		7.37	□□□□□ -1.23
CIT-213	ENST00000543324	NCOA7	Q8NI08	942 aa		7.37	□□□□□ -1.23
CIT-213	ENST00000543324	IL31RA	Q8NI17	732 aa		7.37	□□□□□ -1.23
CIT-213	ENST00000543324	GPR152	Q8TDT2	470 aa		7.37	□□□□□ -1.23
CIT-213	ENST00000543324	SPIRE2	Q8WWL2	714 aa		7.37	□□□□□ -1.23
CIT-213	ENST00000543324	KAT2B	Q92831	832 aa		7.37	□□□□□ -1.23
CIT-213	ENST00000543324	COPS5	Q92905	334 aa		7.37	□□□□□ -1.23
CIT-213	ENST00000543324	RMDN3	Q96TC7	470 aa		7.37	□□□□□ -1.23
CIT-213	ENST00000543324	PDCD2L	Q9BRP1	358 aa		7.37	□□□□□ -1.23
CIT-213	ENST00000543324	ESYT1	Q9BSJ8	1104 aa		7.37	□□□□□ -1.23
CIT-213	ENST00000543324	SPZ1	Q9BXG8	430 aa		7.37	□□□□□ -1.23
CIT-213	ENST00000543324	AMN	Q9BXJ7	453 aa		7.37	□□□□□ -1.23
CIT-213	ENST00000543324	BCAS3	Q9H6U6	928 aa		7.37	□□□□□ -1.23
CIT-213	ENST00000543324	MRPL42	Q9Y6G3	142 aa	Known RBP	7.37	□□□□□ -1.23
CIT-213	ENST00000543324	ATM	Q13315	3056 aa		7.37	□□□□□ -1.23
CIT-213	ENST00000543324	URB1	O60287	2271 aa	Known RBP	7.36	□□□□□ -1.23
CIT-213	ENST00000543324	NF1	P21359	2839 aa		7.36	□□□□□ -1.23
CIT-213	ENST00000543324		B4DLN1	442 aa		7.36	□□□□□ -1.23
CIT-213	ENST00000543324	SH2B2	O14492	632 aa	Predicted RBP	7.36	□□□□□ -1.23
CIT-213	ENST00000543324	TREH	O43280	583 aa		7.36	□□□□□ -1.23
CIT-213	ENST00000543324	KPNA6	O60684	536 aa		7.36	□□□□□ -1.23
CIT-213	ENST00000543324	DDAH1	O94760	285 aa		7.36	□□□□□ -1.23
CIT-213	ENST00000543324	NR3C2	P08235	984 aa		7.36	□□□□□ -1.23
CIT-213	ENST00000543324	TXN	P10599	105 aa	Known RBP	7.36	□□□□□ -1.23
CIT-213	ENST00000543324	GP1BB	P13224	206 aa		7.36	□□□□□ -1.23
CIT-213	ENST00000543324	POU3F2	P20265	443 aa	Predicted RBP	7.36	□□□□□ -1.23
CIT-213	ENST00000543324	MRPL12	P52815	198 aa	Known RBP	7.36	□□□□□ -1.23
CIT-213	ENST00000543324	UBE3A	Q05086	875 aa		7.36	□□□□□ -1.23
CIT-213	ENST00000543324	PGM5	Q15124	567 aa		7.36	□□□□□ -1.23

Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms