RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, human

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKDC-208	ENST00000536710	IFT122	Q9HBG6	1241 aa		7	□□□□□ -1.29
PRKDC-208	ENST00000536710	DCP1A	Q9NPI6	582 aa	Predicted RBP	7	□□□□□ -1.29
PRKDC-208	ENST00000536710	ZFP69B	Q9UJL9	534 aa		7	□□□□□ -1.29
PRKDC-208	ENST00000536710	RCAN3	Q9UKA8	241 aa		7	□□□□□ -1.29
PRKDC-208	ENST00000536710	WASF3	Q9UPY6	502 aa		7	□□□□□ -1.29
PRKDC-208	ENST00000536710	ZNF503-AS2	A6NEH8	195 aa		6.99	□□□□□ -1.29
PRKDC-208	ENST00000536710	PAPLN	O95428	1278 aa		6.99	□□□□□ -1.29
PRKDC-208	ENST00000536710	PFKM	P08237	780 aa		6.99	□□□□□ -1.29
PRKDC-208	ENST00000536710	GTF2H3	Q13889	308 aa		6.99	□□□□□ -1.29
PRKDC-208	ENST00000536710	UAP1L1	Q3KQV9	507 aa		6.99	□□□□□ -1.29
PRKDC-208	ENST00000536710	ARHGAP29	Q52LW3	1261 aa		6.99	□□□□□ -1.29
PRKDC-208	ENST00000536710	RRP12	Q5JTH9	1297 aa	Known RBP	6.99	□□□□□ -1.29
PRKDC-208	ENST00000536710	NBPF11	Q86T75	865 aa		6.99	□□□□□ -1.29
PRKDC-208	ENST00000536710	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	6.99	□□□□□ -1.29
PRKDC-208	ENST00000536710	CLIC6	Q96NY7	704 aa		6.99	□□□□□ -1.29
PRKDC-208	ENST00000536710	ACE2	Q9BYF1	805 aa	Predicted RBP	6.99	□□□□□ -1.29
PRKDC-208	ENST00000536710	FTSJ1	Q9UET6	329 aa		6.99	□□□□□ -1.29
PRKDC-208	ENST00000536710	PRSS50	Q9UI38	385 aa		6.99	□□□□□ -1.29
PRKDC-208	ENST00000536710	TMPRSS11E	Q9UL52	423 aa		6.99	□□□□□ -1.29
PRKDC-208	ENST00000536710	PCDHB6	Q9Y5E3	794 aa		6.99	□□□□□ -1.29
PRKDC-208	ENST00000536710	AP1G1	O43747	822 aa		6.98	□□□□□ -1.29
PRKDC-208	ENST00000536710	OPHN1	O60890	802 aa		6.98	□□□□□ -1.29
PRKDC-208	ENST00000536710	ATF2	P15336	505 aa		6.98	□□□□□ -1.29
PRKDC-208	ENST00000536710	HSPA6	P17066	643 aa		6.98	□□□□□ -1.29
PRKDC-208	ENST00000536710	FBLN1	P23142	703 aa		6.98	□□□□□ -1.29
PRKDC-208	ENST00000536710	IL13RA1	P78552	427 aa		6.98	□□□□□ -1.29
PRKDC-208	ENST00000536710	NFATC3	Q12968	1075 aa		6.98	□□□□□ -1.29
PRKDC-208	ENST00000536710	WDR72	Q3MJ13	1102 aa		6.98	□□□□□ -1.29
PRKDC-208	ENST00000536710	CCSAP	Q6IQ19	270 aa	Predicted RBP	6.98	□□□□□ -1.29
PRKDC-208	ENST00000536710	PPP4R4	Q6NUP7	873 aa		6.98	□□□□□ -1.29
PRKDC-208	ENST00000536710	DPP8	Q6V1X1	898 aa	Predicted RBP	6.98	□□□□□ -1.29
PRKDC-208	ENST00000536710	KSR2	Q6VAB6	950 aa		6.98	□□□□□ -1.29
PRKDC-208	ENST00000536710	EPM2AIP1	Q7L775	607 aa	Predicted RBP	6.98	□□□□□ -1.29
PRKDC-208	ENST00000536710	STPG3	Q8N7X2	389 aa		6.98	□□□□□ -1.29
PRKDC-208	ENST00000536710	CDYL2	Q8N8U2	506 aa		6.98	□□□□□ -1.29
PRKDC-208	ENST00000536710	GAB3	Q8WWW8	586 aa		6.98	□□□□□ -1.29
PRKDC-208	ENST00000536710	RSAD2	Q8WXG1	361 aa		6.98	□□□□□ -1.29
PRKDC-208	ENST00000536710	AIFM3	Q96NN9	605 aa		6.98	□□□□□ -1.29
PRKDC-208	ENST00000536710	CNTD2	Q9H8S5	307 aa		6.98	□□□□□ -1.29
PRKDC-208	ENST00000536710	NMRK2	Q9NPI5	230 aa		6.98	□□□□□ -1.29
PRKDC-208	ENST00000536710	ANLN	Q9NQW6	1124 aa		6.98	□□□□□ -1.29
PRKDC-208	ENST00000536710	CROT	Q9UKG9	612 aa		6.98	□□□□□ -1.29
PRKDC-208	ENST00000536710	DENND2A	Q9ULE3	1009 aa		6.98	□□□□□ -1.29
PRKDC-208	ENST00000536710	IQCJ-SCHIP1	C9J366	451 aa	Predicted RBP	6.97	□□□□□ -1.29
PRKDC-208	ENST00000536710	PLIN1	O60240	522 aa		6.97	□□□□□ -1.29
PRKDC-208	ENST00000536710	OFD1	O75665	1012 aa		6.97	□□□□□ -1.29
PRKDC-208	ENST00000536710	CELA3B	P08861	270 aa		6.97	□□□□□ -1.29
PRKDC-208	ENST00000536710	LPO	P22079	712 aa	Predicted RBP	6.97	□□□□□ -1.29
PRKDC-208	ENST00000536710	XPA	P23025	273 aa	Predicted RBP	6.97	□□□□□ -1.29
PRKDC-208	ENST00000536710	CDR1	P51861	262 aa		6.97	□□□□□ -1.29
PRKDC-208	ENST00000536710	SLC16A1	P53985	500 aa		6.97	□□□□□ -1.29
PRKDC-208	ENST00000536710	ADK	P55263	362 aa	Known RBP	6.97	□□□□□ -1.29
PRKDC-208	ENST00000536710	ITGA1	P56199	1179 aa		6.97	□□□□□ -1.29
PRKDC-208	ENST00000536710	CD83	Q01151	205 aa		6.97	□□□□□ -1.29
PRKDC-208	ENST00000536710	MAP3K12	Q12852	859 aa		6.97	□□□□□ -1.29
PRKDC-208	ENST00000536710	PRR23B	Q6ZRT6	265 aa		6.97	□□□□□ -1.29
PRKDC-208	ENST00000536710	OTOP2	Q7RTS6	562 aa		6.97	□□□□□ -1.29
PRKDC-208	ENST00000536710	B3GNT8	Q7Z7M8	397 aa		6.97	□□□□□ -1.29
PRKDC-208	ENST00000536710	DGKH	Q86XP1	1220 aa		6.97	□□□□□ -1.29
PRKDC-208	ENST00000536710	LYSMD2	Q8IV50	215 aa		6.97	□□□□□ -1.29
PRKDC-208	ENST00000536710	THEMIS	Q8N1K5	641 aa	Predicted RBP	6.97	□□□□□ -1.29
PRKDC-208	ENST00000536710	MZB1	Q8WU39	189 aa		6.97	□□□□□ -1.29
PRKDC-208	ENST00000536710	TSPEAR	Q8WU66	669 aa		6.97	□□□□□ -1.29
PRKDC-208	ENST00000536710	HIST1H2AH	Q96KK5	128 aa		6.97	□□□□□ -1.29
PRKDC-208	ENST00000536710	HIST1H2AJ	Q99878	128 aa		6.97	□□□□□ -1.29
PRKDC-208	ENST00000536710	GORASP1	Q9BQQ3	440 aa		6.97	□□□□□ -1.29
PRKDC-208	ENST00000536710	SGPP1	Q9BX95	441 aa		6.97	□□□□□ -1.29
PRKDC-208	ENST00000536710	KCNK12	Q9HB15	430 aa		6.97	□□□□□ -1.29
PRKDC-208	ENST00000536710	PCDH18	Q9HCL0	1135 aa		6.97	□□□□□ -1.29
PRKDC-208	ENST00000536710	PRDM11	Q9NQV5	511 aa		6.97	□□□□□ -1.29
PRKDC-208	ENST00000536710	OBP2A	Q9NY56	170 aa		6.97	□□□□□ -1.29
PRKDC-208	ENST00000536710	KCMF1	Q9P0J7	381 aa		6.97	□□□□□ -1.29
PRKDC-208	ENST00000536710	SAP30BP	Q9UHR5	308 aa	Known RBP	6.97	□□□□□ -1.29
PRKDC-208	ENST00000536710	MBD1	Q9UIS9	605 aa	Predicted RBP	6.97	□□□□□ -1.29
PRKDC-208	ENST00000536710	MAGEL2	Q9UJ55	1249 aa		6.97	□□□□□ -1.29
PRKDC-208	ENST00000536710	TUBD1	Q9UJT1	453 aa		6.97	□□□□□ -1.29
PRKDC-208	ENST00000536710	SYNPO2	Q9UMS6	1093 aa		6.97	□□□□□ -1.29
PRKDC-208	ENST00000536710	DNM3	Q9UQ16	869 aa		6.97	□□□□□ -1.29
PRKDC-208	ENST00000536710	PCDHA5	Q9Y5H7	936 aa		6.97	□□□□□ -1.29
PRKDC-208	ENST00000536710	CDY2A	Q9Y6F7	541 aa		6.97	□□□□□ -1.29
PRKDC-208	ENST00000536710	ARID4B	Q4LE39	1312 aa	Predicted RBP	6.97	□□□□□ -1.29
PRKDC-208	ENST00000536710	MYOCOS	A0A1B0GUC4	107 aa		6.96	□□□□□ -1.3
PRKDC-208	ENST00000536710	PEX10	O60683	326 aa		6.96	□□□□□ -1.3
PRKDC-208	ENST00000536710	IL18BP	O95998	194 aa		6.96	□□□□□ -1.3
PRKDC-208	ENST00000536710	MYL1	P05976	194 aa		6.96	□□□□□ -1.3
PRKDC-208	ENST00000536710	AKAP5	P24588	427 aa		6.96	□□□□□ -1.3
PRKDC-208	ENST00000536710	ADCY8	P40145	1251 aa		6.96	□□□□□ -1.3
PRKDC-208	ENST00000536710	MLANA	Q16655	118 aa		6.96	□□□□□ -1.3
PRKDC-208	ENST00000536710	MAP9	Q49MG5	647 aa		6.96	□□□□□ -1.3
PRKDC-208	ENST00000536710	CATIP	Q7Z7H3	387 aa		6.96	□□□□□ -1.3
PRKDC-208	ENST00000536710	MCOLN1	Q9GZU1	580 aa		6.96	□□□□□ -1.3
PRKDC-208	ENST00000536710	IRS2	Q9Y4H2	1338 aa		6.96	□□□□□ -1.3
PRKDC-208	ENST00000536710	ERC2	O15083	957 aa		6.95	□□□□□ -1.3
PRKDC-208	ENST00000536710	PEX14	O75381	377 aa		6.95	□□□□□ -1.3
PRKDC-208	ENST00000536710	LIMS1	P48059	325 aa		6.95	□□□□□ -1.3
PRKDC-208	ENST00000536710	EPHB3	P54753	998 aa		6.95	□□□□□ -1.3
PRKDC-208	ENST00000536710	FOXO4	P98177	505 aa		6.95	□□□□□ -1.3
PRKDC-208	ENST00000536710	HLTF	Q14527	1009 aa	Known RBP eCLIP	6.95	□□□□□ -1.3
PRKDC-208	ENST00000536710	ZNF267	Q14586	743 aa	Predicted RBP	6.95	□□□□□ -1.3
PRKDC-208	ENST00000536710	DGKD	Q16760	1214 aa		6.95	□□□□□ -1.3

Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms