RNA–Protein interactions for RNA: ENST00000530727.5

PTPRC-214, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 1,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-214ENST00000530727 PRAM1Q96QH2 718 aa5.23□□□□□ -1.57
PTPRC-214ENST00000530727 SPATA25Q9BR10 227 aa5.23□□□□□ -1.57
PTPRC-214ENST00000530727 PANK3Q9H999 370 aa5.23□□□□□ -1.57
PTPRC-214ENST00000530727 SLC52A2Q9HAB3 445 aa5.23□□□□□ -1.57
PTPRC-214ENST00000530727 CATSPERZQ9NTU4 200 aa5.23□□□□□ -1.57
PTPRC-214ENST00000530727 SPATA6Q9NWH7 488 aaPredicted RBP5.23□□□□□ -1.57
PTPRC-214ENST00000530727 SFMBT1Q9UHJ3 866 aa5.23□□□□□ -1.57
PTPRC-214ENST00000530727 KTN1Q86UP2 1357 aaKnown RBP5.23□□□□□ -1.57
PTPRC-214ENST00000530727 PARD3Q8TEW0 1356 aa5.23□□□□□ -1.57
PTPRC-214ENST00000530727 PLEKHH1Q9ULM0 1364 aa5.23□□□□□ -1.57
PTPRC-214ENST00000530727 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.22□□□□□ -1.57
PTPRC-214ENST00000530727 CCDC189A1A4V9 331 aa5.22□□□□□ -1.57
PTPRC-214ENST00000530727 ARVCFO00192 962 aa5.22□□□□□ -1.57
PTPRC-214ENST00000530727 LTFP02788 710 aa5.22□□□□□ -1.57
PTPRC-214ENST00000530727 THBS2P35442 1172 aa5.22□□□□□ -1.57
PTPRC-214ENST00000530727 SARSP49591 514 aaKnown RBP5.22□□□□□ -1.57
PTPRC-214ENST00000530727 FOXD4Q12950 439 aaPredicted RBP5.22□□□□□ -1.57
PTPRC-214ENST00000530727 CCDC184Q52MB2 194 aa5.22□□□□□ -1.57
PTPRC-214ENST00000530727 HABP4Q5JVS0 413 aaKnown RBP5.22□□□□□ -1.57
PTPRC-214ENST00000530727 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.22□□□□□ -1.57
PTPRC-214ENST00000530727 TMTC2Q8N394 836 aa5.22□□□□□ -1.57
PTPRC-214ENST00000530727 PCDH19Q8TAB3 1148 aa5.22□□□□□ -1.57
PTPRC-214ENST00000530727 CLEC4DQ8WXI8 215 aa5.22□□□□□ -1.57
PTPRC-214ENST00000530727 ZSWIM3Q96MP5 696 aa5.22□□□□□ -1.57
PTPRC-214ENST00000530727 STK26Q9P289 416 aa5.22□□□□□ -1.57
PTPRC-214ENST00000530727 ADGRB2O60241 1585 aa5.22□□□□□ -1.57
PTPRC-214ENST00000530727 NPC1L1Q9UHC9 1359 aa5.22□□□□□ -1.57
PTPRC-214ENST00000530727 USP32Q8NFA0 1604 aa5.22□□□□□ -1.57
PTPRC-214ENST00000530727 GSTA4O15217 222 aa5.22□□□□□ -1.57
PTPRC-214ENST00000530727 WDHD1O75717 1129 aaPredicted RBP5.22□□□□□ -1.57
PTPRC-214ENST00000530727 PYGMP11217 842 aa5.22□□□□□ -1.57
PTPRC-214ENST00000530727 HOXA5P20719 270 aa5.22□□□□□ -1.57
PTPRC-214ENST00000530727 TKFCQ3LXA3 575 aa5.22□□□□□ -1.57
PTPRC-214ENST00000530727 FAM47CQ5HY64 1035 aa5.22□□□□□ -1.57
PTPRC-214ENST00000530727 TMC5Q6UXY8 1006 aa5.22□□□□□ -1.57
PTPRC-214ENST00000530727 EP400NLQ6ZTU2 488 aa5.22□□□□□ -1.57
PTPRC-214ENST00000530727 KCTD1Q719H9 257 aa5.22□□□□□ -1.57
PTPRC-214ENST00000530727 ZDHHC14Q8IZN3 488 aa5.22□□□□□ -1.57
PTPRC-214ENST00000530727 CD244Q9BZW8 370 aa5.22□□□□□ -1.57
PTPRC-214ENST00000530727 GNL3LQ9NVN8 582 aaKnown RBP5.22□□□□□ -1.57
PTPRC-214ENST00000530727 PIK3R4Q99570 1358 aa5.21□□□□□ -1.57
PTPRC-214ENST00000530727 CD163L1Q9NR16 1453 aa5.21□□□□□ -1.58
PTPRC-214ENST00000530727 EVC2Q86UK5 1308 aa5.21□□□□□ -1.58
PTPRC-214ENST00000530727 OTOL1A6NHN0 477 aaPredicted RBP5.21□□□□□ -1.58
PTPRC-214ENST00000530727 WNT9AO14904 365 aa5.21□□□□□ -1.58
PTPRC-214ENST00000530727 GNALP38405 381 aa5.21□□□□□ -1.58
PTPRC-214ENST00000530727 CDKN1CP49918 316 aaPredicted RBP5.21□□□□□ -1.58
PTPRC-214ENST00000530727 ADAM9Q13443 819 aa5.21□□□□□ -1.58
PTPRC-214ENST00000530727 GPR19Q15760 415 aa5.21□□□□□ -1.58
PTPRC-214ENST00000530727 PAN2Q504Q3 1202 aaKnown RBP5.21□□□□□ -1.58
PTPRC-214ENST00000530727 MAGEB10Q96LZ2 347 aaPredicted RBP5.21□□□□□ -1.58
PTPRC-214ENST00000530727 CLIC6Q96NY7 704 aa5.21□□□□□ -1.58
PTPRC-214ENST00000530727 MPHOSPH6Q99547 160 aaKnown RBP5.21□□□□□ -1.58
PTPRC-214ENST00000530727 XYLT2Q9H1B5 865 aa5.21□□□□□ -1.58
PTPRC-214ENST00000530727 USP40Q9NVE5 1235 aa5.21□□□□□ -1.58
PTPRC-214ENST00000530727 RAPGEFL1Q9UHV5 662 aa5.21□□□□□ -1.58
PTPRC-214ENST00000530727 COMMD10Q9Y6G5 202 aa5.21□□□□□ -1.58
PTPRC-214ENST00000530727 PTCH1Q13635 1447 aa5.2□□□□□ -1.58
PTPRC-214ENST00000530727 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.2□□□□□ -1.58
PTPRC-214ENST00000530727 KRT15P19012 456 aa5.2□□□□□ -1.58
PTPRC-214ENST00000530727 RPL13P26373 211 aaKnown RBP5.2□□□□□ -1.58
PTPRC-214ENST00000530727 DNM2P50570 870 aa5.2□□□□□ -1.58
PTPRC-214ENST00000530727 CTSWP56202 376 aa5.2□□□□□ -1.58
PTPRC-214ENST00000530727 EXOSC10Q01780 885 aaKnown RBP5.2□□□□□ -1.58
PTPRC-214ENST00000530727 BRDTQ58F21 947 aaPredicted RBP5.2□□□□□ -1.58
PTPRC-214ENST00000530727 TRIM61Q5EBN2 209 aa5.2□□□□□ -1.58
PTPRC-214ENST00000530727 PRAMEF18Q5VWM3 479 aa5.2□□□□□ -1.58
PTPRC-214ENST00000530727 VASNQ6EMK4 673 aa5.2□□□□□ -1.58
PTPRC-214ENST00000530727 ARHGAP36Q6ZRI8 547 aa5.2□□□□□ -1.58
PTPRC-214ENST00000530727 C16orf86Q6ZW13 317 aa5.2□□□□□ -1.58
PTPRC-214ENST00000530727 C16orf59Q7L2K0 433 aa5.2□□□□□ -1.58
PTPRC-214ENST00000530727 GSTCDQ8NEC7 633 aa5.2□□□□□ -1.58
PTPRC-214ENST00000530727 SLC7A14Q8TBB6 771 aa5.2□□□□□ -1.58
PTPRC-214ENST00000530727 IL17RAQ96F46 866 aa5.2□□□□□ -1.58
PTPRC-214ENST00000530727 TMEM209Q96SK2 561 aa5.2□□□□□ -1.58
PTPRC-214ENST00000530727 FEZ1Q99689 392 aa5.2□□□□□ -1.58
PTPRC-214ENST00000530727 MRPL4Q9BYD3 311 aaKnown RBP5.2□□□□□ -1.58
PTPRC-214ENST00000530727 SLC12A5Q9H2X9 1139 aa5.2□□□□□ -1.58
PTPRC-214ENST00000530727 RBPJLQ9UBG7 517 aa5.2□□□□□ -1.58
PTPRC-214ENST00000530727 TELO2Q9Y4R8 837 aa5.2□□□□□ -1.58
PTPRC-214ENST00000530727 TCRBV5S4A2TA0A5A2 114 aa5.2□□□□□ -1.58
PTPRC-214ENST00000530727 CCDC66A2RUB6 948 aa5.2□□□□□ -1.58
PTPRC-214ENST00000530727 RASGRP1O95267 797 aa5.2□□□□□ -1.58
PTPRC-214ENST00000530727 VIL1P09327 827 aaKnown RBP5.2□□□□□ -1.58
PTPRC-214ENST00000530727 PDE6AP16499 860 aa5.2□□□□□ -1.58
PTPRC-214ENST00000530727 FAHP16930 419 aa5.2□□□□□ -1.58
PTPRC-214ENST00000530727 SQSTM1Q13501 440 aa5.2□□□□□ -1.58
PTPRC-214ENST00000530727 CRY1Q16526 586 aa5.2□□□□□ -1.58
PTPRC-214ENST00000530727 NT5DC1Q5TFE4 455 aa5.2□□□□□ -1.58
PTPRC-214ENST00000530727 CCSAPQ6IQ19 270 aaPredicted RBP5.2□□□□□ -1.58
PTPRC-214ENST00000530727 BRAPQ7Z569 592 aa5.2□□□□□ -1.58
PTPRC-214ENST00000530727 NLGN4XQ8N0W4 816 aa5.2□□□□□ -1.58
PTPRC-214ENST00000530727 SH3RF2Q8TEC5 729 aa5.2□□□□□ -1.58
PTPRC-214ENST00000530727 WRNIP1Q96S55 665 aa5.2□□□□□ -1.58
PTPRC-214ENST00000530727 NCOA5Q9HCD5 579 aaKnown RBP5.2□□□□□ -1.58
PTPRC-214ENST00000530727 TMEM260Q9NX78 707 aa5.2□□□□□ -1.58
PTPRC-214ENST00000530727 CROTQ9UKG9 612 aa5.2□□□□□ -1.58
PTPRC-214ENST00000530727 CBLCQ9ULV8 474 aa5.2□□□□□ -1.58
PTPRC-214ENST00000530727 SRPK3Q9UPE1 567 aa5.2□□□□□ -1.58
PTPRC-214ENST00000530727 ATP8A1Q9Y2Q0 1164 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms