RNA–Protein interactions for RNA: ENST00000530309.1

CASP4-208, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 481 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-208ENST00000530309 RFXAPO00287 272 aa7.96□□□□□ -1.14
CASP4-208ENST00000530309 AKAP10O43572 662 aa7.96□□□□□ -1.14
CASP4-208ENST00000530309 PCDHGA12O60330 932 aa7.96□□□□□ -1.14
CASP4-208ENST00000530309 MTHFD2P13995 350 aa7.96□□□□□ -1.14
CASP4-208ENST00000530309 PIN1Q13526 163 aaPredicted RBP7.96□□□□□ -1.14
CASP4-208ENST00000530309 TRIM25Q14258 630 aaKnown RBP7.96□□□□□ -1.14
CASP4-208ENST00000530309 NFE2Q16621 373 aaPredicted RBP7.96□□□□□ -1.14
CASP4-208ENST00000530309 VWA3BQ502W6 1294 aa7.96□□□□□ -1.14
CASP4-208ENST00000530309 ZNF385BQ569K4 471 aa7.96□□□□□ -1.14
CASP4-208ENST00000530309 TOR2AQ5JU69 321 aa7.96□□□□□ -1.14
CASP4-208ENST00000530309 ZNF648Q5T619 568 aaPredicted RBP7.96□□□□□ -1.14
CASP4-208ENST00000530309 GRAMD4Q6IC98 578 aa7.96□□□□□ -1.14
CASP4-208ENST00000530309 OTOP2Q7RTS6 562 aa7.96□□□□□ -1.14
CASP4-208ENST00000530309 KCNK18Q7Z418 384 aa7.96□□□□□ -1.14
CASP4-208ENST00000530309 BMP8AQ7Z5Y6 402 aa7.96□□□□□ -1.14
CASP4-208ENST00000530309 ZCCHC14Q8WYQ9 949 aaKnown RBP7.96□□□□□ -1.14
CASP4-208ENST00000530309 PRDM12Q9H4Q4 367 aa7.96□□□□□ -1.14
CASP4-208ENST00000530309 PRSS50Q9UI38 385 aa7.96□□□□□ -1.14
CASP4-208ENST00000530309 PCDHB6Q9Y5E3 794 aa7.96□□□□□ -1.14
CASP4-208ENST00000530309 PCDHGA9Q9Y5G4 932 aaKnown RBP7.96□□□□□ -1.14
CASP4-208ENST00000530309 PCDHGA8Q9Y5G5 932 aa7.96□□□□□ -1.14
CASP4-208ENST00000530309 PCDHGA7Q9Y5G6 932 aa7.96□□□□□ -1.14
CASP4-208ENST00000530309 PCDHGA6Q9Y5G7 932 aa7.96□□□□□ -1.14
CASP4-208ENST00000530309 PCDHGA3Q9Y5H0 932 aa7.96□□□□□ -1.14
CASP4-208ENST00000530309 PCDHGA2Q9Y5H1 932 aa7.96□□□□□ -1.14
CASP4-208ENST00000530309 XPOTO43592 962 aaKnown RBP7.95□□□□□ -1.14
CASP4-208ENST00000530309 SNUPNO95149 360 aaKnown RBP7.95□□□□□ -1.14
CASP4-208ENST00000530309 PARNO95453 639 aaKnown RBP7.95□□□□□ -1.14
CASP4-208ENST00000530309 ZNF28P17035 718 aa7.95□□□□□ -1.14
CASP4-208ENST00000530309 ADCY8P40145 1251 aa7.95□□□□□ -1.14
CASP4-208ENST00000530309 RECQLP46063 649 aaPredicted RBP7.95□□□□□ -1.14
CASP4-208ENST00000530309 MTNR1BP49286 362 aa7.95□□□□□ -1.14
CASP4-208ENST00000530309 DGKDQ16760 1214 aa7.95□□□□□ -1.14
CASP4-208ENST00000530309 SLC41A1Q8IVJ1 513 aa7.95□□□□□ -1.14
CASP4-208ENST00000530309 CDYL2Q8N8U2 506 aa7.95□□□□□ -1.14
CASP4-208ENST00000530309 OR5AN1Q8NGI8 311 aa7.95□□□□□ -1.14
CASP4-208ENST00000530309 ZNF526Q8TF50 670 aaPredicted RBP7.95□□□□□ -1.14
CASP4-208ENST00000530309 SSH1Q8WYL5 1049 aa7.95□□□□□ -1.14
CASP4-208ENST00000530309 DACT3Q96B18 629 aaPredicted RBP7.95□□□□□ -1.14
CASP4-208ENST00000530309 NOL10Q9BSC4 688 aaKnown RBP7.95□□□□□ -1.14
CASP4-208ENST00000530309 L2HGDHQ9H9P8 463 aa7.95□□□□□ -1.14
CASP4-208ENST00000530309 ZNF277Q9NRM2 450 aaPredicted RBP7.95□□□□□ -1.14
CASP4-208ENST00000530309 NTMQ9P121 344 aa7.95□□□□□ -1.14
CASP4-208ENST00000530309 USP18Q9UMW8 372 aa7.95□□□□□ -1.14
CASP4-208ENST00000530309 LUC7L2Q9Y383 392 aaKnown RBP7.95□□□□□ -1.14
CASP4-208ENST00000530309 GPR45Q9Y5Y3 372 aa7.95□□□□□ -1.14
CASP4-208ENST00000530309 A0A0G2JNJ9 132 aa7.94□□□□□ -1.14
CASP4-208ENST00000530309 DDX3XO00571 662 aaKnown RBP eCLIP7.94□□□□□ -1.14
CASP4-208ENST00000530309 MARCH6O60337 910 aa7.94□□□□□ -1.14
CASP4-208ENST00000530309 CUTAO60888 179 aa7.94□□□□□ -1.14
CASP4-208ENST00000530309 AGXTP21549 392 aa7.94□□□□□ -1.14
CASP4-208ENST00000530309 LGALS4P56470 323 aa7.94□□□□□ -1.14
CASP4-208ENST00000530309 LINC00310P59036 64 aa7.94□□□□□ -1.14
CASP4-208ENST00000530309 ACAP2Q15057 778 aa7.94□□□□□ -1.14
CASP4-208ENST00000530309 KCNA10Q16322 511 aa7.94□□□□□ -1.14
CASP4-208ENST00000530309 TMEM200BQ69YZ2 307 aa7.94□□□□□ -1.14
CASP4-208ENST00000530309 OR14C36Q8NHC7 312 aa7.94□□□□□ -1.14
CASP4-208ENST00000530309 GAB3Q8WWW8 586 aa7.94□□□□□ -1.14
CASP4-208ENST00000530309 AUTS2Q8WXX7 1259 aa7.94□□□□□ -1.14
CASP4-208ENST00000530309 HIST1H2AHQ96KK5 128 aa7.94□□□□□ -1.14
CASP4-208ENST00000530309 CAMKK2Q96RR4 588 aa7.94□□□□□ -1.14
CASP4-208ENST00000530309 HIST1H2AJQ99878 128 aa7.94□□□□□ -1.14
CASP4-208ENST00000530309 HAPLN2Q9GZV7 340 aa7.94□□□□□ -1.14
CASP4-208ENST00000530309 Q9UFV3 132 aa7.94□□□□□ -1.14
CASP4-208ENST00000530309 DPP7Q9UHL4 492 aa7.94□□□□□ -1.14
CASP4-208ENST00000530309 SYNPO2Q9UMS6 1093 aa7.94□□□□□ -1.14
CASP4-208ENST00000530309 SH3D21A4FU49 640 aa7.93□□□□□ -1.14
CASP4-208ENST00000530309 KLHL18O94889 574 aa7.93□□□□□ -1.14
CASP4-208ENST00000530309 CELA3BP08861 270 aa7.93□□□□□ -1.14
CASP4-208ENST00000530309 POLD1P28340 1107 aa7.93□□□□□ -1.14
CASP4-208ENST00000530309 RAP1GAPP47736 663 aa7.93□□□□□ -1.14
CASP4-208ENST00000530309 GPR15P49685 360 aa7.93□□□□□ -1.14
CASP4-208ENST00000530309 SLC5A3P53794 718 aa7.93□□□□□ -1.14
CASP4-208ENST00000530309 ANTXR2P58335 489 aa7.93□□□□□ -1.14
CASP4-208ENST00000530309 PPARAQ07869 468 aa7.93□□□□□ -1.14
CASP4-208ENST00000530309 SPIDRQ14159 915 aa7.93□□□□□ -1.14
CASP4-208ENST00000530309 ODF1Q14990 250 aa7.93□□□□□ -1.14
CASP4-208ENST00000530309 PPP2R5AQ15172 486 aa7.93□□□□□ -1.14
CASP4-208ENST00000530309 MUM1Q2TAK8 710 aa7.93□□□□□ -1.14
CASP4-208ENST00000530309 CCDC178Q5BJE1 867 aa7.93□□□□□ -1.14
CASP4-208ENST00000530309 EFCAB2Q5VUJ9 269 aa7.93□□□□□ -1.14
CASP4-208ENST00000530309 FMNL2Q96PY5 1086 aa7.93□□□□□ -1.14
CASP4-208ENST00000530309 CDH19Q9H159 772 aa7.93□□□□□ -1.14
CASP4-208ENST00000530309 TCF7L1Q9HCS4 588 aa7.93□□□□□ -1.14
CASP4-208ENST00000530309 LUC7LQ9NQ29 371 aaKnown RBP7.93□□□□□ -1.14
CASP4-208ENST00000530309 ZIM2Q9NZV7 527 aa7.93□□□□□ -1.14
CASP4-208ENST00000530309 CHPF2Q9P2E5 772 aa7.93□□□□□ -1.14
CASP4-208ENST00000530309 SAE1Q9UBE0 346 aaPredicted RBP7.93□□□□□ -1.14
CASP4-208ENST00000530309 INVSQ9Y283 1065 aa7.93□□□□□ -1.14
CASP4-208ENST00000530309 ABLIM3O94929 683 aa7.92□□□□□ -1.14
CASP4-208ENST00000530309 OSMP13725 252 aa7.92□□□□□ -1.14
CASP4-208ENST00000530309 SARSP49591 514 aaKnown RBP7.92□□□□□ -1.14
CASP4-208ENST00000530309 TOP3AQ13472 1001 aaPredicted RBP7.92□□□□□ -1.14
CASP4-208ENST00000530309 EIF4HQ15056 248 aaKnown RBP7.92□□□□□ -1.14
CASP4-208ENST00000530309 PKN1Q16512 942 aa7.92□□□□□ -1.14
CASP4-208ENST00000530309 TMEM240Q5SV17 173 aa7.92□□□□□ -1.14
CASP4-208ENST00000530309 FMNL3Q8IVF7 1028 aa7.92□□□□□ -1.14
CASP4-208ENST00000530309 BCL6BQ8N143 479 aaPredicted RBP7.92□□□□□ -1.14
CASP4-208ENST00000530309 CPA6Q8N4T0 437 aa7.92□□□□□ -1.14
CASP4-208ENST00000530309 NUDT10Q8NFP7 164 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms