RNA–Protein interactions for RNA: ENST00000525970.5

CSDE1-211, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-211ENST00000525970 OSTM1Q86WC4 334 aa5.93□□□□□ -1.46
CSDE1-211ENST00000525970 SVIPQ8NHG7 77 aa5.93□□□□□ -1.46
CSDE1-211ENST00000525970 UHMK1Q8TAS1 419 aaKnown RBP5.93□□□□□ -1.46
CSDE1-211ENST00000525970 FAXDC2Q96IV6 333 aa5.93□□□□□ -1.46
CSDE1-211ENST00000525970 SCYL1Q96KG9 808 aa5.93□□□□□ -1.46
CSDE1-211ENST00000525970 SYT3Q9BQG1 590 aa5.93□□□□□ -1.46
CSDE1-211ENST00000525970 CD244Q9BZW8 370 aa5.93□□□□□ -1.46
CSDE1-211ENST00000525970 PCDHGA12O60330 932 aa5.92□□□□□ -1.46
CSDE1-211ENST00000525970 CYP7B1O75881 506 aa5.92□□□□□ -1.46
CSDE1-211ENST00000525970 MT-CO1P00395 513 aa5.92□□□□□ -1.46
CSDE1-211ENST00000525970 U2AF1L5P0DN76 240 aaPredicted RBP5.92□□□□□ -1.46
CSDE1-211ENST00000525970 RECQLP46063 649 aaPredicted RBP5.92□□□□□ -1.46
CSDE1-211ENST00000525970 PHC1P78364 1004 aa5.92□□□□□ -1.46
CSDE1-211ENST00000525970 U2AF1Q01081 240 aaKnown RBP eCLIP5.92□□□□□ -1.46
CSDE1-211ENST00000525970 TCIRG1Q13488 830 aa5.92□□□□□ -1.46
CSDE1-211ENST00000525970 HDAC1Q13547 482 aaPredicted RBP5.92□□□□□ -1.46
CSDE1-211ENST00000525970 TERF2Q15554 542 aa5.92□□□□□ -1.46
CSDE1-211ENST00000525970 GPR19Q15760 415 aa5.92□□□□□ -1.46
CSDE1-211ENST00000525970 CR1LQ2VPA4 569 aa5.92□□□□□ -1.46
CSDE1-211ENST00000525970 HABP4Q5JVS0 413 aaKnown RBP5.92□□□□□ -1.46
CSDE1-211ENST00000525970 SYCP2LQ5T4T6 812 aa5.92□□□□□ -1.46
CSDE1-211ENST00000525970 KRTAP5-3Q6L8H2 238 aa5.92□□□□□ -1.46
CSDE1-211ENST00000525970 TEPPQ6URK8 271 aa5.92□□□□□ -1.46
CSDE1-211ENST00000525970 KCTD1Q719H9 257 aa5.92□□□□□ -1.46
CSDE1-211ENST00000525970 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.92□□□□□ -1.46
CSDE1-211ENST00000525970 TPH2Q8IWU9 490 aa5.92□□□□□ -1.46
CSDE1-211ENST00000525970 CISD2Q8N5K1 135 aaKnown RBP5.92□□□□□ -1.46
CSDE1-211ENST00000525970 SLC16A11Q8NCK7 471 aa5.92□□□□□ -1.46
CSDE1-211ENST00000525970 SMURF1Q9HCE7 757 aa5.92□□□□□ -1.46
CSDE1-211ENST00000525970 ANKRD6Q9Y2G4 727 aa5.92□□□□□ -1.46
CSDE1-211ENST00000525970 GIT1Q9Y2X7 761 aa5.92□□□□□ -1.46
CSDE1-211ENST00000525970 TSC22D4Q9Y3Q8 395 aa5.92□□□□□ -1.46
CSDE1-211ENST00000525970 PCDHGA9Q9Y5G4 932 aaKnown RBP5.92□□□□□ -1.46
CSDE1-211ENST00000525970 PCDHGA8Q9Y5G5 932 aa5.92□□□□□ -1.46
CSDE1-211ENST00000525970 PCDHGA7Q9Y5G6 932 aa5.92□□□□□ -1.46
CSDE1-211ENST00000525970 PCDHGA6Q9Y5G7 932 aa5.92□□□□□ -1.46
CSDE1-211ENST00000525970 PCDHGA3Q9Y5H0 932 aa5.92□□□□□ -1.46
CSDE1-211ENST00000525970 PCDHGA2Q9Y5H1 932 aa5.92□□□□□ -1.46
CSDE1-211ENST00000525970 TCRBV5S4A2TA0A5A2 114 aa5.91□□□□□ -1.46
CSDE1-211ENST00000525970 DVL2O14641 736 aa5.91□□□□□ -1.46
CSDE1-211ENST00000525970 LRG1P02750 347 aa5.91□□□□□ -1.46
CSDE1-211ENST00000525970 AMY2AP04746 511 aa5.91□□□□□ -1.46
CSDE1-211ENST00000525970 AMY2BP19961 511 aa5.91□□□□□ -1.46
CSDE1-211ENST00000525970 LPOP22079 712 aaPredicted RBP5.91□□□□□ -1.46
CSDE1-211ENST00000525970 JAM2P57087 298 aa5.91□□□□□ -1.46
CSDE1-211ENST00000525970 SMAD3P84022 425 aaKnown RBP5.91□□□□□ -1.46
CSDE1-211ENST00000525970 ADAM9Q13443 819 aa5.91□□□□□ -1.46
CSDE1-211ENST00000525970 LRRC32Q14392 662 aa5.91□□□□□ -1.46
CSDE1-211ENST00000525970 ODF1Q14990 250 aa5.91□□□□□ -1.46
CSDE1-211ENST00000525970 SMAD2Q15796 467 aaKnown RBP5.91□□□□□ -1.46
CSDE1-211ENST00000525970 DDB1Q16531 1140 aa5.91□□□□□ -1.46
CSDE1-211ENST00000525970 GPR158Q5T848 1215 aa5.91□□□□□ -1.46
CSDE1-211ENST00000525970 BROXQ5VW32 411 aa5.91□□□□□ -1.46
CSDE1-211ENST00000525970 EPM2AIP1Q7L775 607 aaPredicted RBP5.91□□□□□ -1.46
CSDE1-211ENST00000525970 HDGFL2Q7Z4V5 671 aaPredicted RBP5.91□□□□□ -1.46
CSDE1-211ENST00000525970 RASSF3Q86WH2 238 aa5.91□□□□□ -1.46
CSDE1-211ENST00000525970 PTRH1Q86Y79 214 aaKnown RBP5.91□□□□□ -1.46
CSDE1-211ENST00000525970 CMTR2Q8IYT2 770 aaKnown RBP5.91□□□□□ -1.46
CSDE1-211ENST00000525970 NLGN4XQ8N0W4 816 aa5.91□□□□□ -1.46
CSDE1-211ENST00000525970 C2orf69Q8N8R5 385 aa5.91□□□□□ -1.46
CSDE1-211ENST00000525970 WRNIP1Q96S55 665 aa5.91□□□□□ -1.46
CSDE1-211ENST00000525970 CDK5RAP1Q96SZ6 601 aaKnown RBP5.91□□□□□ -1.46
CSDE1-211ENST00000525970 BOCQ9BWV1 1114 aa5.91□□□□□ -1.46
CSDE1-211ENST00000525970 C14orf119Q9NWQ9 140 aa5.91□□□□□ -1.46
CSDE1-211ENST00000525970 SPO11Q9Y5K1 396 aa5.91□□□□□ -1.46
CSDE1-211ENST00000525970 COMMD10Q9Y6G5 202 aa5.91□□□□□ -1.46
CSDE1-211ENST00000525970 VSTM5A8MXK1 200 aa5.9□□□□□ -1.46
CSDE1-211ENST00000525970 KCNK3O14649 394 aa5.9□□□□□ -1.46
CSDE1-211ENST00000525970 B4GALT3O60512 393 aa5.9□□□□□ -1.46
CSDE1-211ENST00000525970 SNUPNO95149 360 aaKnown RBP5.9□□□□□ -1.46
CSDE1-211ENST00000525970 CFBP00751 764 aa5.9□□□□□ -1.46
CSDE1-211ENST00000525970 FSHBP01225 129 aa5.9□□□□□ -1.46
CSDE1-211ENST00000525970 CYP1A1P04798 512 aaPredicted RBP5.9□□□□□ -1.46
CSDE1-211ENST00000525970 PF4V1P10720 104 aa5.9□□□□□ -1.46
CSDE1-211ENST00000525970 TRIM27P14373 513 aa5.9□□□□□ -1.46
CSDE1-211ENST00000525970 PURAQ00577 322 aaKnown RBP5.9□□□□□ -1.46
CSDE1-211ENST00000525970 GBX1Q14549 363 aa5.9□□□□□ -1.46
CSDE1-211ENST00000525970 VPS72Q15906 364 aa5.9□□□□□ -1.46
CSDE1-211ENST00000525970 PAN2Q504Q3 1202 aaKnown RBP5.9□□□□□ -1.46
CSDE1-211ENST00000525970 PRAMEF18Q5VWM3 479 aa5.9□□□□□ -1.46
CSDE1-211ENST00000525970 BTBD8Q5XKL5 378 aa5.9□□□□□ -1.46
CSDE1-211ENST00000525970 CYB5RLQ6IPT4 315 aa5.9□□□□□ -1.46
CSDE1-211ENST00000525970 FSTL4Q6MZW2 842 aa5.9□□□□□ -1.46
CSDE1-211ENST00000525970 TMC5Q6UXY8 1006 aa5.9□□□□□ -1.46
CSDE1-211ENST00000525970 LIMS2Q7Z4I7 341 aa5.9□□□□□ -1.46
CSDE1-211ENST00000525970 TTLL11Q8NHH1 800 aa5.9□□□□□ -1.46
CSDE1-211ENST00000525970 SH3RF2Q8TEC5 729 aa5.9□□□□□ -1.46
CSDE1-211ENST00000525970 YTHDC1Q96MU7 727 aaKnown RBP5.9□□□□□ -1.46
CSDE1-211ENST00000525970 CLIC6Q96NY7 704 aa5.9□□□□□ -1.46
CSDE1-211ENST00000525970 SORCS2Q96PQ0 1159 aa5.9□□□□□ -1.46
CSDE1-211ENST00000525970 NUP88Q99567 741 aaPredicted RBP5.9□□□□□ -1.46
CSDE1-211ENST00000525970 RIC8BQ9NVN3 520 aa5.9□□□□□ -1.46
CSDE1-211ENST00000525970 PPP4R1LQ9P1A2 415 aa5.9□□□□□ -1.46
CSDE1-211ENST00000525970 TELO2Q9Y4R8 837 aa5.9□□□□□ -1.46
CSDE1-211ENST00000525970 ATP23Q9Y6H3 246 aa5.9□□□□□ -1.46
CSDE1-211ENST00000525970 SUV39H1O43463 412 aa5.89□□□□□ -1.47
CSDE1-211ENST00000525970 EIF5BO60841 1220 aaKnown RBP5.89□□□□□ -1.47
CSDE1-211ENST00000525970 C6P13671 934 aa5.89□□□□□ -1.47
CSDE1-211ENST00000525970 FAHP16930 419 aa5.89□□□□□ -1.47
CSDE1-211ENST00000525970 TACR2P21452 398 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms