RNA–Protein interactions for RNA: ENST00000525132.1

CSDE1-209, Transcript of cold shock domain containing E1, humanhuman

TSL 5

Gene CSDE1, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-209ENST00000525132 IRS4O14654 1257 aaPredicted RBP4.2□□□□□ -1.74
CSDE1-209ENST00000525132 KCNAB3O43448 404 aa4.2□□□□□ -1.74
CSDE1-209ENST00000525132 PQBP1O60828 265 aaKnown RBP4.2□□□□□ -1.74
CSDE1-209ENST00000525132 ZNF865P0CJ78 1059 aaPredicted RBP4.2□□□□□ -1.74
CSDE1-209ENST00000525132 CYP2C8P10632 490 aa4.2□□□□□ -1.74
CSDE1-209ENST00000525132 SRFP11831 508 aa4.2□□□□□ -1.74
CSDE1-209ENST00000525132 ATP2A2P16615 1042 aaKnown RBP4.2□□□□□ -1.74
CSDE1-209ENST00000525132 CYP27A1Q02318 531 aa4.2□□□□□ -1.74
CSDE1-209ENST00000525132 SCAPQ12770 1279 aa4.2□□□□□ -1.74
CSDE1-209ENST00000525132 SNAP47Q5SQN1 464 aa4.2□□□□□ -1.74
CSDE1-209ENST00000525132 PRAMEF13Q5VWM6 474 aa4.2□□□□□ -1.74
CSDE1-209ENST00000525132 SLC6A19Q695T7 634 aa4.2□□□□□ -1.74
CSDE1-209ENST00000525132 GIMAP6Q6P9H5 292 aa4.2□□□□□ -1.74
CSDE1-209ENST00000525132 NBPF5PQ86XG9 351 aaPredicted RBP4.2□□□□□ -1.74
CSDE1-209ENST00000525132 TICAM1Q8IUC6 712 aa4.2□□□□□ -1.74
CSDE1-209ENST00000525132 DNAJC10Q8IXB1 793 aa4.2□□□□□ -1.74
CSDE1-209ENST00000525132 TOP6BLQ8N6T0 577 aa4.2□□□□□ -1.74
CSDE1-209ENST00000525132 JARID2Q92833 1246 aaPredicted RBP4.2□□□□□ -1.74
CSDE1-209ENST00000525132 TMEM87BQ96K49 555 aa4.2□□□□□ -1.74
CSDE1-209ENST00000525132 CHMP4AQ9BY43 222 aa4.2□□□□□ -1.74
CSDE1-209ENST00000525132 FOXQ1Q9C009 403 aa4.2□□□□□ -1.74
CSDE1-209ENST00000525132 TANGO6Q9C0B7 1094 aa4.2□□□□□ -1.74
CSDE1-209ENST00000525132 MTIF3Q9H2K0 278 aaKnown RBP4.2□□□□□ -1.74
CSDE1-209ENST00000525132 C14orf93Q9H972 538 aaKnown RBP4.2□□□□□ -1.74
CSDE1-209ENST00000525132 ZC3H7BQ9UGR2 993 aaKnown RBP4.2□□□□□ -1.74
CSDE1-209ENST00000525132 ZBTB1Q9Y2K1 713 aa4.2□□□□□ -1.74
CSDE1-209ENST00000525132 WASHC2AQ641Q2 1341 aa4.2□□□□□ -1.74
CSDE1-209ENST00000525132 MYBBP1AQ9BQG0 1328 aaKnown RBP4.2□□□□□ -1.74
CSDE1-209ENST00000525132 ANKRD62A6NC57 917 aa4.19□□□□□ -1.74
CSDE1-209ENST00000525132 RNGTTO60942 597 aaKnown RBP4.19□□□□□ -1.74
CSDE1-209ENST00000525132 PGRP06401 933 aa4.19□□□□□ -1.74
CSDE1-209ENST00000525132 VIL1P09327 827 aaKnown RBP4.19□□□□□ -1.74
CSDE1-209ENST00000525132 ADCYAP1R1P41586 468 aa4.19□□□□□ -1.74
CSDE1-209ENST00000525132 SOX9P48436 509 aa4.19□□□□□ -1.74
CSDE1-209ENST00000525132 SMAD4Q13485 552 aaKnown RBP4.19□□□□□ -1.74
CSDE1-209ENST00000525132 NKPD1Q17RQ9 610 aa4.19□□□□□ -1.74
CSDE1-209ENST00000525132 DPP8Q6V1X1 898 aaPredicted RBP4.19□□□□□ -1.74
CSDE1-209ENST00000525132 NT5DC4Q86YG4 428 aa4.19□□□□□ -1.74
CSDE1-209ENST00000525132 KIAA0825Q8IV33 1275 aa4.19□□□□□ -1.74
CSDE1-209ENST00000525132 SPACA3Q8IXA5 215 aa4.19□□□□□ -1.74
CSDE1-209ENST00000525132 MFSD2AQ8NA29 543 aa4.19□□□□□ -1.74
CSDE1-209ENST00000525132 KREMEN2Q8NCW0 462 aa4.19□□□□□ -1.74
CSDE1-209ENST00000525132 RIN3Q8TB24 985 aa4.19□□□□□ -1.74
CSDE1-209ENST00000525132 LGR6Q9HBX8 967 aa4.19□□□□□ -1.74
CSDE1-209ENST00000525132 BRMS1Q9HCU9 246 aa4.19□□□□□ -1.74
CSDE1-209ENST00000525132 SEMA4GQ9NTN9 838 aa4.19□□□□□ -1.74
CSDE1-209ENST00000525132 REV1Q9UBZ9 1251 aa4.19□□□□□ -1.74
CSDE1-209ENST00000525132 GJD2Q9UKL4 321 aa4.19□□□□□ -1.74
CSDE1-209ENST00000525132 MAPK8IP1Q9UQF2 711 aa4.19□□□□□ -1.74
CSDE1-209ENST00000525132 ARHGEF17Q96PE2 2063 aaPredicted RBP4.18□□□□□ -1.74
CSDE1-209ENST00000525132 ATMQ13315 3056 aa4.18□□□□□ -1.74
CSDE1-209ENST00000525132 DOCK3Q8IZD9 2030 aa4.18□□□□□ -1.74
CSDE1-209ENST00000525132 WNT10BO00744 389 aa4.18□□□□□ -1.74
CSDE1-209ENST00000525132 KRT10P13645 584 aa4.18□□□□□ -1.74
CSDE1-209ENST00000525132 NOVA1P51513 510 aaKnown RBP4.18□□□□□ -1.74
CSDE1-209ENST00000525132 CLCQ05315 142 aa4.18□□□□□ -1.74
CSDE1-209ENST00000525132 CDCP2Q5VXM1 449 aa4.18□□□□□ -1.74
CSDE1-209ENST00000525132 NOP9Q86U38 636 aaKnown RBP4.18□□□□□ -1.74
CSDE1-209ENST00000525132 RBBP8NLQ8NC74 664 aaPredicted RBP4.18□□□□□ -1.74
CSDE1-209ENST00000525132 CYB5D2Q8WUJ1 264 aa4.18□□□□□ -1.74
CSDE1-209ENST00000525132 DNAJC2Q99543 621 aaKnown RBP4.18□□□□□ -1.74
CSDE1-209ENST00000525132 SPON2Q9BUD6 331 aa4.18□□□□□ -1.74
CSDE1-209ENST00000525132 OSBPL1AQ9BXW6 950 aa4.18□□□□□ -1.74
CSDE1-209ENST00000525132 SEMA4CQ9C0C4 833 aa4.18□□□□□ -1.74
CSDE1-209ENST00000525132 TGIF2Q9GZN2 237 aa4.18□□□□□ -1.74
CSDE1-209ENST00000525132 DEFB129Q9H1M3 183 aa4.18□□□□□ -1.74
CSDE1-209ENST00000525132 CAPN10Q9HC96 672 aa4.18□□□□□ -1.74
CSDE1-209ENST00000525132 GMEB2Q9UKD1 530 aa4.18□□□□□ -1.74
CSDE1-209ENST00000525132 MTUS1Q9ULD2 1270 aa4.18□□□□□ -1.74
CSDE1-209ENST00000525132 COL4A1P02462 1669 aa4.18□□□□□ -1.74
CSDE1-209ENST00000525132 NCAPD2Q15021 1401 aa4.18□□□□□ -1.74
CSDE1-209ENST00000525132 BIRC6Q9NR09 4857 aa4.18□□□□□ -1.74
CSDE1-209ENST00000525132 NID2Q14112 1375 aa4.17□□□□□ -1.74
CSDE1-209ENST00000525132 CEMIPQ8WUJ3 1361 aa4.17□□□□□ -1.74
CSDE1-209ENST00000525132 MED13LQ71F56 2210 aa4.17□□□□□ -1.74
CSDE1-209ENST00000525132 SLC22A31A6NKX4 558 aa4.17□□□□□ -1.74
CSDE1-209ENST00000525132 UPK3BL1B0FP48 263 aa4.17□□□□□ -1.74
CSDE1-209ENST00000525132 UPK3BL2E5RIL1 263 aa4.17□□□□□ -1.74
CSDE1-209ENST00000525132 TNFRSF10CO14798 259 aa4.17□□□□□ -1.74
CSDE1-209ENST00000525132 TLR3O15455 904 aaKnown RBP4.17□□□□□ -1.74
CSDE1-209ENST00000525132 UBOX5O94941 541 aa4.17□□□□□ -1.74
CSDE1-209ENST00000525132 CEACAM5P06731 702 aa4.17□□□□□ -1.74
CSDE1-209ENST00000525132 CYP19A1P11511 503 aaPredicted RBP4.17□□□□□ -1.74
CSDE1-209ENST00000525132 ATP2B1P20020 1258 aa4.17□□□□□ -1.74
CSDE1-209ENST00000525132 CYP2B6P20813 491 aa4.17□□□□□ -1.74
CSDE1-209ENST00000525132 GTF2F1P35269 517 aaKnown RBP eCLIP4.17□□□□□ -1.741e-7■■■■■ 29.4
CSDE1-209ENST00000525132 ETF1P62495 437 aaKnown RBP4.17□□□□□ -1.74
CSDE1-209ENST00000525132 PDE4BQ07343 736 aa4.17□□□□□ -1.74
CSDE1-209ENST00000525132 CWF19L2Q2TBE0 894 aaKnown RBP4.17□□□□□ -1.74
CSDE1-209ENST00000525132 CRY2Q49AN0 593 aa4.17□□□□□ -1.74
CSDE1-209ENST00000525132 CYP27C1Q4G0S4 372 aa4.17□□□□□ -1.74
CSDE1-209ENST00000525132 TCEAL5Q5H9L2 206 aa4.17□□□□□ -1.74
CSDE1-209ENST00000525132 LCE5AQ5TCM9 118 aa4.17□□□□□ -1.74
CSDE1-209ENST00000525132 ANKRD23Q86SG2 305 aa4.17□□□□□ -1.74
CSDE1-209ENST00000525132 RPAINQ86UA6 219 aa4.17□□□□□ -1.74
CSDE1-209ENST00000525132 ZNF654Q8IZM8 581 aa4.17□□□□□ -1.74
CSDE1-209ENST00000525132 TMEM199Q8N511 208 aa4.17□□□□□ -1.74
CSDE1-209ENST00000525132 SLC43A3Q8NBI5 491 aa4.17□□□□□ -1.74
CSDE1-209ENST00000525132 DHX38Q92620 1227 aaKnown RBP4.17□□□□□ -1.74
CSDE1-209ENST00000525132 LPAR1Q92633 364 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms