RNA–Protein interactions for RNA: ENST00000523483.5

SDCBP-212, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 3,589 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-212ENST00000523483 ASGR1P07306 291 aa10.31□□□□□ -0.76
SDCBP-212ENST00000523483 XRCC6P12956 609 aaKnown RBP eCLIP10.31□□□□□ -0.76
SDCBP-212ENST00000523483 PMS1P54277 932 aaKnown RBP10.31□□□□□ -0.76
SDCBP-212ENST00000523483 ZNF200P98182 395 aaPredicted RBP10.31□□□□□ -0.76
SDCBP-212ENST00000523483 MFSD10Q14728 455 aa10.31□□□□□ -0.76
SDCBP-212ENST00000523483 GRIK4Q16099 956 aa10.31□□□□□ -0.76
SDCBP-212ENST00000523483 KCNA10Q16322 511 aa10.31□□□□□ -0.76
SDCBP-212ENST00000523483 AFAP1L1Q8TED9 768 aa10.31□□□□□ -0.76
SDCBP-212ENST00000523483 PPP1R3GB7ZBB8 358 aa10.31□□□□□ -0.76
SDCBP-212ENST00000523483 CLIC2O15247 247 aa10.31□□□□□ -0.76
SDCBP-212ENST00000523483 LGR5O75473 907 aa10.31□□□□□ -0.76
SDCBP-212ENST00000523483 STBD1O95210 358 aa10.31□□□□□ -0.76
SDCBP-212ENST00000523483 GUCY2CP25092 1073 aa10.31□□□□□ -0.76
SDCBP-212ENST00000523483 MATR3P43243 847 aaKnown RBP eCLIP10.31□□□□□ -0.76
SDCBP-212ENST00000523483 SLC26A2P50443 739 aa10.31□□□□□ -0.76
SDCBP-212ENST00000523483 DNM2P50570 870 aa10.31□□□□□ -0.76
SDCBP-212ENST00000523483 PTPN21Q16825 1174 aa10.31□□□□□ -0.76
SDCBP-212ENST00000523483 RNF180Q86T96 592 aa10.31□□□□□ -0.76
SDCBP-212ENST00000523483 DEPTORQ8TB45 409 aa10.31□□□□□ -0.76
SDCBP-212ENST00000523483 PXYLP1Q8TE99 480 aa10.31□□□□□ -0.76
SDCBP-212ENST00000523483 PRPF31Q8WWY3 499 aaKnown RBP10.31□□□□□ -0.76
SDCBP-212ENST00000523483 SAMSN1Q9NSI8 373 aaKnown RBP10.31□□□□□ -0.76
SDCBP-212ENST00000523483 NOD1Q9Y239 953 aa10.31□□□□□ -0.76
SDCBP-212ENST00000523483 PTPN22Q9Y2R2 807 aa10.31□□□□□ -0.76
SDCBP-212ENST00000523483 HARSP12081 509 aaKnown RBP10.31□□□□□ -0.76
SDCBP-212ENST00000523483 CSGALNACT2Q8N6G5 542 aa10.31□□□□□ -0.76
SDCBP-212ENST00000523483 RNF149Q8NC42 400 aa10.31□□□□□ -0.76
SDCBP-212ENST00000523483 BSNDQ8WZ55 320 aa10.31□□□□□ -0.76
SDCBP-212ENST00000523483 EMID1Q96A84 441 aaPredicted RBP10.31□□□□□ -0.76
SDCBP-212ENST00000523483 TRIM5Q9C035 493 aa10.31□□□□□ -0.76
SDCBP-212ENST00000523483 SUCLA2Q9P2R7 463 aaPredicted RBP10.31□□□□□ -0.76
SDCBP-212ENST00000523483 ODF2LQ9ULJ1 636 aa10.31□□□□□ -0.76
SDCBP-212ENST00000523483 MGAMO43451 1857 aa10.3□□□□□ -0.76
SDCBP-212ENST00000523483 DENND3A2RUS2 1198 aa10.3□□□□□ -0.76
SDCBP-212ENST00000523483 SERPINC1P01008 464 aa10.3□□□□□ -0.76
SDCBP-212ENST00000523483 SMIM10L2AP0DMW4 78 aa10.3□□□□□ -0.76
SDCBP-212ENST00000523483 SMIM10L2BP0DMW5 78 aa10.3□□□□□ -0.76
SDCBP-212ENST00000523483 ATP1A3P13637 1013 aa10.3□□□□□ -0.76
SDCBP-212ENST00000523483 PLS3P13797 630 aa10.3□□□□□ -0.76
SDCBP-212ENST00000523483 GAP43P17677 238 aa10.3□□□□□ -0.76
SDCBP-212ENST00000523483 NPTX2P47972 431 aa10.3□□□□□ -0.76
SDCBP-212ENST00000523483 PSEN2P49810 448 aa10.3□□□□□ -0.76
SDCBP-212ENST00000523483 MAPK7Q13164 816 aa10.3□□□□□ -0.76
SDCBP-212ENST00000523483 DHX40Q8IX18 779 aaKnown RBP10.3□□□□□ -0.76
SDCBP-212ENST00000523483 RETREG2Q8NC44 543 aa10.3□□□□□ -0.76
SDCBP-212ENST00000523483 LMBR1Q8WVP7 490 aa10.3□□□□□ -0.76
SDCBP-212ENST00000523483 PSPC1Q8WXF1 523 aaKnown RBP10.3□□□□□ -0.76
SDCBP-212ENST00000523483 KCND2Q9NZV8 630 aa10.3□□□□□ -0.76
SDCBP-212ENST00000523483 HDAC6Q9UBN7 1215 aa10.3□□□□□ -0.76
SDCBP-212ENST00000523483 SMTNL1A8MU46 457 aa10.3□□□□□ -0.76
SDCBP-212ENST00000523483 INO80B-WBP1J3KQ70 363 aa10.3□□□□□ -0.76
SDCBP-212ENST00000523483 ZEB2O60315 1214 aa10.3□□□□□ -0.76
SDCBP-212ENST00000523483 MRE11P49959 708 aa10.3□□□□□ -0.76
SDCBP-212ENST00000523483 PURAQ00577 322 aaKnown RBP10.3□□□□□ -0.76
SDCBP-212ENST00000523483 HAUS6Q7Z4H7 955 aa10.3□□□□□ -0.76
SDCBP-212ENST00000523483 ADSSL1Q8N142 457 aa10.3□□□□□ -0.76
SDCBP-212ENST00000523483 KCTD17Q8N5Z5 321 aa10.3□□□□□ -0.76
SDCBP-212ENST00000523483 RDH13Q8NBN7 331 aa10.3□□□□□ -0.76
SDCBP-212ENST00000523483 ASAP3Q8TDY4 903 aa10.3□□□□□ -0.76
SDCBP-212ENST00000523483 SCFD1Q8WVM8 642 aa10.3□□□□□ -0.76
SDCBP-212ENST00000523483 KIFAP3Q92845 792 aa10.3□□□□□ -0.76
SDCBP-212ENST00000523483 SRRTQ9BXP5 876 aaKnown RBP10.3□□□□□ -0.76
SDCBP-212ENST00000523483 INO80BQ9C086 356 aaPredicted RBP10.3□□□□□ -0.76
SDCBP-212ENST00000523483 TMOD1P28289 359 aa10.3□□□□□ -0.76
SDCBP-212ENST00000523483 NLRP7Q8WX94 980 aa10.3□□□□□ -0.76
SDCBP-212ENST00000523483 KAT2BQ92831 832 aa10.3□□□□□ -0.76
SDCBP-212ENST00000523483 P2RX5Q93086 422 aa10.3□□□□□ -0.76
SDCBP-212ENST00000523483 MAP7D2Q96T17 732 aa10.3□□□□□ -0.76
SDCBP-212ENST00000523483 TSG101Q99816 390 aa10.3□□□□□ -0.76
SDCBP-212ENST00000523483 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.3□□□□□ -0.768e-21■■■■■ 43.8
SDCBP-212ENST00000523483 DHX33Q9H6R0 707 aaKnown RBP10.3□□□□□ -0.76
SDCBP-212ENST00000523483 TISP43B9A030 160 aa10.29□□□□□ -0.76
SDCBP-212ENST00000523483 F2P00734 622 aa10.29□□□□□ -0.76
SDCBP-212ENST00000523483 CYP2J2P51589 502 aa10.29□□□□□ -0.76
SDCBP-212ENST00000523483 NBPF20Q3BBV1 942 aa10.29□□□□□ -0.76
SDCBP-212ENST00000523483 CEP135Q66GS9 1140 aa10.29□□□□□ -0.76
SDCBP-212ENST00000523483 ANKRD40Q6AI12 368 aa10.29□□□□□ -0.76
SDCBP-212ENST00000523483 NFRKBQ6P4R8 1299 aa10.29□□□□□ -0.76
SDCBP-212ENST00000523483 STXBP4Q6ZWJ1 553 aa10.29□□□□□ -0.76
SDCBP-212ENST00000523483 CDR2LQ86X02 465 aaPredicted RBP10.29□□□□□ -0.76
SDCBP-212ENST00000523483 DRC7Q8IY82 874 aa10.29□□□□□ -0.76
SDCBP-212ENST00000523483 TCHPQ9BT92 498 aa10.29□□□□□ -0.76
SDCBP-212ENST00000523483 NIFKQ9BYG3 293 aaKnown RBP10.29□□□□□ -0.76
SDCBP-212ENST00000523483 PCIF1Q9H4Z3 704 aa10.29□□□□□ -0.76
SDCBP-212ENST00000523483 PCDHB13Q9Y5F0 798 aa10.29□□□□□ -0.76
SDCBP-212ENST00000523483 LRRC37A2A6NM11 1700 aa10.29□□□□□ -0.76
SDCBP-212ENST00000523483 HNRNPDLO14979 420 aaKnown RBP10.29□□□□□ -0.76
SDCBP-212ENST00000523483 KIF20AO95235 890 aa10.29□□□□□ -0.76
SDCBP-212ENST00000523483 CTSHP09668 335 aa10.29□□□□□ -0.76
SDCBP-212ENST00000523483 CYP2C9P11712 490 aa10.29□□□□□ -0.76
SDCBP-212ENST00000523483 ATN1P54259 1190 aaPredicted RBP10.29□□□□□ -0.76
SDCBP-212ENST00000523483 GJA9P57773 515 aa10.29□□□□□ -0.76
SDCBP-212ENST00000523483 PSMD2Q13200 908 aa10.29□□□□□ -0.76
SDCBP-212ENST00000523483 IQCB1Q15051 598 aa10.29□□□□□ -0.76
SDCBP-212ENST00000523483 KIZQ2M2Z5 673 aa10.29□□□□□ -0.76
SDCBP-212ENST00000523483 GLT1D1Q96MS3 346 aa10.29□□□□□ -0.76
SDCBP-212ENST00000523483 MTG1Q9BT17 334 aaPredicted RBP10.29□□□□□ -0.76
SDCBP-212ENST00000523483 ANKFY1Q9P2R3 1169 aa10.29□□□□□ -0.76
SDCBP-212ENST00000523483 ZBTB42B2RXF5 422 aa10.29□□□□□ -0.76
SDCBP-212ENST00000523483 TREHO43280 583 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms