RNA–Protein interactions for RNA: ENST00000522414.1

PVT1-213, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 654 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-213ENST00000522414 hCG_1642624A0A1W2PR95 340 aa9.25□□□□□ -0.93
PVT1-213ENST00000522414 M0R082 166 aa9.25□□□□□ -0.93
PVT1-213ENST00000522414 F2P00734 622 aa9.25□□□□□ -0.93
PVT1-213ENST00000522414 TGFB3P10600 412 aa9.25□□□□□ -0.93
PVT1-213ENST00000522414 RXRAP19793 462 aa9.25□□□□□ -0.93
PVT1-213ENST00000522414 CCND2P30279 289 aa9.25□□□□□ -0.93
PVT1-213ENST00000522414 DEFB103AP81534 67 aa9.25□□□□□ -0.93
PVT1-213ENST00000522414 TFF2Q03403 129 aa9.25□□□□□ -0.93
PVT1-213ENST00000522414 MBTPS1Q14703 1052 aa9.25□□□□□ -0.93
PVT1-213ENST00000522414 TRIM71Q2Q1W2 868 aaKnown RBP9.25□□□□□ -0.93
PVT1-213ENST00000522414 FAM117BQ6P1L5 589 aa9.25□□□□□ -0.93
PVT1-213ENST00000522414 USP17L6PQ6QN14 398 aa9.25□□□□□ -0.93
PVT1-213ENST00000522414 RAB11FIP4Q86YS3 637 aa9.25□□□□□ -0.93
PVT1-213ENST00000522414 MB21D2Q8IYB1 491 aaPredicted RBP9.25□□□□□ -0.93
PVT1-213ENST00000522414 CCDC82Q8N4S0 544 aa9.25□□□□□ -0.93
PVT1-213ENST00000522414 ZNF417Q8TAU3 575 aa9.25□□□□□ -0.93
PVT1-213ENST00000522414 CAGE1Q8TC20 777 aa9.25□□□□□ -0.93
PVT1-213ENST00000522414 ATXN2LQ8WWM7 1075 aaKnown RBP9.25□□□□□ -0.93
PVT1-213ENST00000522414 ZNF587Q96SQ5 575 aaPredicted RBP9.25□□□□□ -0.93
PVT1-213ENST00000522414 OSBPL7Q9BZF2 842 aa9.25□□□□□ -0.93
PVT1-213ENST00000522414 MLXIPQ9HAP2 919 aa9.25□□□□□ -0.93
PVT1-213ENST00000522414 LY9Q9HBG7 655 aa9.25□□□□□ -0.93
PVT1-213ENST00000522414 MTCH2Q9Y6C9 303 aa9.25□□□□□ -0.93
PVT1-213ENST00000522414 GBF1Q92538 1859 aa9.25□□□□□ -0.93
PVT1-213ENST00000522414 KIF28PB7ZC32 967 aa9.24□□□□□ -0.93
PVT1-213ENST00000522414 H3BRB1 525 aa9.24□□□□□ -0.93
PVT1-213ENST00000522414 CDK2AP1O14519 115 aa9.24□□□□□ -0.93
PVT1-213ENST00000522414 PRC1O43663 620 aa9.24□□□□□ -0.93
PVT1-213ENST00000522414 PLEKHA8P1O95397 391 aa9.24□□□□□ -0.93
PVT1-213ENST00000522414 HOXD8P13378 290 aaPredicted RBP9.24□□□□□ -0.93
PVT1-213ENST00000522414 UBA1P22314 1058 aaKnown RBP9.24□□□□□ -0.93
PVT1-213ENST00000522414 THPOP40225 353 aa9.24□□□□□ -0.93
PVT1-213ENST00000522414 WDR5P61964 334 aaKnown RBP9.24□□□□□ -0.93
PVT1-213ENST00000522414 MRPS5P82675 430 aaKnown RBP9.24□□□□□ -0.93
PVT1-213ENST00000522414 SEMA3FQ13275 785 aa9.24□□□□□ -0.93
PVT1-213ENST00000522414 PTK7Q13308 1070 aa9.24□□□□□ -0.93
PVT1-213ENST00000522414 SART3Q15020 963 aaKnown RBP9.24□□□□□ -0.93
PVT1-213ENST00000522414 GRIK4Q16099 956 aa9.24□□□□□ -0.93
PVT1-213ENST00000522414 KCNV1Q6PIU1 500 aa9.24□□□□□ -0.93
PVT1-213ENST00000522414 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.24□□□□□ -0.93
PVT1-213ENST00000522414 CYFIP1Q7L576 1253 aa9.24□□□□□ -0.93
PVT1-213ENST00000522414 ZNF654Q8IZM8 581 aa9.24□□□□□ -0.93
PVT1-213ENST00000522414 SRBD1Q8N5C6 995 aaKnown RBP9.24□□□□□ -0.93
PVT1-213ENST00000522414 NECAB3Q96P71 396 aaPredicted RBP9.24□□□□□ -0.93
PVT1-213ENST00000522414 SLC9A7Q96T83 725 aa9.24□□□□□ -0.93
PVT1-213ENST00000522414 LRRC2Q9BYS8 371 aa9.24□□□□□ -0.93
PVT1-213ENST00000522414 RNPEPQ9H4A4 650 aa9.24□□□□□ -0.93
PVT1-213ENST00000522414 TUT1Q9H6E5 874 aaKnown RBP9.24□□□□□ -0.93
PVT1-213ENST00000522414 A6NJY4 79 aa9.23□□□□□ -0.93
PVT1-213ENST00000522414 SPDYE3A6NKU9 549 aa9.23□□□□□ -0.93
PVT1-213ENST00000522414 ADARB2-AS1A8MUL3 147 aa9.23□□□□□ -0.93
PVT1-213ENST00000522414 MEIS2O14770 477 aa9.23□□□□□ -0.93
PVT1-213ENST00000522414 SLC27A2O14975 620 aa9.23□□□□□ -0.93
PVT1-213ENST00000522414 TREHO43280 583 aa9.23□□□□□ -0.93
PVT1-213ENST00000522414 BAIAP3O94812 1187 aa9.23□□□□□ -0.93
PVT1-213ENST00000522414 ALBP02768 609 aa9.23□□□□□ -0.93
PVT1-213ENST00000522414 CXCL10P02778 98 aa9.23□□□□□ -0.93
PVT1-213ENST00000522414 ALAS2P22557 587 aa9.23□□□□□ -0.93
PVT1-213ENST00000522414 TXLNAP40222 546 aa9.23□□□□□ -0.93
PVT1-213ENST00000522414 KCNJ6P48051 423 aa9.23□□□□□ -0.93
PVT1-213ENST00000522414 SP4Q02446 784 aa9.23□□□□□ -0.93
PVT1-213ENST00000522414 TRAF1Q13077 416 aa9.23□□□□□ -0.93
PVT1-213ENST00000522414 UTP14CQ5TAP6 766 aaKnown RBP9.23□□□□□ -0.93
PVT1-213ENST00000522414 CNKSR3Q6P9H4 555 aa9.23□□□□□ -0.93
PVT1-213ENST00000522414 NFXL1Q6ZNB6 911 aa9.23□□□□□ -0.93
PVT1-213ENST00000522414 KRTAP19-1Q8IUB9 90 aa9.23□□□□□ -0.93
PVT1-213ENST00000522414 SAMD3Q8N6K7 520 aa9.23□□□□□ -0.93
PVT1-213ENST00000522414 DBF4BQ8NFT6 615 aa9.23□□□□□ -0.93
PVT1-213ENST00000522414 CTCFLQ8NI51 663 aaPredicted RBP9.23□□□□□ -0.93
PVT1-213ENST00000522414 ATP6V0A1Q93050 837 aa9.23□□□□□ -0.93
PVT1-213ENST00000522414 RRP36Q96EU6 259 aaKnown RBP9.23□□□□□ -0.93
PVT1-213ENST00000522414 KATNAL1Q9BW62 490 aa9.23□□□□□ -0.93
PVT1-213ENST00000522414 LSG1Q9H089 658 aaKnown RBP9.23□□□□□ -0.93
PVT1-213ENST00000522414 SETD4Q9NVD3 440 aa9.23□□□□□ -0.93
PVT1-213ENST00000522414 THEGQ9P2T0 379 aa9.23□□□□□ -0.93
PVT1-213ENST00000522414 MTUS1Q9ULD2 1270 aa9.23□□□□□ -0.93
PVT1-213ENST00000522414 ABHD14A-ACY1A0A1B0GW23 586 aa9.22□□□□□ -0.93
PVT1-213ENST00000522414 RSPH10B2B2RC85 870 aa9.22□□□□□ -0.93
PVT1-213ENST00000522414 NOP56O00567 594 aaKnown RBP9.22□□□□□ -0.93
PVT1-213ENST00000522414 LPXNO60711 386 aa9.22□□□□□ -0.93
PVT1-213ENST00000522414 ATP9AO75110 1047 aa9.22□□□□□ -0.93
PVT1-213ENST00000522414 LGALS2P05162 132 aa9.22□□□□□ -0.93
PVT1-213ENST00000522414 RSPH10BP0C881 870 aa9.22□□□□□ -0.93
PVT1-213ENST00000522414 SMIM10L2AP0DMW4 78 aa9.22□□□□□ -0.93
PVT1-213ENST00000522414 SMIM10L2BP0DMW5 78 aa9.22□□□□□ -0.93
PVT1-213ENST00000522414 POU3F3P20264 500 aaPredicted RBP9.22□□□□□ -0.93
PVT1-213ENST00000522414 ICAM3P32942 547 aa9.22□□□□□ -0.93
PVT1-213ENST00000522414 MCM5P33992 734 aa9.22□□□□□ -0.93
PVT1-213ENST00000522414 KCNQ1P51787 676 aa9.22□□□□□ -0.93
PVT1-213ENST00000522414 RBL2Q08999 1139 aa9.22□□□□□ -0.93
PVT1-213ENST00000522414 GRB10Q13322 594 aa9.22□□□□□ -0.93
PVT1-213ENST00000522414 IKBKEQ14164 716 aa9.22□□□□□ -0.93
PVT1-213ENST00000522414 NECTIN1Q15223 517 aa9.22□□□□□ -0.93
PVT1-213ENST00000522414 CREB3L3Q68CJ9 461 aa9.22□□□□□ -0.93
PVT1-213ENST00000522414 CASC1Q6TDU7 716 aa9.22□□□□□ -0.93
PVT1-213ENST00000522414 SERINC5Q86VE9 423 aa9.22□□□□□ -0.93
PVT1-213ENST00000522414 TRIM50Q86XT4 487 aa9.22□□□□□ -0.93
PVT1-213ENST00000522414 SMARCC2Q8TAQ2 1214 aa9.22□□□□□ -0.93
PVT1-213ENST00000522414 ADAMTS19Q8TE59 1207 aa9.22□□□□□ -0.93
PVT1-213ENST00000522414 INPP4AQ96PE3 977 aaPredicted RBP9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms