RNA–Protein interactions for RNA: ENST00000515395.5

SSBP2-219, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 2 BASIC

Gene SSBP2, Length 1,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-219ENST00000515395 NFX1Q12986 1120 aaKnown RBP11.38□□□□□ -0.59
SSBP2-219ENST00000515395 STK38Q15208 465 aa11.38□□□□□ -0.59
SSBP2-219ENST00000515395 TMEM143Q96AN5 459 aa11.38□□□□□ -0.59
SSBP2-219ENST00000515395 CALML4Q96GE6 196 aa11.38□□□□□ -0.59
SSBP2-219ENST00000515395 ZBED2Q9BTP6 218 aa11.38□□□□□ -0.59
SSBP2-219ENST00000515395 FTHL17Q9BXU8 183 aa11.38□□□□□ -0.59
SSBP2-219ENST00000515395 GCOM2Q9BZD3 368 aaPredicted RBP11.38□□□□□ -0.59
SSBP2-219ENST00000515395 OSBPL7Q9BZF2 842 aa11.38□□□□□ -0.59
SSBP2-219ENST00000515395 NT5C3AQ9H0P0 336 aa11.38□□□□□ -0.59
SSBP2-219ENST00000515395 CDHR5Q9HBB8 845 aa11.38□□□□□ -0.59
SSBP2-219ENST00000515395 MSRAQ9UJ68 235 aa11.38□□□□□ -0.59
SSBP2-219ENST00000515395 PADI3Q9ULW8 664 aa11.38□□□□□ -0.59
SSBP2-219ENST00000515395 LAMA2P24043 3122 aaKnown RBP11.37□□□□□ -0.59
SSBP2-219ENST00000515395 SOX1O00570 391 aaPredicted RBP11.37□□□□□ -0.59
SSBP2-219ENST00000515395 ASAP2O43150 1006 aa11.37□□□□□ -0.59
SSBP2-219ENST00000515395 EIF4BP23588 611 aaKnown RBP11.37□□□□□ -0.59
SSBP2-219ENST00000515395 MARCKSP29966 332 aaPredicted RBP11.37□□□□□ -0.59
SSBP2-219ENST00000515395 MKRN4PQ13434 485 aaPredicted RBP11.37□□□□□ -0.59
SSBP2-219ENST00000515395 DRP2Q13474 957 aa11.37□□□□□ -0.59
SSBP2-219ENST00000515395 MXD4Q14582 209 aaPredicted RBP11.37□□□□□ -0.59
SSBP2-219ENST00000515395 RAB30Q15771 203 aa11.37□□□□□ -0.59
SSBP2-219ENST00000515395 TCTN1Q2MV58 587 aa11.37□□□□□ -0.59
SSBP2-219ENST00000515395 FAM43BQ6ZT52 329 aaPredicted RBP11.37□□□□□ -0.59
SSBP2-219ENST00000515395 CABP7Q86V35 215 aa11.37□□□□□ -0.59
SSBP2-219ENST00000515395 ZNF410Q86VK4 478 aa11.37□□□□□ -0.59
SSBP2-219ENST00000515395 MYOCDQ8IZQ8 938 aa11.37□□□□□ -0.59
SSBP2-219ENST00000515395 KCTD17Q8N5Z5 321 aa11.37□□□□□ -0.59
SSBP2-219ENST00000515395 MCPH1Q8NEM0 835 aa11.37□□□□□ -0.59
SSBP2-219ENST00000515395 LRCH3Q96II8 777 aa11.37□□□□□ -0.59
SSBP2-219ENST00000515395 ZNF668Q96K58 619 aaPredicted RBP11.37□□□□□ -0.59
SSBP2-219ENST00000515395 NLRP4Q96MN2 994 aa11.37□□□□□ -0.59
SSBP2-219ENST00000515395 USP28Q96RU2 1077 aa11.37□□□□□ -0.59
SSBP2-219ENST00000515395 INO80BQ9C086 356 aaPredicted RBP11.37□□□□□ -0.59
SSBP2-219ENST00000515395 ADAMTS10Q9H324 1103 aa11.37□□□□□ -0.59
SSBP2-219ENST00000515395 AGO3Q9H9G7 860 aaKnown RBP11.37□□□□□ -0.59
SSBP2-219ENST00000515395 COL4A3BPQ9Y5P4 624 aa11.37□□□□□ -0.59
SSBP2-219ENST00000515395 TCHHQ07283 1943 aa11.37□□□□□ -0.59
SSBP2-219ENST00000515395 A0A087WZ62 844 aa11.36□□□□□ -0.59
SSBP2-219ENST00000515395 GRXCR1A8MXD5 290 aa11.36□□□□□ -0.59
SSBP2-219ENST00000515395 SLC26A4O43511 780 aa11.36□□□□□ -0.59
SSBP2-219ENST00000515395 SRGAP2CP0DJJ0 459 aa11.36□□□□□ -0.59
SSBP2-219ENST00000515395 DARSP14868 501 aaKnown RBP11.36□□□□□ -0.59
SSBP2-219ENST00000515395 TXLNAP40222 546 aa11.36□□□□□ -0.59
SSBP2-219ENST00000515395 PKP1Q13835 747 aa11.36□□□□□ -0.59
SSBP2-219ENST00000515395 TFDP1Q14186 410 aa11.36□□□□□ -0.59
SSBP2-219ENST00000515395 SLC39A14Q15043 492 aa11.36□□□□□ -0.59
SSBP2-219ENST00000515395 PTPAQ15257 358 aa11.36□□□□□ -0.59
SSBP2-219ENST00000515395 ECM1Q16610 540 aa11.36□□□□□ -0.59
SSBP2-219ENST00000515395 FOXD4L6Q3SYB3 417 aaPredicted RBP11.36□□□□□ -0.59
SSBP2-219ENST00000515395 ATL3Q6DD88 541 aa11.36□□□□□ -0.59
SSBP2-219ENST00000515395 FAM109BQ6ICB4 259 aaPredicted RBP11.36□□□□□ -0.59
SSBP2-219ENST00000515395 GPR153Q6NV75 609 aa11.36□□□□□ -0.59
SSBP2-219ENST00000515395 PADI6Q6TGC4 694 aa11.36□□□□□ -0.59
SSBP2-219ENST00000515395 FOXD4L3Q6VB84 417 aaPredicted RBP11.36□□□□□ -0.59
SSBP2-219ENST00000515395 TMEM40Q8WWA1 233 aa11.36□□□□□ -0.59
SSBP2-219ENST00000515395 PRPF31Q8WWY3 499 aaKnown RBP11.36□□□□□ -0.59
SSBP2-219ENST00000515395 FDXACB1Q9BRP7 624 aaPredicted RBP11.36□□□□□ -0.59
SSBP2-219ENST00000515395 BHMT2Q9H2M3 363 aa11.36□□□□□ -0.59
SSBP2-219ENST00000515395 TFIP11Q9UBB9 837 aaKnown RBP11.36□□□□□ -0.59
SSBP2-219ENST00000515395 CFAP45Q9UL16 551 aa11.36□□□□□ -0.59
SSBP2-219ENST00000515395 ST3GAL5Q9UNP4 418 aa11.36□□□□□ -0.59
SSBP2-219ENST00000515395 NOC2LQ9Y3T9 749 aaKnown RBP11.36□□□□□ -0.59
SSBP2-219ENST00000515395 SRPRBQ9Y5M8 271 aaKnown RBP11.36□□□□□ -0.59
SSBP2-219ENST00000515395 TTC3P53804 2025 aa11.36□□□□□ -0.59
SSBP2-219ENST00000515395 DENND3A2RUS2 1198 aa11.35□□□□□ -0.59
SSBP2-219ENST00000515395 E9PMD0 336 aa11.35□□□□□ -0.59
SSBP2-219ENST00000515395 TLL1O43897 1013 aa11.35□□□□□ -0.59
SSBP2-219ENST00000515395 UPP2O95045 317 aa11.35□□□□□ -0.59
SSBP2-219ENST00000515395 EYA4O95677 639 aa11.35□□□□□ -0.59
SSBP2-219ENST00000515395 SSBP05455 408 aaKnown RBP eCLIP11.35□□□□□ -0.59
SSBP2-219ENST00000515395 ZSCAN20P17040 1043 aaPredicted RBP11.35□□□□□ -0.59
SSBP2-219ENST00000515395 SFPQP23246 707 aaKnown RBP eCLIP11.35□□□□□ -0.59
SSBP2-219ENST00000515395 DNAJB2P25686 324 aa11.35□□□□□ -0.59
SSBP2-219ENST00000515395 ANP32AP39687 249 aaKnown RBP11.35□□□□□ -0.59
SSBP2-219ENST00000515395 PHKA2P46019 1235 aa11.35□□□□□ -0.59
SSBP2-219ENST00000515395 NASPP49321 788 aaPredicted RBP11.35□□□□□ -0.59
SSBP2-219ENST00000515395 DEFB103AP81534 67 aa11.35□□□□□ -0.59
SSBP2-219ENST00000515395 LAMTOR4Q0VGL1 99 aa11.35□□□□□ -0.59
SSBP2-219ENST00000515395 MYO9BQ13459 2157 aa11.35□□□□□ -0.59
SSBP2-219ENST00000515395 HYIQ5T013 277 aa11.35□□□□□ -0.59
SSBP2-219ENST00000515395 FAM102BQ5T8I3 360 aa11.35□□□□□ -0.59
SSBP2-219ENST00000515395 ZNF697Q5TEC3 545 aa11.35□□□□□ -0.59
SSBP2-219ENST00000515395 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.35□□□□□ -0.591e-8■■■■□ 21.4
SSBP2-219ENST00000515395 MAEAQ7L5Y9 396 aa11.35□□□□□ -0.59
SSBP2-219ENST00000515395 FAM228AQ86W67 206 aa11.35□□□□□ -0.59
SSBP2-219ENST00000515395 KSR1Q8IVT5 923 aa11.35□□□□□ -0.59
SSBP2-219ENST00000515395 HERC6Q8IVU3 1022 aa11.35□□□□□ -0.59
SSBP2-219ENST00000515395 KRI1Q8N9T8 703 aaKnown RBP11.35□□□□□ -0.59
SSBP2-219ENST00000515395 PLIN2Q99541 437 aa11.35□□□□□ -0.59
SSBP2-219ENST00000515395 MMTAG2Q9BU76 263 aaKnown RBP11.35□□□□□ -0.59
SSBP2-219ENST00000515395 PBX4Q9BYU1 374 aa11.35□□□□□ -0.59
SSBP2-219ENST00000515395 CSRNP2Q9H175 543 aa11.35□□□□□ -0.59
SSBP2-219ENST00000515395 ERVK-5Q9HDB9 667 aa11.35□□□□□ -0.59
SSBP2-219ENST00000515395 XPNPEP1Q9NQW7 623 aa11.35□□□□□ -0.59
SSBP2-219ENST00000515395 CCDC39Q9UFE4 941 aa11.35□□□□□ -0.59
SSBP2-219ENST00000515395 FBXO2Q9UK22 296 aaPredicted RBP11.35□□□□□ -0.59
SSBP2-219ENST00000515395 PCDHA11Q9Y5I1 949 aa11.35□□□□□ -0.59
SSBP2-219ENST00000515395 ATP6V1DQ9Y5K8 247 aa11.35□□□□□ -0.59
SSBP2-219ENST00000515395 ENPP3O14638 875 aa11.34□□□□□ -0.59
SSBP2-219ENST00000515395 SPTLC2O15270 562 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms