RNA–Protein interactions for RNA: ENST00000509876.5

PHF3-210, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 7,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-210ENST00000509876 CYP2C19P33261 490 aa5.57□□□□□ -1.52
PHF3-210ENST00000509876 SEMA3FQ13275 785 aa5.57□□□□□ -1.52
PHF3-210ENST00000509876 PKN2Q16513 984 aaKnown RBP5.57□□□□□ -1.52
PHF3-210ENST00000509876 CCDC14Q49A88 953 aa5.57□□□□□ -1.52
PHF3-210ENST00000509876 FAM117BQ6P1L5 589 aa5.57□□□□□ -1.52
PHF3-210ENST00000509876 YAF2Q8IY57 180 aa5.57□□□□□ -1.52
PHF3-210ENST00000509876 HEXIM2Q96MH2 286 aaKnown RBP5.57□□□□□ -1.52
PHF3-210ENST00000509876 YME1L1Q96TA2 773 aa5.57□□□□□ -1.52
PHF3-210ENST00000509876 MSRAQ9UJ68 235 aa5.57□□□□□ -1.52
PHF3-210ENST00000509876 NRAPQ86VF7 1730 aa5.57□□□□□ -1.52
PHF3-210ENST00000509876 MSH4O15457 936 aa5.57□□□□□ -1.52
PHF3-210ENST00000509876 AOC2O75106 756 aa5.57□□□□□ -1.52
PHF3-210ENST00000509876 ZNF286BP0CG31 522 aa5.57□□□□□ -1.52
PHF3-210ENST00000509876 CPB1P15086 417 aa5.57□□□□□ -1.52
PHF3-210ENST00000509876 SKIDA1Q1XH10 827 aa5.57□□□□□ -1.52
PHF3-210ENST00000509876 ZNF699Q32M78 642 aa5.57□□□□□ -1.52
PHF3-210ENST00000509876 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.57□□□□□ -1.52
PHF3-210ENST00000509876 FAM213AQ9BRX8 229 aa5.57□□□□□ -1.52
PHF3-210ENST00000509876 THAP9Q9H5L6 903 aa5.57□□□□□ -1.52
PHF3-210ENST00000509876 ZCCHC17Q9NP64 241 aaKnown RBP5.57□□□□□ -1.52
PHF3-210ENST00000509876 CYP26B1Q9NR63 512 aa5.57□□□□□ -1.52
PHF3-210ENST00000509876 FAM207AQ9NSI2 230 aaPredicted RBP5.57□□□□□ -1.52
PHF3-210ENST00000509876 PAXBP1Q9Y5B6 917 aa5.57□□□□□ -1.52
PHF3-210ENST00000509876 SALL3Q9BXA9 1300 aa5.57□□□□□ -1.52
PHF3-210ENST00000509876 UBE4BO95155 1302 aa5.57□□□□□ -1.52
PHF3-210ENST00000509876 NSFP46459 744 aaKnown RBP5.57□□□□□ -1.52
PHF3-210ENST00000509876 HADHQ16836 314 aaKnown RBP5.57□□□□□ -1.52
PHF3-210ENST00000509876 TAF2Q6P1X5 1199 aa5.57□□□□□ -1.52
PHF3-210ENST00000509876 TRIM50Q86XT4 487 aa5.57□□□□□ -1.52
PHF3-210ENST00000509876 SYCE1Q8N0S2 351 aa5.57□□□□□ -1.52
PHF3-210ENST00000509876 MICALL1Q8N3F8 863 aa5.57□□□□□ -1.52
PHF3-210ENST00000509876 KIF18AQ8NI77 898 aa5.57□□□□□ -1.52
PHF3-210ENST00000509876 RNF139Q8WU17 664 aa5.57□□□□□ -1.52
PHF3-210ENST00000509876 ZNF668Q96K58 619 aaPredicted RBP5.57□□□□□ -1.52
PHF3-210ENST00000509876 COLEC11Q9BWP8 271 aa5.57□□□□□ -1.52
PHF3-210ENST00000509876 A1CFQ9NQ94 594 aaKnown RBP5.57□□□□□ -1.52
PHF3-210ENST00000509876 SNCAIPQ9Y6H5 919 aa5.57□□□□□ -1.52
PHF3-210ENST00000509876 ASTN2O75129 1339 aaPredicted RBP5.57□□□□□ -1.52
PHF3-210ENST00000509876 IL18RAPO95256 599 aa5.57□□□□□ -1.52
PHF3-210ENST00000509876 CCNE1P24864 410 aa5.57□□□□□ -1.52
PHF3-210ENST00000509876 U2AF2P26368 475 aaKnown RBP eCLIP5.57□□□□□ -1.521e-6■■□□□ 12.3
PHF3-210ENST00000509876 FXR2P51116 673 aaKnown RBP eCLIP5.57□□□□□ -1.526e-7■■□□□ 14.4
PHF3-210ENST00000509876 RAB27AP51159 221 aa5.57□□□□□ -1.52
PHF3-210ENST00000509876 KRT81Q14533 505 aa5.57□□□□□ -1.52
PHF3-210ENST00000509876 CLUL1Q15846 466 aa5.57□□□□□ -1.52
PHF3-210ENST00000509876 LY6KQ17RY6 165 aa5.57□□□□□ -1.52
PHF3-210ENST00000509876 MUM1L1Q5H9M0 696 aa5.57□□□□□ -1.52
PHF3-210ENST00000509876 RRAGAQ7L523 313 aa5.57□□□□□ -1.52
PHF3-210ENST00000509876 NAP1L3Q99457 506 aaPredicted RBP5.57□□□□□ -1.52
PHF3-210ENST00000509876 UBN1Q9NPG3 1134 aa5.57□□□□□ -1.52
PHF3-210ENST00000509876 GJB4Q9NTQ9 266 aa5.57□□□□□ -1.52
PHF3-210ENST00000509876 RGL1Q9NZL6 768 aa5.57□□□□□ -1.52
PHF3-210ENST00000509876 SLC8A2Q9UPR5 921 aa5.57□□□□□ -1.52
PHF3-210ENST00000509876 LOC102724159A0A0B4J2E5 919 aa5.56□□□□□ -1.52
PHF3-210ENST00000509876 CD4P01730 458 aa5.56□□□□□ -1.52
PHF3-210ENST00000509876 ALDH7A1P49419 539 aaKnown RBP5.56□□□□□ -1.52
PHF3-210ENST00000509876 PWP2Q15269 919 aaKnown RBP5.56□□□□□ -1.52
PHF3-210ENST00000509876 GRIK4Q16099 956 aa5.56□□□□□ -1.52
PHF3-210ENST00000509876 HAUS6Q7Z4H7 955 aa5.56□□□□□ -1.52
PHF3-210ENST00000509876 C7orf43Q8WVR3 580 aa5.56□□□□□ -1.52
PHF3-210ENST00000509876 CCDC114Q96M63 670 aa5.56□□□□□ -1.52
PHF3-210ENST00000509876 ZMYND15Q9H091 742 aa5.56□□□□□ -1.52
PHF3-210ENST00000509876 CYP39A1Q9NYL5 469 aa5.56□□□□□ -1.52
PHF3-210ENST00000509876 AGO2Q9UKV8 859 aaKnown RBP5.56□□□□□ -1.52
PHF3-210ENST00000509876 ATP2A1O14983 1001 aa5.56□□□□□ -1.52
PHF3-210ENST00000509876 ADCYAP1R1P41586 468 aa5.56□□□□□ -1.52
PHF3-210ENST00000509876 SNW1Q13573 536 aaKnown RBP5.56□□□□□ -1.52
PHF3-210ENST00000509876 MAN2A1Q16706 1144 aa5.56□□□□□ -1.52
PHF3-210ENST00000509876 NFRKBQ6P4R8 1299 aa5.56□□□□□ -1.52
PHF3-210ENST00000509876 HVCN1Q96D96 273 aa5.56□□□□□ -1.52
PHF3-210ENST00000509876 DEFB118Q96PH6 123 aa5.56□□□□□ -1.52
PHF3-210ENST00000509876 SEZ6LQ9BYH1 1024 aa5.56□□□□□ -1.52
PHF3-210ENST00000509876 TYW1Q9NV66 732 aaKnown RBP5.56□□□□□ -1.52
PHF3-210ENST00000509876 USTQ9Y2C2 406 aa5.56□□□□□ -1.52
PHF3-210ENST00000509876 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.56□□□□□ -1.52
PHF3-210ENST00000509876 ROBO3Q96MS0 1386 aa5.56□□□□□ -1.52
PHF3-210ENST00000509876 GOLGA6CA6NDK9 693 aa5.56□□□□□ -1.52
PHF3-210ENST00000509876 GOLGA6BA6NDN3 693 aa5.56□□□□□ -1.52
PHF3-210ENST00000509876 H3BRB1 525 aa5.56□□□□□ -1.52
PHF3-210ENST00000509876 TLR2O60603 784 aa5.56□□□□□ -1.52
PHF3-210ENST00000509876 PPFIA4O75335 1185 aa5.56□□□□□ -1.52
PHF3-210ENST00000509876 GOLGA6DP0CG33 693 aa5.56□□□□□ -1.52
PHF3-210ENST00000509876 FERP16591 822 aa5.56□□□□□ -1.52
PHF3-210ENST00000509876 SNRPFP62306 86 aaKnown RBP5.56□□□□□ -1.52
PHF3-210ENST00000509876 TMEM132BQ14DG7 1078 aa5.56□□□□□ -1.52
PHF3-210ENST00000509876 ZRSR2Q15696 482 aaKnown RBP5.56□□□□□ -1.52
PHF3-210ENST00000509876 ATF7IP2Q5U623 682 aa5.56□□□□□ -1.52
PHF3-210ENST00000509876 C1orf228Q6PIY5 440 aa5.56□□□□□ -1.52
PHF3-210ENST00000509876 CTU1Q7Z7A3 348 aaKnown RBP5.56□□□□□ -1.52
PHF3-210ENST00000509876 DEFB128Q7Z7B8 93 aa5.56□□□□□ -1.52
PHF3-210ENST00000509876 KCNB2Q92953 911 aa5.56□□□□□ -1.52
PHF3-210ENST00000509876 BAG1Q99933 345 aaPredicted RBP5.56□□□□□ -1.52
PHF3-210ENST00000509876 TUT1Q9H6E5 874 aaKnown RBP5.56□□□□□ -1.52
PHF3-210ENST00000509876 C17orf75Q9HAS0 396 aa5.56□□□□□ -1.52
PHF3-210ENST00000509876 GOLGA6AQ9NYA3 693 aa5.56□□□□□ -1.52
PHF3-210ENST00000509876 EHD2Q9NZN4 543 aa5.56□□□□□ -1.52
PHF3-210ENST00000509876 MAN1B1Q9UKM7 699 aa5.56□□□□□ -1.52
PHF3-210ENST00000509876 XIRP1Q702N8 1843 aaKnown RBP5.56□□□□□ -1.52
PHF3-210ENST00000509876 NR3C1P04150 777 aa5.56□□□□□ -1.52
PHF3-210ENST00000509876 XRCC6P12956 609 aaKnown RBP eCLIP5.56□□□□□ -1.527e-13■■■■■ 31.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms