RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 SFPQP23246 707 aaKnown RBP eCLIP9.39□□□□□ -0.91
PDGFC-205ENST00000506880 EIF4BP23588 611 aaKnown RBP9.39□□□□□ -0.91
PDGFC-205ENST00000506880 ARL2P36404 184 aa9.39□□□□□ -0.91
PDGFC-205ENST00000506880 NAMPTP43490 491 aa9.39□□□□□ -0.91
PDGFC-205ENST00000506880 PHKA2P46019 1235 aa9.39□□□□□ -0.91
PDGFC-205ENST00000506880 ZNF131P52739 623 aa9.39□□□□□ -0.91
PDGFC-205ENST00000506880 SMTNP53814 917 aa9.39□□□□□ -0.91
PDGFC-205ENST00000506880 SLC12A3P55017 1021 aa9.39□□□□□ -0.91
PDGFC-205ENST00000506880 IRX5P78411 483 aaPredicted RBP9.39□□□□□ -0.91
PDGFC-205ENST00000506880 POU5F1Q01860 360 aaKnown RBP9.39□□□□□ -0.91
PDGFC-205ENST00000506880 MGAT3Q09327 533 aa9.39□□□□□ -0.91
PDGFC-205ENST00000506880 GRB10Q13322 594 aa9.39□□□□□ -0.91
PDGFC-205ENST00000506880 PKP1Q13835 747 aa9.39□□□□□ -0.91
PDGFC-205ENST00000506880 CTTNQ14247 550 aaKnown RBP9.39□□□□□ -0.91
PDGFC-205ENST00000506880 FAM187BQ17R55 369 aa9.39□□□□□ -0.91
PDGFC-205ENST00000506880 CNKSR3Q6P9H4 555 aa9.39□□□□□ -0.91
PDGFC-205ENST00000506880 PADI6Q6TGC4 694 aa9.39□□□□□ -0.91
PDGFC-205ENST00000506880 SV2BQ7L1I2 683 aa9.39□□□□□ -0.91
PDGFC-205ENST00000506880 C7orf61Q8IZ16 206 aa9.39□□□□□ -0.91
PDGFC-205ENST00000506880 SEPT8Q92599 483 aa9.39□□□□□ -0.91
PDGFC-205ENST00000506880 RAD54LQ92698 747 aa9.39□□□□□ -0.91
PDGFC-205ENST00000506880 SYMPKQ92797 1274 aaKnown RBP9.39□□□□□ -0.91
PDGFC-205ENST00000506880 HVCN1Q96D96 273 aa9.39□□□□□ -0.91
PDGFC-205ENST00000506880 TIGD1Q96MW7 591 aa9.39□□□□□ -0.91
PDGFC-205ENST00000506880 GDF15Q99988 308 aa9.39□□□□□ -0.91
PDGFC-205ENST00000506880 TRPV6Q9H1D0 765 aa9.39□□□□□ -0.91
PDGFC-205ENST00000506880 ST6GALNAC4Q9H4F1 302 aa9.39□□□□□ -0.91
PDGFC-205ENST00000506880 C1orf112Q9NSG2 853 aa9.39□□□□□ -0.91
PDGFC-205ENST00000506880 KBTBD4Q9NVX7 518 aa9.39□□□□□ -0.91
PDGFC-205ENST00000506880 DACT1Q9NYF0 836 aa9.39□□□□□ -0.91
PDGFC-205ENST00000506880 PCDHA7Q9UN72 937 aa9.39□□□□□ -0.91
PDGFC-205ENST00000506880 COL4A3BPQ9Y5P4 624 aa9.39□□□□□ -0.91
PDGFC-205ENST00000506880 COL4A6Q14031 1691 aa9.39□□□□□ -0.91
PDGFC-205ENST00000506880 TET1Q8NFU7 2136 aa9.38□□□□□ -0.91
PDGFC-205ENST00000506880 TRIM43BA6NCK2 446 aa9.38□□□□□ -0.91
PDGFC-205ENST00000506880 SLFN14P0C7P3 912 aa9.38□□□□□ -0.91
PDGFC-205ENST00000506880 PLA2G4BP0C869 781 aa9.38□□□□□ -0.91
PDGFC-205ENST00000506880 PRKCSHP14314 528 aaPredicted RBP9.38□□□□□ -0.91
PDGFC-205ENST00000506880 MARCKSP29966 332 aaPredicted RBP9.38□□□□□ -0.91
PDGFC-205ENST00000506880 THPOP40225 353 aa9.38□□□□□ -0.91
PDGFC-205ENST00000506880 STAT6P42226 847 aa9.38□□□□□ -0.91
PDGFC-205ENST00000506880 GPC3P51654 580 aa9.38□□□□□ -0.91
PDGFC-205ENST00000506880 SNRPFP62306 86 aaKnown RBP9.38□□□□□ -0.91
PDGFC-205ENST00000506880 DMP1Q13316 513 aaPredicted RBP9.38□□□□□ -0.91
PDGFC-205ENST00000506880 KYAT1Q16773 422 aa9.38□□□□□ -0.91
PDGFC-205ENST00000506880 MTERF2Q49AM1 385 aa9.38□□□□□ -0.91
PDGFC-205ENST00000506880 PLEKHG4Q58EX7 1191 aa9.38□□□□□ -0.91
PDGFC-205ENST00000506880 CDCA2Q69YH5 1023 aaPredicted RBP9.38□□□□□ -0.91
PDGFC-205ENST00000506880 GPR153Q6NV75 609 aa9.38□□□□□ -0.91
PDGFC-205ENST00000506880 POTEGQ6S5H5 508 aa9.38□□□□□ -0.91
PDGFC-205ENST00000506880 STXBP4Q6ZWJ1 553 aa9.38□□□□□ -0.91
PDGFC-205ENST00000506880 C1orf186Q6ZWK4 172 aa9.38□□□□□ -0.91
PDGFC-205ENST00000506880 CEP57L1Q8IYX8 460 aa9.38□□□□□ -0.91
PDGFC-205ENST00000506880 METTL13Q8N6R0 699 aa9.38□□□□□ -0.91
PDGFC-205ENST00000506880 CNNM3Q8NE01 707 aa9.38□□□□□ -0.91
PDGFC-205ENST00000506880 HERVK_113Q902F9 699 aa9.38□□□□□ -0.91
PDGFC-205ENST00000506880 MRPS27Q92552 414 aaKnown RBP9.38□□□□□ -0.91
PDGFC-205ENST00000506880 DHX38Q92620 1227 aaKnown RBP9.38□□□□□ -0.91
PDGFC-205ENST00000506880 TRIM43Q96BQ3 446 aaPredicted RBP9.38□□□□□ -0.91
PDGFC-205ENST00000506880 BHMT2Q9H2M3 363 aa9.38□□□□□ -0.91
PDGFC-205ENST00000506880 TMEM134Q9H6X4 195 aa9.38□□□□□ -0.91
PDGFC-205ENST00000506880 OLFML3Q9NRN5 406 aa9.38□□□□□ -0.91
PDGFC-205ENST00000506880 SUCLA2Q9P2R7 463 aaPredicted RBP9.38□□□□□ -0.91
PDGFC-205ENST00000506880 WRAP73Q9P2S5 460 aaPredicted RBP9.38□□□□□ -0.91
PDGFC-205ENST00000506880 TFIP11Q9UBB9 837 aaKnown RBP9.38□□□□□ -0.91
PDGFC-205ENST00000506880 KCNH3Q9ULD8 1083 aa9.38□□□□□ -0.91
PDGFC-205ENST00000506880 HPSEQ9Y251 543 aa9.38□□□□□ -0.91
PDGFC-205ENST00000506880 TMEM265A0A087WTH1 108 aa9.37□□□□□ -0.91
PDGFC-205ENST00000506880 PVALEFA0A1B0GWK0 134 aa9.37□□□□□ -0.91
PDGFC-205ENST00000506880 HOXA2O43364 376 aa9.37□□□□□ -0.91
PDGFC-205ENST00000506880 DTNBO60941 627 aa9.37□□□□□ -0.91
PDGFC-205ENST00000506880 GPR32O75388 356 aa9.37□□□□□ -0.91
PDGFC-205ENST00000506880 DARSP14868 501 aaKnown RBP9.37□□□□□ -0.91
PDGFC-205ENST00000506880 PLCG1P19174 1290 aa9.37□□□□□ -0.91
PDGFC-205ENST00000506880 NCLP19338 710 aaKnown RBP9.37□□□□□ -0.91
PDGFC-205ENST00000506880 PTGS1P23219 599 aa9.37□□□□□ -0.91
PDGFC-205ENST00000506880 RAB27AP51159 221 aa9.37□□□□□ -0.91
PDGFC-205ENST00000506880 PTENP60484 403 aa9.37□□□□□ -0.91
PDGFC-205ENST00000506880 UBE2HP62256 183 aa9.37□□□□□ -0.91
PDGFC-205ENST00000506880 IKBKEQ14164 716 aa9.37□□□□□ -0.91
PDGFC-205ENST00000506880 FBXO47Q5MNV8 452 aa9.37□□□□□ -0.91
PDGFC-205ENST00000506880 ZNF618Q5T7W0 954 aa9.37□□□□□ -0.91
PDGFC-205ENST00000506880 RINT1Q6NUQ1 792 aa9.37□□□□□ -0.91
PDGFC-205ENST00000506880 TRAF7Q6Q0C0 670 aa9.37□□□□□ -0.91
PDGFC-205ENST00000506880 ZBTB8OSQ8IWT0 167 aa9.37□□□□□ -0.91
PDGFC-205ENST00000506880 SPRYD3Q8NCJ5 442 aa9.37□□□□□ -0.91
PDGFC-205ENST00000506880 DNAJB3Q8WWF6 145 aa9.37□□□□□ -0.91
PDGFC-205ENST00000506880 GJA10Q969M2 543 aa9.37□□□□□ -0.91
PDGFC-205ENST00000506880 CCDC47Q96A33 483 aaKnown RBP9.37□□□□□ -0.91
PDGFC-205ENST00000506880 PNMA5Q96PV4 448 aa9.37□□□□□ -0.91
PDGFC-205ENST00000506880 TSPAN18Q96SJ8 248 aa9.37□□□□□ -0.91
PDGFC-205ENST00000506880 SLC9A7Q96T83 725 aa9.37□□□□□ -0.91
PDGFC-205ENST00000506880 ADAMTS10Q9H324 1103 aa9.37□□□□□ -0.91
PDGFC-205ENST00000506880 ELAC1Q9H777 363 aaKnown RBP9.37□□□□□ -0.91
PDGFC-205ENST00000506880 PARVGQ9HBI0 331 aa9.37□□□□□ -0.91
PDGFC-205ENST00000506880 PRMT7Q9NVM4 692 aaPredicted RBP9.37□□□□□ -0.91
PDGFC-205ENST00000506880 CGNQ9P2M7 1197 aaKnown RBP9.37□□□□□ -0.91
PDGFC-205ENST00000506880 AKT3Q9Y243 479 aa9.37□□□□□ -0.91
PDGFC-205ENST00000506880 CDY2AQ9Y6F7 541 aa9.37□□□□□ -0.91
PDGFC-205ENST00000506880 SIP14410 1827 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms