RNA–Protein interactions for RNA: ENST00000504557.1

HOXC9-202, Transcript of homeobox C9, humanhuman

TSL 3

Gene HOXC9, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-202ENST00000504557 NPAS4Q8IUM7 802 aa15.95■□□□□ 0.14
HOXC9-202ENST00000504557 NOSTRINQ8IVI9 506 aa15.95■□□□□ 0.14
HOXC9-202ENST00000504557 KSR1Q8IVT5 923 aa15.95■□□□□ 0.14
HOXC9-202ENST00000504557 TMEM192Q8IY95 271 aa15.95■□□□□ 0.14
HOXC9-202ENST00000504557 RNF169Q8NCN4 708 aa15.95■□□□□ 0.14
HOXC9-202ENST00000504557 TMEM143Q96AN5 459 aa15.95■□□□□ 0.14
HOXC9-202ENST00000504557 CCDC43Q96MW1 224 aaKnown RBP15.95■□□□□ 0.14
HOXC9-202ENST00000504557 ADAMTS10Q9H324 1103 aa15.95■□□□□ 0.14
HOXC9-202ENST00000504557 FOXP1Q9H334 677 aaPredicted RBP15.95■□□□□ 0.14
HOXC9-202ENST00000504557 PCDHB7Q9Y5E2 793 aa15.95■□□□□ 0.14
HOXC9-202ENST00000504557 A0A087WZ62 844 aa15.94■□□□□ 0.14
HOXC9-202ENST00000504557 DLL1O00548 723 aa15.94■□□□□ 0.14
HOXC9-202ENST00000504557 MAFO75444 373 aaPredicted RBP15.94■□□□□ 0.14
HOXC9-202ENST00000504557 GJB2P29033 226 aa15.94■□□□□ 0.14
HOXC9-202ENST00000504557 TECP42680 631 aa15.94■□□□□ 0.14
HOXC9-202ENST00000504557 GPM6BQ13491 265 aa15.94■□□□□ 0.14
HOXC9-202ENST00000504557 SLC7A3Q8WY07 619 aa15.94■□□□□ 0.14
HOXC9-202ENST00000504557 CEP89Q96ST8 783 aa15.94■□□□□ 0.14
HOXC9-202ENST00000504557 FDXACB1Q9BRP7 624 aaPredicted RBP15.94■□□□□ 0.14
HOXC9-202ENST00000504557 ZSWIM4Q9H7M6 989 aa15.94■□□□□ 0.14
HOXC9-202ENST00000504557 NOL7Q9UMY1 257 aaKnown RBP15.94■□□□□ 0.14
HOXC9-202ENST00000504557 COL4A6Q14031 1691 aa15.94■□□□□ 0.14
HOXC9-202ENST00000504557 UNC80Q8N2C7 3258 aa15.94■□□□□ 0.14
HOXC9-202ENST00000504557 TRANK1O15050 2925 aa15.94■□□□□ 0.14
HOXC9-202ENST00000504557 PLXNA4Q9HCM2 1894 aa15.93■□□□□ 0.14
HOXC9-202ENST00000504557 TBKBP1A7MCY6 615 aa15.93■□□□□ 0.14
HOXC9-202ENST00000504557 DGKIO75912 1065 aa15.93■□□□□ 0.14
HOXC9-202ENST00000504557 SRGAP2CP0DJJ0 459 aa15.93■□□□□ 0.14
HOXC9-202ENST00000504557 ZSCAN20P17040 1043 aaPredicted RBP15.93■□□□□ 0.14
HOXC9-202ENST00000504557 EIF4BP23588 611 aaKnown RBP15.93■□□□□ 0.14
HOXC9-202ENST00000504557 SARSP49591 514 aaKnown RBP15.93■□□□□ 0.14
HOXC9-202ENST00000504557 SPOUT1Q5T280 376 aaKnown RBP15.93■□□□□ 0.14
HOXC9-202ENST00000504557 OTUD6AQ7L8S5 288 aa15.93■□□□□ 0.14
HOXC9-202ENST00000504557 C4orf19Q8IY42 314 aa15.93■□□□□ 0.14
HOXC9-202ENST00000504557 MTMR9Q96QG7 549 aa15.93■□□□□ 0.14
HOXC9-202ENST00000504557 GCOM2Q9BZD3 368 aaPredicted RBP15.93■□□□□ 0.14
HOXC9-202ENST00000504557 THEGQ9P2T0 379 aa15.93■□□□□ 0.14
HOXC9-202ENST00000504557 KIF3AQ9Y496 699 aa15.93■□□□□ 0.14
HOXC9-202ENST00000504557 GTF3C3Q9Y5Q9 886 aa15.93■□□□□ 0.14
HOXC9-202ENST00000504557 MRPL42Q9Y6G3 142 aaKnown RBP15.93■□□□□ 0.14
HOXC9-202ENST00000504557 REV3LO60673 3130 aa15.93■□□□□ 0.14
HOXC9-202ENST00000504557 H3BQV1 296 aa15.92■□□□□ 0.14
HOXC9-202ENST00000504557 SLITRK3O94933 977 aa15.92■□□□□ 0.14
HOXC9-202ENST00000504557 OR52Z1P0C646 297 aa15.92■□□□□ 0.14
HOXC9-202ENST00000504557 FGFR1P11362 822 aa15.92■□□□□ 0.14
HOXC9-202ENST00000504557 DARSP14868 501 aaKnown RBP15.92■□□□□ 0.14
HOXC9-202ENST00000504557 EMC2Q15006 297 aa15.92■□□□□ 0.14
HOXC9-202ENST00000504557 FAM102BQ5T8I3 360 aa15.92■□□□□ 0.14
HOXC9-202ENST00000504557 SLC24A5Q71RS6 500 aa15.92■□□□□ 0.14
HOXC9-202ENST00000504557 PIGOQ8TEQ8 1089 aa15.92■□□□□ 0.14
HOXC9-202ENST00000504557 JPH2Q9BR39 696 aaPredicted RBP15.92■□□□□ 0.14
HOXC9-202ENST00000504557 RGS18Q9NS28 235 aa15.92■□□□□ 0.14
HOXC9-202ENST00000504557 C1orf112Q9NSG2 853 aa15.92■□□□□ 0.14
HOXC9-202ENST00000504557 SMC3Q9UQE7 1217 aa15.92■□□□□ 0.14
HOXC9-202ENST00000504557 BRWD1Q9NSI6 2320 aa15.91■□□□□ 0.14
HOXC9-202ENST00000504557 IGKV6-21A0A0C4DH24 114 aa15.91■□□□□ 0.14
HOXC9-202ENST00000504557 C9IYK1 514 aa15.91■□□□□ 0.14
HOXC9-202ENST00000504557 RFC5P40937 340 aa15.91■□□□□ 0.14
HOXC9-202ENST00000504557 TFF2Q03403 129 aa15.91■□□□□ 0.14
HOXC9-202ENST00000504557 LONRF3Q496Y0 759 aa15.91■□□□□ 0.14
HOXC9-202ENST00000504557 PRPF31Q8WWY3 499 aaKnown RBP15.91■□□□□ 0.14
HOXC9-202ENST00000504557 ZNF689Q96CS4 500 aaPredicted RBP15.91■□□□□ 0.14
HOXC9-202ENST00000504557 SAMD11Q96NU1 681 aa15.91■□□□□ 0.14
HOXC9-202ENST00000504557 MTRQ99707 1265 aa15.91■□□□□ 0.14
HOXC9-202ENST00000504557 RC3H2Q9HBD1 1191 aaKnown RBP15.91■□□□□ 0.14
HOXC9-202ENST00000504557 HCSTQ9UBK5 93 aa15.91■□□□□ 0.14
HOXC9-202ENST00000504557 COL4A3BPQ9Y5P4 624 aa15.91■□□□□ 0.14
HOXC9-202ENST00000504557 BMPR1AP36894 532 aa15.9■□□□□ 0.14
HOXC9-202ENST00000504557 MCM2P49736 904 aa15.9■□□□□ 0.14
HOXC9-202ENST00000504557 DSC3Q14574 896 aa15.9■□□□□ 0.14
HOXC9-202ENST00000504557 EP400NLQ6ZTU2 488 aa15.9■□□□□ 0.14
HOXC9-202ENST00000504557 MAEAQ7L5Y9 396 aa15.9■□□□□ 0.14
HOXC9-202ENST00000504557 CATSPER4Q7RTX7 472 aa15.9■□□□□ 0.14
HOXC9-202ENST00000504557 CMTR2Q8IYT2 770 aaKnown RBP15.9■□□□□ 0.14
HOXC9-202ENST00000504557 NEK9Q8TD19 979 aa15.9■□□□□ 0.14
HOXC9-202ENST00000504557 PSPC1Q8WXF1 523 aaKnown RBP15.9■□□□□ 0.14
HOXC9-202ENST00000504557 HSD17B14Q9BPX1 270 aa15.9■□□□□ 0.14
HOXC9-202ENST00000504557 DHX33Q9H6R0 707 aaKnown RBP15.9■□□□□ 0.14
HOXC9-202ENST00000504557 ATP6V0A4Q9HBG4 840 aa15.9■□□□□ 0.14
HOXC9-202ENST00000504557 ALG13Q9NP73 1137 aaKnown RBP15.9■□□□□ 0.14
HOXC9-202ENST00000504557 PIN4Q9Y237 131 aaKnown RBP15.9■□□□□ 0.14
HOXC9-202ENST00000504557 PCDHB6Q9Y5E3 794 aa15.9■□□□□ 0.14
HOXC9-202ENST00000504557 H3BNC9 293 aa15.89■□□□□ 0.13
HOXC9-202ENST00000504557 USO1O60763 962 aaKnown RBP15.89■□□□□ 0.13
HOXC9-202ENST00000504557 MED24O75448 989 aa15.89■□□□□ 0.13
HOXC9-202ENST00000504557 POU3F3P20264 500 aaPredicted RBP15.89■□□□□ 0.13
HOXC9-202ENST00000504557 SFPQP23246 707 aaKnown RBP eCLIP15.89■□□□□ 0.13
HOXC9-202ENST00000504557 TOB1P50616 345 aaPredicted RBP15.89■□□□□ 0.13
HOXC9-202ENST00000504557 LAMTOR4Q0VGL1 99 aa15.89■□□□□ 0.13
HOXC9-202ENST00000504557 PTPROQ16827 1216 aa15.89■□□□□ 0.13
HOXC9-202ENST00000504557 TWF2Q6IBS0 349 aaKnown RBP15.89■□□□□ 0.13
HOXC9-202ENST00000504557 POTEGQ6S5H5 508 aa15.89■□□□□ 0.13
HOXC9-202ENST00000504557 CRIPAKQ8N1N5 446 aa15.89■□□□□ 0.13
HOXC9-202ENST00000504557 ZNF710Q8N1W2 664 aa15.89■□□□□ 0.13
HOXC9-202ENST00000504557 IL27Q8NEV9 243 aa15.89■□□□□ 0.13
HOXC9-202ENST00000504557 COL25A1Q9BXS0 654 aaPredicted RBP15.89■□□□□ 0.13
HOXC9-202ENST00000504557 BACH2Q9BYV9 841 aa15.89■□□□□ 0.13
HOXC9-202ENST00000504557 GRM6O15303 877 aa15.88■□□□□ 0.13
HOXC9-202ENST00000504557 U2AF2P26368 475 aaKnown RBP eCLIP15.88■□□□□ 0.13
HOXC9-202ENST00000504557 CDC42EP1Q00587 391 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms