RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 SAMM50Q9Y512 469 aa15.06■□□□□ 0
VCP-207ENST00000493886 PCDHB13Q9Y5F0 798 aa15.06■□□□□ 0
VCP-207ENST00000493886 PARP14Q460N5 1801 aa15.06■□□□□ 0
VCP-207ENST00000493886 HIP1RO75146 1068 aa15.06■□□□□ 0
VCP-207ENST00000493886 MYBL2P10244 700 aa15.06■□□□□ 0
VCP-207ENST00000493886 MAGEA1P43355 309 aa15.06■□□□□ 0
VCP-207ENST00000493886 NFIL3Q16649 462 aa15.06■□□□□ 0
VCP-207ENST00000493886 TCERG1LQ5VWI1 586 aa15.06■□□□□ 0
VCP-207ENST00000493886 PAPD7Q5XG87 772 aaKnown RBP15.06■□□□□ 0
VCP-207ENST00000493886 ICE2Q659A1 982 aa15.06■□□□□ 0
VCP-207ENST00000493886 FOXR1Q6PIV2 292 aa15.06■□□□□ 0
VCP-207ENST00000493886 PADI6Q6TGC4 694 aa15.06■□□□□ 0
VCP-207ENST00000493886 TRPM4Q8TD43 1214 aa15.06■□□□□ 0
VCP-207ENST00000493886 PDCD2LQ9BRP1 358 aa15.06■□□□□ 0
VCP-207ENST00000493886 MLXIPQ9HAP2 919 aa15.06■□□□□ 0
VCP-207ENST00000493886 PXMP2Q9NR77 195 aa15.06■□□□□ 0
VCP-207ENST00000493886 TBC1D22BQ9NU19 505 aa15.06■□□□□ 0
VCP-207ENST00000493886 LCMT1Q9UIC8 334 aa15.06■□□□□ 0
VCP-207ENST00000493886 ZHX2Q9Y6X8 837 aa15.06■□□□□ 0
VCP-207ENST00000493886 MYH11P35749 1972 aa15.06■□□□□ 0
VCP-207ENST00000493886 GFPT1Q06210 699 aaPredicted RBP15.05■□□□□ 0
VCP-207ENST00000493886 MAPK7Q13164 816 aa15.05■□□□□ 0
VCP-207ENST00000493886 RAPGEF1Q13905 1077 aa15.05■□□□□ 0
VCP-207ENST00000493886 EXOC3L4Q17RC7 722 aa15.05■□□□□ 0
VCP-207ENST00000493886 ANKRD13CQ8N6S4 541 aa15.05■□□□□ 0
VCP-207ENST00000493886 SLC35C1Q96A29 364 aa15.05■□□□□ 0
VCP-207ENST00000493886 PLCB1Q9NQ66 1216 aa15.05■□□□□ 0
VCP-207ENST00000493886 RNF146Q9NTX7 359 aa15.05■□□□□ 0
VCP-207ENST00000493886 RIPK3Q9Y572 518 aa15.05■□□□□ 0
VCP-207ENST00000493886 ACTN1P12814 892 aa15.05■□□□□ -0
VCP-207ENST00000493886 SLC9A1P19634 815 aa15.05■□□□□ -0
VCP-207ENST00000493886 CXCR5P32302 372 aa15.05■□□□□ -0
VCP-207ENST00000493886 DNA2P51530 1060 aa15.05■□□□□ -0
VCP-207ENST00000493886 HMGCS2P54868 508 aa15.05■□□□□ -0
VCP-207ENST00000493886 DPY19L2P1Q6NXN4 242 aa15.05■□□□□ -0
VCP-207ENST00000493886 DAW1Q8N136 415 aa15.05■□□□□ -0
VCP-207ENST00000493886 EHD2Q9NZN4 543 aa15.05■□□□□ -0
VCP-207ENST00000493886 ANO9A1A5B4 782 aa15.04■□□□□ -0
VCP-207ENST00000493886 QARSP47897 775 aaKnown RBP15.04■□□□□ -0
VCP-207ENST00000493886 TUBB4BP68371 445 aa15.04■□□□□ -0
VCP-207ENST00000493886 COG2Q14746 738 aa15.04■□□□□ -0
VCP-207ENST00000493886 ARHGEF16Q5VV41 709 aa15.04■□□□□ -0
VCP-207ENST00000493886 HS2ST1Q7LGA3 356 aa15.04■□□□□ -0
VCP-207ENST00000493886 NLGN2Q8NFZ4 835 aa15.04■□□□□ -0
VCP-207ENST00000493886 GBP3Q9H0R5 595 aa15.04■□□□□ -0
VCP-207ENST00000493886 FAM204AQ9H8W3 233 aa15.04■□□□□ -0
VCP-207ENST00000493886 AIPL1Q9NZN9 384 aa15.04■□□□□ -0
VCP-207ENST00000493886 CAPN6Q9Y6Q1 641 aa15.04■□□□□ -0
VCP-207ENST00000493886 RBAK-RBAKDNI3L0D1 243 aa15.04■□□□□ -0
VCP-207ENST00000493886 PON1P27169 355 aa15.04■□□□□ -0
VCP-207ENST00000493886 PSMC2P35998 433 aaKnown RBP15.04■□□□□ -0
VCP-207ENST00000493886 BAATQ14032 418 aaPredicted RBP15.04■□□□□ -0
VCP-207ENST00000493886 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.04■□□□□ -0
VCP-207ENST00000493886 FAM186BQ8IYM0 893 aa15.04■□□□□ -0
VCP-207ENST00000493886 REPS2Q8NFH8 660 aa15.04■□□□□ -0
VCP-207ENST00000493886 TRIM58Q8NG06 486 aa15.04■□□□□ -0
VCP-207ENST00000493886 C12orf42Q96LP6 360 aa15.04■□□□□ -0
VCP-207ENST00000493886 DBR1Q9UK59 544 aaKnown RBP15.04■□□□□ -0
VCP-207ENST00000493886 PJA2O43164 708 aa15.03■□□□□ -0
VCP-207ENST00000493886 TACC1O75410 805 aa15.03■□□□□ -0
VCP-207ENST00000493886 KLHDC7AQ5VTJ3 777 aa15.03■□□□□ -0
VCP-207ENST00000493886 MAEAQ7L5Y9 396 aa15.03■□□□□ -0
VCP-207ENST00000493886 FAM133AQ8N9E0 248 aa15.03■□□□□ -0
VCP-207ENST00000493886 GGA3Q9NZ52 723 aa15.03■□□□□ -0
VCP-207ENST00000493886 ATP9AO75110 1047 aa15.03■□□□□ -0
VCP-207ENST00000493886 LYPLA2O95372 231 aa15.03■□□□□ -0
VCP-207ENST00000493886 UCHL3P15374 230 aa15.03■□□□□ -0
VCP-207ENST00000493886 RARRES1P49788 294 aa15.03■□□□□ -0
VCP-207ENST00000493886 ARID5AQ03989 594 aa15.03■□□□□ -0
VCP-207ENST00000493886 BIRC2Q13490 618 aa15.03■□□□□ -0
VCP-207ENST00000493886 ASIC2Q16515 512 aa15.03■□□□□ -0
VCP-207ENST00000493886 LEKR1Q6ZMV7 388 aa15.03■□□□□ -0
VCP-207ENST00000493886 GBP6Q6ZN66 633 aa15.03■□□□□ -0
VCP-207ENST00000493886 MKNK1Q9BUB5 465 aa15.03■□□□□ -0
VCP-207ENST00000493886 STRA6Q9BX79 667 aa15.03■□□□□ -0
VCP-207ENST00000493886 AGPAT3Q9NRZ7 376 aa15.03■□□□□ -0
VCP-207ENST00000493886 GPRC5DQ9NZD1 345 aa15.03■□□□□ -0
VCP-207ENST00000493886 RLFQ13129 1914 aa15.03■□□□□ -0
VCP-207ENST00000493886 TESPA1A2RU30 521 aaPredicted RBP15.03■□□□□ -0
VCP-207ENST00000493886 C19orf81C9J6K1 198 aa15.03■□□□□ -0
VCP-207ENST00000493886 ANKRD65E5RJM6 399 aa15.03■□□□□ -0
VCP-207ENST00000493886 TRIM66O15016 1216 aa15.03■□□□□ -0
VCP-207ENST00000493886 PPP1R12BO60237 982 aaPredicted RBP15.03■□□□□ -0
VCP-207ENST00000493886 RNF40O75150 1001 aa15.03■□□□□ -0
VCP-207ENST00000493886 PPP1R37O75864 691 aa15.03■□□□□ -0
VCP-207ENST00000493886 MOCS3O95396 460 aa15.03■□□□□ -0
VCP-207ENST00000493886 DSG3P32926 999 aa15.03■□□□□ -0
VCP-207ENST00000493886 KLHL30Q0D2K2 578 aa15.03■□□□□ -0
VCP-207ENST00000493886 SNRNP48Q6IEG0 339 aaKnown RBP15.03■□□□□ -0
VCP-207ENST00000493886 KLRG1Q96E93 195 aa15.03■□□□□ -0
VCP-207ENST00000493886 DMAC2Q9NW81 257 aa15.03■□□□□ -0
VCP-207ENST00000493886 COL11A1P12107 1806 aaPredicted RBP15.02■□□□□ -0
VCP-207ENST00000493886 PHIPQ8WWQ0 1821 aa15.02■□□□□ -0
VCP-207ENST00000493886 COG1Q8WTW3 980 aa15.02■□□□□ -0
VCP-207ENST00000493886 SPAG5Q96R06 1193 aa15.02■□□□□ -0
VCP-207ENST00000493886 LARSQ9P2J5 1176 aaKnown RBP15.02■□□□□ -0
VCP-207ENST00000493886 GTPBP10A4D1E9 387 aaKnown RBP15.02□□□□□ -0.01
VCP-207ENST00000493886 K7ENM7 598 aa15.02□□□□□ -0.01
VCP-207ENST00000493886 NCK2O43639 380 aa15.02□□□□□ -0.01
VCP-207ENST00000493886 YWHABP31946 246 aaKnown RBP15.02□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms