RNA–Protein interactions for RNA: ENST00000487825.5

BRCA1-217, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-217ENST00000487825 KCPQ6ZWJ8 1503 aa6.66□□□□□ -1.34
BRCA1-217ENST00000487825 EXOC5O00471 708 aa6.66□□□□□ -1.34
BRCA1-217ENST00000487825 MAFKO60675 156 aa6.66□□□□□ -1.34
BRCA1-217ENST00000487825 GRK2P25098 689 aa6.66□□□□□ -1.34
BRCA1-217ENST00000487825 GRK3P35626 688 aa6.66□□□□□ -1.34
BRCA1-217ENST00000487825 GPR85P60893 370 aa6.66□□□□□ -1.34
BRCA1-217ENST00000487825 KIZQ2M2Z5 673 aa6.66□□□□□ -1.34
BRCA1-217ENST00000487825 PRR31Q5SQ13 230 aa6.66□□□□□ -1.34
BRCA1-217ENST00000487825 PRAMEF18Q5VWM3 479 aa6.66□□□□□ -1.34
BRCA1-217ENST00000487825 STYK1Q6J9G0 422 aa6.66□□□□□ -1.34
BRCA1-217ENST00000487825 TMC5Q6UXY8 1006 aa6.66□□□□□ -1.34
BRCA1-217ENST00000487825 OTOP3Q7RTS5 596 aa6.66□□□□□ -1.34
BRCA1-217ENST00000487825 PRRT2Q7Z6L0 340 aaPredicted RBP6.66□□□□□ -1.34
BRCA1-217ENST00000487825 IFNL3Q8IZI9 196 aa6.66□□□□□ -1.34
BRCA1-217ENST00000487825 PHOSPHO1Q8TCT1 267 aa6.66□□□□□ -1.34
BRCA1-217ENST00000487825 CLEC4DQ8WXI8 215 aa6.66□□□□□ -1.34
BRCA1-217ENST00000487825 KRTAP4-11Q9BYQ6 195 aa6.66□□□□□ -1.34
BRCA1-217ENST00000487825 POGKQ9P215 609 aa6.66□□□□□ -1.34
BRCA1-217ENST00000487825 CROTQ9UKG9 612 aa6.66□□□□□ -1.34
BRCA1-217ENST00000487825 CCDC88AQ3V6T2 1871 aa6.66□□□□□ -1.34
BRCA1-217ENST00000487825 CPSF1Q10570 1443 aaKnown RBP6.66□□□□□ -1.34
BRCA1-217ENST00000487825 LTN1O94822 1766 aa6.65□□□□□ -1.34
BRCA1-217ENST00000487825 GNAT1P11488 350 aa6.65□□□□□ -1.34
BRCA1-217ENST00000487825 SSRP1Q08945 709 aaKnown RBP6.65□□□□□ -1.34
BRCA1-217ENST00000487825 COL23A1Q86Y22 540 aaPredicted RBP6.65□□□□□ -1.34
BRCA1-217ENST00000487825 TXNDC5Q8NBS9 432 aaKnown RBP6.65□□□□□ -1.34
BRCA1-217ENST00000487825 SMC1BQ8NDV3 1235 aa6.65□□□□□ -1.34
BRCA1-217ENST00000487825 ABHD8Q96I13 439 aa6.65□□□□□ -1.34
BRCA1-217ENST00000487825 CLIC6Q96NY7 704 aa6.65□□□□□ -1.34
BRCA1-217ENST00000487825 CDC6Q99741 560 aa6.65□□□□□ -1.34
BRCA1-217ENST00000487825 WASF3Q9UPY6 502 aa6.65□□□□□ -1.34
BRCA1-217ENST00000487825 TRAF6Q9Y4K3 522 aa6.65□□□□□ -1.34
BRCA1-217ENST00000487825 CCDC7Q96M83 1385 aa6.65□□□□□ -1.35
BRCA1-217ENST00000487825 TIAM2Q8IVF5 1701 aa6.64□□□□□ -1.35
BRCA1-217ENST00000487825 NKRFO15226 690 aaKnown RBP eCLIP6.64□□□□□ -1.35
BRCA1-217ENST00000487825 FOXN1O15353 648 aa6.64□□□□□ -1.35
BRCA1-217ENST00000487825 ADCY3O60266 1144 aa6.64□□□□□ -1.35
BRCA1-217ENST00000487825 LTFP02788 710 aa6.64□□□□□ -1.35
BRCA1-217ENST00000487825 SOD2P04179 222 aa6.64□□□□□ -1.35
BRCA1-217ENST00000487825 IL13P35225 146 aa6.64□□□□□ -1.35
BRCA1-217ENST00000487825 SPIRE1Q08AE8 756 aa6.64□□□□□ -1.35
BRCA1-217ENST00000487825 TUSC3Q13454 348 aa6.64□□□□□ -1.35
BRCA1-217ENST00000487825 RASGRF1Q13972 1273 aa6.64□□□□□ -1.35
BRCA1-217ENST00000487825 TRIM48Q8IWZ4 208 aa6.64□□□□□ -1.35
BRCA1-217ENST00000487825 ZNF669Q96BR6 464 aaPredicted RBP6.64□□□□□ -1.35
BRCA1-217ENST00000487825 ZFYVE21Q9BQ24 234 aa6.64□□□□□ -1.35
BRCA1-217ENST00000487825 C4BP0C0L5 1744 aa6.64□□□□□ -1.35
BRCA1-217ENST00000487825 MROH6A6NGR9 719 aa6.63□□□□□ -1.35
BRCA1-217ENST00000487825 DIAPH1O60610 1272 aaKnown RBP6.63□□□□□ -1.35
BRCA1-217ENST00000487825 ACEP12821 1306 aa6.63□□□□□ -1.35
BRCA1-217ENST00000487825 KIAA2012Q0VF49 1180 aa6.63□□□□□ -1.35
BRCA1-217ENST00000487825 FAM209AQ5JX71 171 aa6.63□□□□□ -1.35
BRCA1-217ENST00000487825 FAM26FQ5R3K3 315 aa6.63□□□□□ -1.35
BRCA1-217ENST00000487825 PHF19Q5T6S3 580 aa6.63□□□□□ -1.35
BRCA1-217ENST00000487825 FOXB2Q5VYV0 432 aa6.63□□□□□ -1.35
BRCA1-217ENST00000487825 CYP4F22Q6NT55 531 aa6.63□□□□□ -1.35
BRCA1-217ENST00000487825 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.63□□□□□ -1.35
BRCA1-217ENST00000487825 CCDC113Q9H0I3 377 aa6.63□□□□□ -1.35
BRCA1-217ENST00000487825 IPPKQ9H8X2 491 aa6.63□□□□□ -1.35
BRCA1-217ENST00000487825 L2HGDHQ9H9P8 463 aa6.63□□□□□ -1.35
BRCA1-217ENST00000487825 FAM208AQ9UK61 1670 aaKnown RBP6.63□□□□□ -1.35
BRCA1-217ENST00000487825 KDM2BQ8NHM5 1336 aa6.62□□□□□ -1.35
BRCA1-217ENST00000487825 FAM47E-STBD1D6RA91 191 aa6.62□□□□□ -1.35
BRCA1-217ENST00000487825 CYP1A1P04798 512 aaPredicted RBP6.62□□□□□ -1.35
BRCA1-217ENST00000487825 ZNF28P17035 718 aa6.62□□□□□ -1.35
BRCA1-217ENST00000487825 MLLT6P55198 1093 aaPredicted RBP6.62□□□□□ -1.35
BRCA1-217ENST00000487825 FAM124AQ86V42 546 aa6.62□□□□□ -1.35
BRCA1-217ENST00000487825 SCUBE1Q8IWY4 988 aa6.62□□□□□ -1.35
BRCA1-217ENST00000487825 TMEM209Q96SK2 561 aa6.62□□□□□ -1.35
BRCA1-217ENST00000487825 ALG1Q9BT22 464 aa6.62□□□□□ -1.35
BRCA1-217ENST00000487825 SIRPGQ9P1W8 387 aa6.62□□□□□ -1.35
BRCA1-217ENST00000487825 DSEQ9UL01 958 aa6.62□□□□□ -1.35
BRCA1-217ENST00000487825 NFAT5O94916 1531 aa6.61□□□□□ -1.35
BRCA1-217ENST00000487825 NSD2O96028 1365 aa6.61□□□□□ -1.35
BRCA1-217ENST00000487825 TRBV23-1A0A0A0MS06 115 aa6.61□□□□□ -1.35
BRCA1-217ENST00000487825 FAM153BP0C7A2 387 aa6.61□□□□□ -1.35
BRCA1-217ENST00000487825 CTCFP49711 727 aaPredicted RBP6.61□□□□□ -1.35
BRCA1-217ENST00000487825 NBPF6Q5VWK0 638 aa6.61□□□□□ -1.35
BRCA1-217ENST00000487825 DPH6Q7L8W6 267 aa6.61□□□□□ -1.35
BRCA1-217ENST00000487825 ZBTB38Q8NAP3 1195 aaPredicted RBP6.61□□□□□ -1.35
BRCA1-217ENST00000487825 UHMK1Q8TAS1 419 aaKnown RBP6.61□□□□□ -1.35
BRCA1-217ENST00000487825 LCORQ96JN0 433 aaPredicted RBP6.61□□□□□ -1.35
BRCA1-217ENST00000487825 NBPF4Q96M43 638 aa6.61□□□□□ -1.35
BRCA1-217ENST00000487825 IPO9Q96P70 1041 aaKnown RBP6.61□□□□□ -1.35
BRCA1-217ENST00000487825 INVSQ9Y283 1065 aa6.61□□□□□ -1.35
BRCA1-217ENST00000487825 TELO2Q9Y4R8 837 aa6.61□□□□□ -1.35
BRCA1-217ENST00000487825 K7ESM1 405 aa6.6□□□□□ -1.35
BRCA1-217ENST00000487825 VASNQ6EMK4 673 aa6.6□□□□□ -1.35
BRCA1-217ENST00000487825 TRMT10BQ6PF06 316 aaKnown RBP6.6□□□□□ -1.35
BRCA1-217ENST00000487825 BORAQ6PGQ7 559 aa6.6□□□□□ -1.35
BRCA1-217ENST00000487825 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.6□□□□□ -1.35
BRCA1-217ENST00000487825 MTDHQ86UE4 582 aaKnown RBP6.6□□□□□ -1.35
BRCA1-217ENST00000487825 PROSER1Q86XN7 944 aa6.6□□□□□ -1.35
BRCA1-217ENST00000487825 LGI4Q8N135 537 aa6.6□□□□□ -1.35
BRCA1-217ENST00000487825 TTLL11Q8NHH1 800 aa6.6□□□□□ -1.35
BRCA1-217ENST00000487825 ZCCHC14Q8WYQ9 949 aaKnown RBP6.6□□□□□ -1.35
BRCA1-217ENST00000487825 KRTAP9-3Q9BYQ3 159 aa6.6□□□□□ -1.35
BRCA1-217ENST00000487825 TMEM168Q9H0V1 697 aa6.6□□□□□ -1.35
BRCA1-217ENST00000487825 NUB1Q9Y5A7 615 aa6.6□□□□□ -1.35
BRCA1-217ENST00000487825 PCDHA8Q9Y5H6 950 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms