RNA–Protein interactions for RNA: ENST00000486060.1

CCHCR1-214, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-214ENST00000486060 C9IYK1 514 aa18.63■□□□□ 0.57
CCHCR1-214ENST00000486060 SPATA31C1P0DKV0 1188 aa18.63■□□□□ 0.57
CCHCR1-214ENST00000486060 DARSP14868 501 aaKnown RBP18.63■□□□□ 0.57
CCHCR1-214ENST00000486060 EIF4BP23588 611 aaKnown RBP18.63■□□□□ 0.57
CCHCR1-214ENST00000486060 GJB2P29033 226 aa18.63■□□□□ 0.57
CCHCR1-214ENST00000486060 YWHABP31946 246 aaKnown RBP18.63■□□□□ 0.57
CCHCR1-214ENST00000486060 TTC38Q5R3I4 469 aa18.63■□□□□ 0.57
CCHCR1-214ENST00000486060 TPH2Q8IWU9 490 aa18.63■□□□□ 0.57
CCHCR1-214ENST00000486060 IL27Q8NEV9 243 aa18.63■□□□□ 0.57
CCHCR1-214ENST00000486060 CEP170P1Q96L14 293 aa18.63■□□□□ 0.57
CCHCR1-214ENST00000486060 ZSWIM4Q9H7M6 989 aa18.63■□□□□ 0.57
CCHCR1-214ENST00000486060 RGS18Q9NS28 235 aa18.63■□□□□ 0.57
CCHCR1-214ENST00000486060 BMP2KQ9NSY1 1161 aaPredicted RBP18.63■□□□□ 0.57
CCHCR1-214ENST00000486060 ADGRA3Q8IWK6 1321 aa18.63■□□□□ 0.57
CCHCR1-214ENST00000486060 A0A087WZ62 844 aa18.62■□□□□ 0.57
CCHCR1-214ENST00000486060 GPR182O15218 404 aa18.62■□□□□ 0.57
CCHCR1-214ENST00000486060 LYPLA2O95372 231 aa18.62■□□□□ 0.57
CCHCR1-214ENST00000486060 MCM2P49736 904 aa18.62■□□□□ 0.57
CCHCR1-214ENST00000486060 EPC2Q52LR7 807 aa18.62■□□□□ 0.57
CCHCR1-214ENST00000486060 NPAS4Q8IUM7 802 aa18.62■□□□□ 0.57
CCHCR1-214ENST00000486060 FDXACB1Q9BRP7 624 aaPredicted RBP18.62■□□□□ 0.57
CCHCR1-214ENST00000486060 XPNPEP1Q9NQW7 623 aa18.62■□□□□ 0.57
CCHCR1-214ENST00000486060 SUCLA2Q9P2R7 463 aaPredicted RBP18.62■□□□□ 0.57
CCHCR1-214ENST00000486060 PCDHB6Q9Y5E3 794 aa18.62■□□□□ 0.57
CCHCR1-214ENST00000486060 DKC1O60832 514 aaKnown RBP eCLIP18.61■□□□□ 0.57
CCHCR1-214ENST00000486060 MED24O75448 989 aa18.61■□□□□ 0.57
CCHCR1-214ENST00000486060 OR52Z1P0C646 297 aa18.61■□□□□ 0.57
CCHCR1-214ENST00000486060 SARSP49591 514 aaKnown RBP18.61■□□□□ 0.57
CCHCR1-214ENST00000486060 FAM189BP81408 668 aa18.61■□□□□ 0.57
CCHCR1-214ENST00000486060 TMEM192Q8IY95 271 aa18.61■□□□□ 0.57
CCHCR1-214ENST00000486060 MICALL1Q8N3F8 863 aa18.61■□□□□ 0.57
CCHCR1-214ENST00000486060 TMEM143Q96AN5 459 aa18.61■□□□□ 0.57
CCHCR1-214ENST00000486060 IBSPP21815 317 aaPredicted RBP18.6■□□□□ 0.57
CCHCR1-214ENST00000486060 TECP42680 631 aa18.6■□□□□ 0.57
CCHCR1-214ENST00000486060 TRAPPC10P48553 1259 aa18.6■□□□□ 0.57
CCHCR1-214ENST00000486060 ORC2Q13416 577 aaPredicted RBP18.6■□□□□ 0.57
CCHCR1-214ENST00000486060 CUL4AQ13619 759 aa18.6■□□□□ 0.57
CCHCR1-214ENST00000486060 XKR9Q5GH70 373 aa18.6■□□□□ 0.57
CCHCR1-214ENST00000486060 RHPN2Q8IUC4 686 aa18.6■□□□□ 0.57
CCHCR1-214ENST00000486060 FIBCD1Q8N539 461 aa18.6■□□□□ 0.57
CCHCR1-214ENST00000486060 FBXO22Q8NEZ5 403 aa18.6■□□□□ 0.57
CCHCR1-214ENST00000486060 NLRP7Q8WX94 980 aa18.6■□□□□ 0.57
CCHCR1-214ENST00000486060 CLP1Q92989 425 aaKnown RBP18.6■□□□□ 0.57
CCHCR1-214ENST00000486060 IFT122Q9HBG6 1241 aa18.6■□□□□ 0.57
CCHCR1-214ENST00000486060 RNF19AQ9NV58 838 aa18.6■□□□□ 0.57
CCHCR1-214ENST00000486060 MRPL42Q9Y6G3 142 aaKnown RBP18.6■□□□□ 0.57
CCHCR1-214ENST00000486060 MYH11P35749 1972 aa18.59■□□□□ 0.57
CCHCR1-214ENST00000486060 MYH15Q9Y2K3 1946 aa18.59■□□□□ 0.57
CCHCR1-214ENST00000486060 POLGP54098 1239 aaPredicted RBP18.59■□□□□ 0.57
CCHCR1-214ENST00000486060 GNL2Q13823 731 aaKnown RBP18.59■□□□□ 0.57
CCHCR1-214ENST00000486060 EMC2Q15006 297 aa18.59■□□□□ 0.57
CCHCR1-214ENST00000486060 PAN2Q504Q3 1202 aaKnown RBP18.59■□□□□ 0.57
CCHCR1-214ENST00000486060 ODR4Q5SWX8 454 aa18.59■□□□□ 0.57
CCHCR1-214ENST00000486060 FAM102BQ5T8I3 360 aa18.59■□□□□ 0.57
CCHCR1-214ENST00000486060 SLC24A5Q71RS6 500 aa18.59■□□□□ 0.57
CCHCR1-214ENST00000486060 CATSPER3Q86XQ3 398 aa18.59■□□□□ 0.57
CCHCR1-214ENST00000486060 ZNF710Q8N1W2 664 aa18.59■□□□□ 0.57
CCHCR1-214ENST00000486060 NEK9Q8TD19 979 aa18.59■□□□□ 0.57
CCHCR1-214ENST00000486060 PIGOQ8TEQ8 1089 aa18.59■□□□□ 0.57
CCHCR1-214ENST00000486060 C1orf112Q9NSG2 853 aa18.59■□□□□ 0.57
CCHCR1-214ENST00000486060 HCSTQ9UBK5 93 aa18.59■□□□□ 0.57
CCHCR1-214ENST00000486060 DENND3A2RUS2 1198 aa18.58■□□□□ 0.56
CCHCR1-214ENST00000486060 H3BNC9 293 aa18.58■□□□□ 0.56
CCHCR1-214ENST00000486060 RFC5P40937 340 aa18.58■□□□□ 0.56
CCHCR1-214ENST00000486060 RARRES1P49788 294 aa18.58■□□□□ 0.56
CCHCR1-214ENST00000486060 DNM2P50570 870 aa18.58■□□□□ 0.56
CCHCR1-214ENST00000486060 BTG3Q14201 252 aaPredicted RBP18.58■□□□□ 0.56
CCHCR1-214ENST00000486060 IL17AQ16552 155 aa18.58■□□□□ 0.56
CCHCR1-214ENST00000486060 ECM1Q16610 540 aa18.58■□□□□ 0.56
CCHCR1-214ENST00000486060 OTUD6AQ7L8S5 288 aa18.58■□□□□ 0.56
CCHCR1-214ENST00000486060 ZNF410Q86VK4 478 aa18.58■□□□□ 0.56
CCHCR1-214ENST00000486060 CMTR2Q8IYT2 770 aaKnown RBP18.58■□□□□ 0.56
CCHCR1-214ENST00000486060 PRPF31Q8WWY3 499 aaKnown RBP18.58■□□□□ 0.56
CCHCR1-214ENST00000486060 SLC7A3Q8WY07 619 aa18.58■□□□□ 0.56
CCHCR1-214ENST00000486060 NLRP4Q96MN2 994 aa18.58■□□□□ 0.56
CCHCR1-214ENST00000486060 SCLT1Q96NL6 688 aa18.58■□□□□ 0.56
CCHCR1-214ENST00000486060 SAMD11Q96NU1 681 aa18.58■□□□□ 0.56
CCHCR1-214ENST00000486060 MINDY3Q9H8M7 445 aa18.58■□□□□ 0.56
CCHCR1-214ENST00000486060 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.58■□□□□ 0.56
CCHCR1-214ENST00000486060 ANKEF1Q9NU02 776 aa18.58■□□□□ 0.56
CCHCR1-214ENST00000486060 NOL7Q9UMY1 257 aaKnown RBP18.58■□□□□ 0.56
CCHCR1-214ENST00000486060 SMC3Q9UQE7 1217 aa18.58■□□□□ 0.56
CCHCR1-214ENST00000486060 PPME1Q9Y570 386 aa18.58■□□□□ 0.56
CCHCR1-214ENST00000486060 COL4A3BPQ9Y5P4 624 aa18.58■□□□□ 0.56
CCHCR1-214ENST00000486060 C5orf67F2Z3F1 127 aa18.57■□□□□ 0.56
CCHCR1-214ENST00000486060 GTPBP6O43824 516 aaPredicted RBP18.57■□□□□ 0.56
CCHCR1-214ENST00000486060 STAG3L1P0CL83 205 aa18.57■□□□□ 0.56
CCHCR1-214ENST00000486060 FGFR1P11362 822 aa18.57■□□□□ 0.56
CCHCR1-214ENST00000486060 ATF7P17544 494 aaPredicted RBP18.57■□□□□ 0.56
CCHCR1-214ENST00000486060 BMPR1AP36894 532 aa18.57■□□□□ 0.56
CCHCR1-214ENST00000486060 PTGDRQ13258 359 aa18.57■□□□□ 0.56
CCHCR1-214ENST00000486060 JPH2Q9BR39 696 aaPredicted RBP18.57■□□□□ 0.56
CCHCR1-214ENST00000486060 GCOM2Q9BZD3 368 aaPredicted RBP18.57■□□□□ 0.56
CCHCR1-214ENST00000486060 TUFT1Q9NNX1 390 aa18.57■□□□□ 0.56
CCHCR1-214ENST00000486060 LMCD1Q9NZU5 365 aa18.57■□□□□ 0.56
CCHCR1-214ENST00000486060 PCDHB7Q9Y5E2 793 aa18.57■□□□□ 0.56
CCHCR1-214ENST00000486060 CTNNB1P35222 781 aa18.56■□□□□ 0.56
CCHCR1-214ENST00000486060 FXR2P51116 673 aaKnown RBP eCLIP18.56■□□□□ 0.56
CCHCR1-214ENST00000486060 LAMTOR4Q0VGL1 99 aa18.56■□□□□ 0.56
CCHCR1-214ENST00000486060 GPM6BQ13491 265 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms